Largest Matching Areas for Illumination and Occlusion Robust Face Recognition

In this paper, we introduce a novel approach to face recognition which simultaneously tackles three combined challenges: 1) uneven illumination; 2) partial occlusion; and 3) limited training data. The new approach performs lighting normalization, occlusion de-emphasis and finally face recognition, based on finding the largest matching area (LMA) at each point on the face, as opposed to traditional fixed-size local area-based approaches. Robustness is achieved with novel approaches for feature extraction, LMA-based face image comparison and unseen data modeling. On the extended YaleB and AR face databases for face identification, our method using only a single training image per person, outperforms other methods using a single training image, and matches or exceeds methods which require multiple training images. On the labeled faces in the wild face verification database, our method outperforms comparable unsupervised methods. We also show that the new method performs competitively even when the training images are corrupted.

Multiplexing with three-primer PCR for rapid and economical microsatellite validation.

The next generation sequencing revolution has enabled rapid discovery of genetic markers, however, development of fully functioning new markers still requires a long and costly process of marker validation. This study reports a rapid and economical approach for the validation and deployment of polymorphic microsatellite markers obtained from a 454 pyrosequencing library of Atlantic cod, Gadus morhua, Linnaeus 1758. Primers were designed from raw reads to amplify specific amplicon size ranges, allowing effective PCR multiplexing. Multiplexing was combined with a three-primer PCR approach using four universal tails to label amplicons with separate fluorochromes. A total of 192 primer pairs were tested, resulting in 73 polymorphic markers. Of these, 55 loci were combined in six multiplex panels each containing between six and eleven markers. Variability of the loci was assessed on G. morhua from the Celtic Sea (n 46) and the Scotian Shelf (n 46), two locations that have shown genetic differentiation in previous studies. Multilocus FST between the two samples was estimated at 0.067 (P 0.001). After three loci potentially under selection were excluded, the global FST was estimated at 0.043 (P 0.001). Our technique combines three- primer and multiplex PCR techniques, allowing simultaneous screening and validation of relatively large numbers of microsatellite loci.

From 'trailing wives' to the emergence of a 'trailing husbands' phenomenon: Retirement migration to rural areas

Migration and gender studies have focused on economically active heterogeneous couples and traditionally highlight a dominant male role in migration decision-making. The female partner is commonly portrayed as a 'trailing wife' or 'trailing mother' with the move found to have a negative effect on her employment prospects. Much less is known about if or how the balance of power shifts between husbands and wives when employment or career-motivated moves are removed from the decision-making process. This is analysed with reference to retirement migration to rural areas of the UK and involved interviews with both partners present. For this cohort of retired couples, and in common with the literature, migration during economically active life course stages demonstrates strong 'trailing wife' and 'trailing mother' tendencies. The male's decision to retire signalled the commencement of a retirement life course stage for the couple. However, in contrast to the earlier male dominated decision-making, retirement migration saw the emergence of a 'trailing husband' phenomenon. Wives appear to adapt most successfully to the new rural environment while many husbands found it difficult to adjust (at least initially) to the multiple life changes: moving from largely urban areas to a rural setting alongside exiting the workforce. The findings suggest that the role of leader/ follower changed during the course of these couples' lives together and in relation to their reasons for moving.

Validating the use of intrinsic markers in body feathers to identify inter‑individual differences in non‑breeding areas of northern fulmars

Many wildlife studies use chemical analyses to explore spatio-temporal variation in diet, migratory patterns and contaminant exposure. Intrinsic markers are particularly valuable for studying non-breeding marine predators, when direct methods of investigation are rarely feasible. However, any inferences regarding foraging ecology are dependent upon the time scale over which tissues such as feathers are formed. In this study, we validate the use of body feathers for studying non-breeding foraging patterns in a pelagic seabird, the northern fulmar. Analysis of carcasses of successfully breeding adult fulmars indicated that body feathers moulted between September and March, whereas analyses of carcasses and activity patterns suggested that wing feather and tail feather moult occurred during more restricted periods (September to October and September to January, respectively). By randomly sampling relevant body feathers, average values for individual birds were shown to be consistent. We also integrated chemical analyses of body feather with geolocation tracking data to demonstrate that analyses of δ13C and δ15N values successfully assigned 88 % of birds to one of two broad wintering regions used by breeding adult fulmars from a Scottish study colony. These data provide strong support for the use of body feathers as a tool for exploring non-breeding foraging patterns and diet in wide-ranging, pelagic seabirds.

Pine wilt disease: global issues, trade and economic impact

Pine wilt disease (PWD) is perhaps the most serious threat to pine forests worldwide. Since it´s discovery in the early XXth century by Japanese forest researchers, and the relationship with its causative agent, the pinewood nematode (PWN) Bursaphelenchus xylophilus, in the 1970s, PWD has wreaked havoc wherever it appears. Firstly in the Far East (Japan, China and Korea) and now, more recently in 1999, in the EU (Portugal). The forest sector in Portugal plays a major role in the Portuguese economy with a 12% contribution to the industrial gross domestic product, 3.2% of the gross domestic product, 10% of foreign trade and 5% of national employment. Maritime pine (Pinus pinaster) is one of the most important pine productions, and industrial activity, such as the production of wood and resin, as well as coastal protection associated with sand dunes. Also, stone pine (Pinus pinea) plays an important role in the economy with a share derived from the exports of high-quality pineon seed. Thus, the tremendous economical and ecological impact of the introduction of a pest and pathogen such as the PWN, although as far as is known, the only species susceptible to the nematode is maritime pine. Immediately following detection, the research team involved (Univ. Évora, INIAP) informed the national plant quarantine and forest authorities, which relayed the information to Brussels and the appropriate EU authorities. A task force (GANP), followed by a national program (PROLUNP) was established. Since then, national surveys have been taking place, involving MADRP (Ministry of Agriculture), the University of Évora and several private corporations (e.g. UNAC). Forest growers in the area are particularly interested and involved since the area owned by the growers organizations totals 700 000 ha, largely affected by PWD. Detection of the disease has led to serious consequences and restrictions regarding exploration and commercialization of wood. A precautionary phytosanitary strip, 3 km-wide, has been recently (2007) established surrounding the affected area. The Portuguese government, through its national program PROLUNP, has been deeply involved since 1999, and in conjunction with the EU (Permanent Phytosanitary Committee, and FVO) and committed to controlling this nematode and the potential spread to the rest of the country and to the rest of the EU. The global impact of the presence of Bursaphelenchus xylophilus or the threat of its introduction and the resulting pine wilt disease in forested areas in different parts of the world is of increasing concern economically. The concern is exacerbated by the prevailing debate on climate change and the putative impact this could have on the vulnerability of the world’s pine forests to this disease. The scientific and regulatory approach taken in different jurisdictions to the threat of pine wilt disease varies from country to country depending on the perceived vulnerability of their pine forests to the disease and/or to the economic cost due to lost trade in wood products. Much of the research surrounding pine wilt disease has been located in the northern hemisphere, especially in southern Europe and in the warmer, coastal, Asian countries. However, there is an increased focus on this problem also in those countries in the southern hemisphere where plantations of susceptible pine have been established over the years. The forestry sector in Australia and New Zealand are on “high alert” for this disease and are practicing strict quarantine procedures at all ports of entry for wood products. As well, there is heightened awareness, as there is worldwide, for the need to monitor wood packaging materials for all imported goods. In carrying out the necessary monitoring and assessment of products for B. xylophilus and its vectors substantial costs are incurred especially when decisions have to be made rapidly and regardless of whether the outcome is positive or negative. Australia’s response recently to the appearance of some dying pines in a plantation illustrated the high sensitivity of some countries to this disease. Some $200,000 was spent on the assessment in order to save a potential loss of millions of dollars to the disease. This rapid, co-ordinated response to the report was for naught, because once identified it was found not to be B. xylophilus. This illustrates the particular importance of taking the responsibility at all levels of management to secure the site and the need of a rapid, reliable diagnostic method for small nematode samples for use in the field. Australia is particularly concerned about the vulnerability of its 1million hectares of planted forests, 80% of which are Pinus species, to attack from incursions of one or more species of the insect vector. Monochamus alternatus incursions in wood pallets have been reported from Brisbane, Queensland. The climate of this part of Australia is such that the Pinus plantations are particularly vulnerable to the potential outcome of such incursions, and the state of Queensland is developing a risk management strategy and a proactive breeding programme in response to this putative threat. New Zealand has 1.6 million hectares of planted forests and 89% of the commercial forest is Pinus radiata. Although the climate where these forests are located tends to be somewhat cooler than that in Australia the potential for establishment and development of the disease in that country is believed to be high. The passage alone of 200,000 m³/year of wood packaging through New Zealand ports is itself sufficient to require response. The potential incursion of insect vectors of pinewood nematode through the port system is regarded as high and is monitored carefully. The enormous expansion of global trade and the continued use of unprocessed/inadequately-processed wood for packaging purposes is a challenge for all trading nations as such wood packaging material often harbours disease or pest species. The extent of this problem is readily illustrated by the expanding economies and exports of countries in south-east Asia. China. Japan and Korea have significant areas of forestland infested with B. xylophilus. These countries too are among the largest exporting countries of manufactured goods. Despite the attempts of authorities to ensure that only properly treated wood is used in the crating and packaging of goods B. xylophilus and/or its insect vector infested materials is being recorded at ports worldwide. This reminds us, therefore, of the ease with which this nematode pest can gain access to forest lands in new geographic locations through inappropriate use, treatment or monitoring of wood products. It especially highlights the necessity to find an alternative to using low-grade lumber for packaging purposes. Lest we should believe that all wood products are always carriers of B. xylophilus and its vectors, it should be remembered that international trade of all kinds has occurred for thousands of years and that lumber-born pests and diseases do not have worldwide distribution. Other physico-biological factors have a significant role in the occurrence, establishment and sustainability of a disease. The question is often raised as to why the whole of southern Europe doesn’t already have B. xylophilus and pine wilt disease. European countries have traded with countries that are infested with B. xylophilus for hundreds of years. Turkey is an example of a country that appears to be highly vulnerable to pine wilt disease due to its extensive forests in the warm, southern region where the vector, Monochamus galloprovincialis, occurs. However, there is no record of the presence of B. xylophilus occurring there despite the importation of substantial quantities of wood from several countries In many respects, Portugal illustrates both the challenge and the dilemma. In recent times B. xylophilus was discovered there in the warm coastal region. The research, administrative and quarantine authorities responded rapidly and B. xylophilus appears to have been confined to the region in which it was found. The rapid response would seem to have “saved the day” for Portugal. Nevertheless, it raises again the long-standing questions, how long had B. xylophilus been in Portugal before it was found? If Lisbon was the port of entry, which seems very likely, why had B. xylophilus not entered Lisbon many years earlier and established populations and the pine wilt disease? Will the infestation in Portugal be sustainable and will it spread or will it die out within a few years? We still do not have sufficient understanding of the biology of this pest to know the answers to these questions.

Matérias-primas da plataforma do Mondego para cerâmica

O presente trabalho divulga os resultados dos estudos levados a efeito nas matérias-primas argilosas que se integram tipologicamente na argila comum, ocorrentes na designada Plataforma do Mondego, Centro de Portugal, na região entre Miranda do Corvo, a SW, e Tábua, a NE. Para tal realizou-se a cartografia superficial dos sedimentos continentais do Cretácico e do Terciário, aí preservados, estabeleceram-se as colunas sedimentares, a nível regional e a nível local, nas áreas de maior potencial reconhecido e, caracterizaram-se as matérias-primas argilosas amostradas, em termos de composição, textura e aptidão cerâmica, objectivando a definição das zonas das jazidas com maior interesse industrial. A informação obtida e compilada, relativa ao caulino e ao feldspato é também apresentada, com vista a uma percepção da potencialidade destas matériasprimas cerâmicas ocorrentes na área. O estudo de caracterização dos materiais argilosos investigados teve como base 53 amostras obtidas em seis regiões da Plataforma do Mondego aqui definidas por motivo de organização do trabalho, segundo os critérios geográfico e geotectónico. As formações de Côja e de Campelo, do Terciário, constituem as unidades onde ocorrem litótipos produtivos, em termos de matéria-prima para a Cerâmica de Barro Vermelho ou Cerâmica de Construção. Relativamente às características texturais e composicionais, em síntese, apresentam-se os factos relevantes seguintes: A matéria-prima argilosa existente na área estudada materializa, granulometricamente, na maioria das amostras, silte, caindo os níveis amostrados com maior percentagem de argila, no domínio do silte argiloso. O défice em fracção argila implica limitações quanto à possibilidade de diversificação de produtos cerâmicos fabricados com estas matérias-primas tal-qual. Os diferentes métodos analíticos utilizados na caracterização mineralógica dos materiais amostrados confirmaram uma composição em termos dos minerais argilosos, consistindo de ilite/mica (em geral, o mais abundante), caulinite e esmectite, interestratificados e clorite. Os minerais não argilosos são quartzo (predominante), feldspato (sobretudo potássico) e hematite, com uma representação baixa. A mineralogia da fracção inferior a 2μm das amostras, não difere das amostras totais, salvo no teor mais elevado dos minerais argilosos e acentuada redução dos minerais não argilosos. Os resultados da análise química por fluorescência de raios X das amostras integrais correlacionam-se com as características mineralógicas observadas através das técnicas analíticas utilizadas. No respeitante às propriedades e comportamento cerâmico verifica-se: Os parâmetros relacionados com a plasticidade indicam que parte das pastas elaboradas com estes materiais argilosos têm uma trabalhabilidade aceitável, mas existem problemas de conformação e acentuada retracção num número significativo de amostras, devido à elevada plasticidade da maioria das amostras. A extrusão é satisfatória a óptima. A RMF e a retracção em seco assumem valores, respectivamente, moderados a baixos e moderados, embora seja necessário ter em conta o procedimento de extrusão dos provetes, sem dispositivo de vácuo. Todas as amostras foram sujeitas a cozedura a 900ºC, e um conjunto seleccionado foi cozido a 1000ºC e a 1100ºC. As fases mineralógicas ocorrentes após cozeduras a 900ºC e 1100ºC foram identificadas num conjunto de amostras, tendo-se evidenciado a coerência dessas fases, com a mineralogia das amostras em seco. Após cozedura a 900ºC, os valores de RMF das amostras satisfazem geralmente os valores mínimos, exigidos para o fabrico de tijolo, abobadilha e, com alguma frequência, de telha, como já se verificava com os valores daquela propriedade em seco. Os valores de retracção seco-cozido são em geral, modestos. A capacidade de absorção de água é maioritariamente elevada. A formação de vidro, sobretudo, condiciona o comportamento destas propriedades por cozedura dos provetes a 1000ºC e a 1100ºC. A coloração predominante em cru das matérias-primas argilosas amostradas é amarelo acastanhado a castanho avermelhado. Após cozedura a 900ºC, há um acentuado escurecimento e incremento no grau de vermelho. As cozeduras a 1000ºC e 1100ºC promovem escurecimento gradual, com ligeira influência na cor. O comportamento dos provetes após as cozeduras cerâmicas revelou-se homogéneo a cada uma das respectivas temperaturas, não se registando também defeitos significativos, nem eflorescências. A análise das amostras em termos composicionais e tecnológicos permitiu destacar as principais características e aspectos distintivos das matériasprimas, nas diferentes regiões definidas objectivando as diferentes potencialidades cerâmicas. Nesta abordagem comparativa foram consideradas só as amostras dos campos silte e silte arenoso, por serem aquelas com maior interesse para a Cerâmica de Construção. Nas colunas sedimentares das regiões de Tábua e Santa Quitéria constata-se a ocorrência de dois ritmos de sedimentação, que embora assumam características específicas em cada região, têm aspectos composicionais e tecnológicos em comum, traduzindo melhor aptidão cerâmica os ritmos inferiores. A conjugação da cartografia realizada com os estudos laboratoriais permite concluir que as regiões de Tábua e de Santa Quitéria serão as que têm maior potencial por explorar, em matéria-prima para Cerâmica de Construção, apesar da primeira já ser intensamente explorada. Na região de Tábua, as amostras têm como fases mineralógicas principais ilite e quartzo na mesma proporção média (35%) e caulinite (média=19%) que regista enriquecimento significativo na fracção argila (média=38%). As argilas desta região registam a cor em cru mais vermelha e pH mais ácido observados. O ritmo de sedimentação inferior, com esmectite e interestratificados e ligeiramente menos quartzoso, apresenta melhores propriedades cerâmicas. A composição mineralógica média das amostras da região de Santa Quitéria é próxima daquela da região de Tábua, mas menos caulinítica, em especial na sequência inferior, na qual o teor médio de caulinite na fracção argila (7%) é o mais baixo observado. Na região de Côja – Arganil, a actividade extractiva é significativa na bacia de Côja. Aqui, a exploração de novas áreas potenciais é condicionada pela cobertura conglomerática e por estruturas tectónicas e não tectónicas relacionadas com comportamento plástico. Na restante área desta região, os recursos argilosos são penalizados por material areno-conglomerático. As amostras desta região distinguem-se das restantes a nível textural pela maior fracção areia e mineralogicamente pela presença de clorite, teor reduzido de caulinite e elevado de feldspato. As potencialidades em barro vermelho na região de Sanguinheda não serão significativas, pois a Formação de Côja é predominantemente arcósica e a Formação de Campelo pouco espessa e conglomerática. As argilas com melhor aptidão cerâmica foram amostradas na região de Miranda do Corvo – Lousã. Na composição, estas amostras são as que contêm maior fracção de argila, maior teor de ilite e caulinite e menor de argilas expansivas. Registam os melhores valores nas características tecnológicas, nomeadamente a RMF e absorção de água. A consistência dos grupos amostrais e ritmos definidos em termos composicionais e tecnológicos é corroborada pelas técnicas de análise estatística multivariada aplicadas, que os identificam. As condições de amostragem na região de Tábua, permitiram a elaboração de uma coluna tipológica, na qual, a partir de uma caracterização expedita de amostras é possível identificar a sua afinidade com os ritmos argilosos definidos e, consequentemente, a sua situação na coluna sedimentar regional e aptidão cerâmica. A cartografia dos recursos argilosos potenciais, elaborada à escala 1:25.000, constitui um dos objectivos principais deste trabalho e nela constam unidades litológicas, nas quais são diferenciadas unidades argilosas tendo também em consideração a tipologia e guias mineralógicos resultantes da caracterização das amostras. As características composicionais destas unidades denotam diferente aptidão cerâmica e, portanto, permitem salientar as zonas com maior interesse económico.