Soil attributes and grain yield of upland rice as affected by cover crops.

The aim of this study was to determine the effect of pearl millet intercropped with other cover crops on mineral forms of N and urease activity in soil, nitrate reductase activity in the leaves of the follow-up rice crop, as well as the yield components of this rice crop. The experiment was performed in the year 2012/2013 at two locations of the Brazilian Cerrado.

Rice grain yield as affected by grain-producing cover crops in Cabo Delgado, Mozambique.

The aim of this study was to evaluate the production of biomass and grain cover crops, yield components, and grain yield of rice in Mozambique. The study was conducted in two sites located in the province of Cabo Delgado, in Mozambique.

Fertilizers with coated urea in upland rice production and nitrogen apparent recovery.

Urea is the most used N fertilizer for upland rice, however, a great percentage of N loss can occur with the use of this fertilizer. The use of products that provide reduction of N loss for urea fertilizers can contribute to increase N use efficiency. The objective of this study was to determine the effect of N rates applied in the form of coated urea in the content and accumulation of N in dry biomass, apparent recovery of nitrogen and grain yield of upland rice. The experimental design was a randomized complete blocks arranged in a 4 x 3 + 1 factorial scheme. The treatments consisted of four sources of N fertilizer [1. Common urea; 2. Polymer-coated urea for slow release of N (PCU); 3. urea with the urease inhibitor N-(n-Butyl) thiophosphoric triamide (NBPT); and 4. urea coated with copper sulfate and boric acid as urease inhibitors (UCCB)], with three fertilization rates (30, 60 and 90 kg ha-1 of N). In addition, we included a control treatment without N application. Coated urea did not provide increases in rice grain yield in relation to common urea. The increasing amount of N resulted in significant increases in rice grain yield (from 3217 to 5548 kg ha-1, 2010/11, and from 3392 to 4560 kg ha-1, 2011/12). The apparent nitrogen recovery rate decreased with the increase in N applied doses.

Selectivity of pesticides used in rice crop on Telenomus podisi and Trichogramma pretiosum¹.

2016

Rice development and water demand under drought stress imposed at distinct growth stages.

2016

The evolution and diversification of Dicers in plants

Most multicellular organisms regulate developmental transitions by microRNAs, which are generated by an enzyme, Dicer. Insects and fungi have two Dicer-like genes, and many animals have only one, yet the plant, Arabidopsis, has four. Examining the poplar and rice genomes revealed that they contain five and six Dicer-like genes, respectively. Analysis of these genes suggests that plants require a basic set of four Dicer types which were present before the divergence of mono- and dicotyledonous plants (∼200 million years ago), but after the divergence of plants from green algae. A fifth type of Dicer seems to have evolved in monocots. © 2006 Federation of European Biochemical Societies.

Nitrogen dynamics and nitrogen use efficiency of spring cereals under Finnish growing conditions

Nitrogen (N) is one of the main inputs in cereal cultivation and as more than half of the arable land in Finland is used for cereal production, N has contributed substantially to agricultural pollution through fertilizer leaching and runoff. Based on this global phenomenon, the European Community has launched several directives to reduce agricultural emissions to the environment. Trough such measures, and by using economic incentives, it is expected that northern European agricultural practices will, in the future, include reduced N fertilizer application rates. Reduced use of N fertilizer is likely to decrease both production costs and pollution, but could also result in reduced yields and quality if crops experience temporary N deficiency. Therefore, more efficient N use in cereal production, to minimize pollution risks and maximize farmer income, represents a current challenge for agronomic research in the northern growing areas. The main objective of this study was to determine the differences in nitrogen use efficiency (NUE) among spring cereals grown in Finland. Additional aims were to characterize the multiple roles of NUE by analysing the extent of variation in NUE and its component traits among different cultivars, and to understand how other physiological traits, especially radiation use efficiency (RUE) and light interception, affect and interact with the main components of NUE and contribute to differences among cultivars. This study included cultivars of barley (Hordeum vulgare L.), oat (Avena sativa L.) and wheat (Triticum aestivum L.). Field experiments were conducted between 2001 and 2004 at Jokioinen, in Finland. To determine differences in NUE among cultivars and gauge the achievements of plant breeding in NUE, 17-18 cultivars of each of the three cereal species released between 1909 and 2002 were studied. Responses to nitrogen of landraces, old cultivars and modern cultivars of each cereal species were evaluated under two N regimes (0 and 90 kg N ha-1). Results of the study revealed that modern wheat, oat and barley cultivars had similar NUE values under Finnish growing conditions and only results from a wider range of cultivars indicated that wheat cultivars could have lower NUE than the other species. There was a clear relationship between nitrogen uptake efficiency (UPE) and NUE in all species whereas nitrogen utilization efficiency (UTE) had a strong positive relationship with NUE only for oat. UTE was clearly lower in wheat than in other species. Other traits related to N translocation indicated that wheat also had a lower harvest index, nitrogen harvest index and nitrogen remobilisation efficiency and therefore its N translocation efficiency was confirmed to be very low. On the basis of these results there appears to be potential and also a need for improvement in NUE. These results may help understand the underlying physiological differences in NUE and could help to identify alternative production options, such as the different roles that species can play in crop rotations designed to meet the demands of modern agricultural practices.

Genetic Diversity and Adaptation of Date Palm (Phoenix dactylifera L.)

Acquiring sufficient information on the genetic variation, genetic differentiation, and the ecological and genetic relationships among individuals and populations are essential for establishing guidelines on conservation and utilization of the genetic resources of a species, and more particularly when biotic and abiotic stresses are considered. The aim of this study was to assess the extent and pattern of genetic variation in date palm (Phoenix dacttylifera L) cultivars; the genetic diversity and structure in its populations occurring over geographical ranges; the variation in economically and botanically important traits of it and the variation in its drought adaptive traits, in conservation and utilization context. In this study, the genetic diversity and relationships among selected cultivars from Sudan and Morocco were assessed using microsatellite markers. Microsatellite markers were also used to investigate the genetic diversity within and among populations collected from different geographic locations in Sudan. In a separate investigation, fruits of cultivars selected from Sudan, involved morphological and chemical characterization, and morphological and DNA polymorphism of the mother trees were also investigated. Morphological and photosynthetic adjustments to water stress were studied in the five most important date palm cultivars in Sudan, namely, Gondaila, Barakawi, Bitamoda, Khateeb and Laggai; and the mechanism enhancing photosynthetic gas exchange in date palm under water stress was also investigated. Results showed a significant (p < 0.001, t-test) differentiation between Sudan and Morocco groups of cultivars. However, the major feature of all tested cultivars was the complete lack of clustering and the absence of cultivars representing specific clones. The results indicated high genetic as well as compositional and morphological diversity among cultivars; while, compositional and morphological traits were found to be characteristic features that strongly differentiate cultivars as well as phenotypes. High genetic diversity was observed also in different populations. Slight but significant (p < 0.01, AMOVA) divergence was observed for soft and dry types; however, the genetic divergence among populations was relatively weak. The results showed a complex genetic relationships between some of the tested populations especially when isolation by distance was considered. The results of the study also revealed that date palm cultivars and phenotypes possess specific direct or interaction effects due to water availability on a range of morphological and physiological traits. Soft and dry phenotypes responded differently to different levels of water stress, while the dry phenotype was more sensitive and conservative. The results indicated that date palm has high fixation capacity to photosynthetic CO2 supply with interaction effect to water availability, which can be considered as advantageous when coping with stresses that may arise with climate change. In conclusion, although a large amount of diversity exists among date palm germplasm, the findings in this study show that the role of biological nature of the tree, isolation by distance and environmental effects on structuring date palm genome was highly influenced by human impacts. Identity of date palm cultivars as developed and manipulated by date palm growers, in the absence of scientific breeding programmes, may continue to mainly depend on tree morphology and fruit characters. The pattern of genetic differentiation may cover specific morphological and physiological traits that contribute to adaptive mechanisms in each phenotype. These traits can be considered for further studies related to drought adaptation in date palm.

中国普通野生稻（Oryza rufipogon Griff.）群体遗传学及保护策略的研究

普通野生稻的基因资源对水稻的育种已经起过并将继续起至关重要的作用。所以，研究和保存其遗传多样性具有重要的意义。首先对普通野生稻在我国的分布现状作了较为全面的野外调查。采集了69个群体，近2000个个体的硅胶干燥叶片。研究了从硅胶干燥的小量叶片中高效率、高质量制备DNA的方法。并用此方法制备了44个代表群体，1168个个体的总DNA，建立了中国普通野生稻的总DNA库。随机选取19个引物对29个群体、651个个体的总DNA进行了RAPD扩增。统计出群体和地区内的多态性片段百分比（PPB），RAPDistance和WINAMOVA程序联用分析遗传变异在地区间、地区内群体间和群体内的组成。广西濠江流域5个野生群体的分析结果表明了中下游群体的PPB值显著高于中上游群体。从而从分子水平上证实了水流对无性繁殖体的传播影响了沿江分布群体的遗传多样性和遗传结构。6个现有原位保护群体的分析结果说明了5个群体值得进一步原位保护，而另一个群体适合异位保护。中国境内29个群体的统计分析揭示出群体间的遗传多样性差异很大（PPB值从23.29%到46.18%）。广东具有的PPB值最高（79.12%），其次是海南（77.11%）和广西（68.67%）。因而，华南是我国普通野生稻的遗传多样性中心。18个群体AMOVA分析结果均表明了遗传变异主要存在于群体内，但群体间业已有较大的遗传分化。从175个随机引物中筛选出9个引物，成功地鉴定出5个群体的克隆多样性和克隆结构。这二者与群体的生态环境，特别是水分状况密切相关。也同时受人类干扰强度的影响。而与群体所处的纬度没有明显的相关性。 根据以上结果，普通野生稻原位保护的策略是选取分布在不同地理区域、遗传多样性水平高的群体。分布在广东、海南和广西的6个群体，具有很高的遗传多样性，建议加以原位保护。此外，孤岛状隔离在我国普通野生稻分布区边缘的3个小群体也应立即进行原位保护。此外，原位保护的群体应给予适度的干扰以维系较高的克隆多样性和遗传多样性。在进行遗传多样性研究和异位保护时，每群体的取样个体数应不少于25株，相邻取样个体间的距离应大于12米。

稻属C染色体组物种的群体遗传学和物种形成研究

植物近缘物种系统发育和物种形成过程一直以来都是植物进化生物学研究中最基本的问题之一，是人们理解自然界物种多样性产生和变化的前提。近缘物种间通常形态相似，遗传和分子水平的分化很小且常受诸如渐渗杂交、谱系分选、种内重组等微观进化事件的影响，导致植物近缘物种间系统发育和物种形成过程研究极为困难。在过去十多年中，生物技术的革新和理论方法的发展极大地推动了进化生物学研究，促进了人们对一些重要模式生物与其近缘种间的系统发育关系和物种分化过程的认识，如人、果蝇、线虫、拟南芥和玉米等。然而，迄今在植物中，许多重要类群及其近缘种的系统发育和物种形成过程研究仍不多见，包括在具有特殊重要性的栽培作物中，如稻属（Oryza L.）。由于属内包含有重要粮食作物水稻，稻属向来都是禾本科内备受关注的一个类群。本研究中，我们通过多基因序列的方法，探讨了稻属C染色体组三个近缘二倍体物种的系统发育和物种形成过程，主要研究结果如下。 为选择适宜的实验策略和保证序列数据的真实性，我们利用不同聚合酶扩增自交的栽培稻Oryza sativa ssp. japonica和异交的O. longistaminata不同类型的基因片段，采用克隆测序的方法，评估聚合酶链式扩增反应（PCR）中产生的非真实变异的状况。我们使用exTaq、exTaq和Pfu混和酶和PfuUltraTM酶三种不同聚合酶扩增了Adh1、GPA1和Waxy三个基因片段。在检测到的非真实变异中，PCR 错误的类型主要为单碱基变异和不同等位基因间重组，其中以单碱基变异为主，且突变类型以转换占绝大多数。比较不同酶扩增错误的结果表明，高保真PfuUltraTM酶对PCR反应错误有显著的改善，在扩增产物的单克隆中几乎检测不到PCR噪音，错误率仅为0.0001%，而exTaq和混和酶的错误率分别为0.096%和0.073%。从不同物种比较结果来看，exTaq酶和Pfu酶混用时在自交的O. sativa ssp. japonica内对PCR错误也表现明显的改善，但在异交的O. longistaminata中改善效应不太明显。在三个不同基因位点上，PCR扩增错误出现频率随扩增区域增长而变大。在PfuUltraTM酶的扩增产物中发现重组最少，exTaq和混和酶重组较多，且混和酶对重组改善效果不明显。基于不同聚合酶扩增错误对比研究结果，我们认为，由于能保证序列变异的真实性且不遗漏等位基因，核基因的克隆测序较宜于分离杂合个体中不同的等位基因。 基于随机挑取4个叶绿体和10个核基因位点，利用12份Oryza officinalis、8份O. eichingeri和4份O. rhizomatis材料，对稻属C染色体组三个近缘二倍体物种的系统发育关系作了深入分析。利用不同的系统发育分析方法对单基因位点序列和合并序列数据作了分析，结果表明，稻属C染色体组三个近缘种间呈多歧分支。因此，三个二倍体C染色体组物种可能经快速辐射分化形成。在不同核基因和叶绿体基因的系统发育树中各分支枝长均很短，也表明C染色体组的三个物种可能在较短时期内分化出。不同基因间拓扑结构不一致主要受谱系随机分选的影响。此外，C染色体组不同物种间的种间渐渗和不同等位基因重组对系统发育树的冲突也有影响。值得注意的是，C染色体组三个物种的辐射分化不排除由于相邻两次物种形成事件间隔时间太近、目前数据量不够而无法分辨的可能。在本研究中，我们发现，对于系统发育重建困难的类群，利用等位基因构建物种谱系树有助于挖掘不同基因间结果不一致的因素。 基于10个随机选取的核基因序列数据，利用物种水平的取样方式和群体遗传学分析方法，我们研究了稻属C染色体组三个近缘物种O. officinalis、O. eichingeri和O. rhizomatis的核苷酸多态性，并根据多态性水平和式样，推测了三个近缘种分化的历史。结果表明，在C染色体组的三个近缘种中，仅分布于斯里兰卡的O. rhizomatis的核苷酸多态性水平相对最低（θsil = 0.0038），而间断分布于非洲和斯里兰卡的O. eichingeri最高（θsil = 0.0057）。与被子植物其他类群相比，稻属C染色体组三个物种的核苷酸多态性水平显得较低，O. eichingeri的核苷酸多态性仅约为玉米及其近缘野生种的23-46%和拟南芥的35%。C染色体组内三个野生种相对较低的核苷酸多态性水平可能起因于其较小的祖先有效群体。物种形成模型分析表明，O. officinalis和其近缘种从最近共同祖先分化开后可能经历了居群缩减的历史，且自最近共同祖先分开后，三个物种彼此间并无显著的基因交流。基于分子钟粗略估算了C染色体三个物种分化时间，结果表明，三个物种彼此在很短的时期内分开，约0.63-0.68 Myr。同时，O. eichingeri在非洲和斯里兰卡两个地理宗的分异时间约为0.37 Myr，且推测斯里兰卡的O. eichingeri主要由西非经长距离扩散传播到斯里兰卡。

联合固氮菌Klebsiella oxytoca SA2和水稻幼苗的相互作用

从内蒙流沙地先锋植物沙竹（Psammochloa mongokca）内分离到一株内生细菌，经鉴定定名为Klebsiella oxytoca SA-2 K.oxytoca SA-2兼性厌氧固氮，NH4+抑制其固氮酶合成。部分抑制固氮酶活性;N03 -抑制其固氮酶的合成和活性。 60℃灭活K.oxytoca SA-2整体菌免疫兔子得到抗血清。免疫印迹表明此抗血清具K.oxytoca SA-2种特异性。石蜡切片免疫金银染色结合显微观察发现K.oxytoca SA-2定殖于沙竹叶鞘薄壁细胞和叶片的薄壁细胞内。 K.oxytoca SA-2在半固体培养基中接种水稻幼苗，限菌培养21天，根内重新分离的数量达l06 cfu/g．FWroot，但K.oxytoca SA-2在富养的土壤中生长良好，表现为兼性内生菌。 限菌培养水稻（Oryza sativa）幼苗，石蜡切片免疫金银染色结合显微观察研究了的K.oxytoca SA-2的侵染特性．K.oxytoca SA-2可以通过侧根发生处和表皮细胞胞间层进入根内，在皮层薄壁细胞间隙大量定殖，在解体和看似完整的薄壁细胞内也有定殖，在根和茎中柱内K.oxytoca SA-2进入了木质部导管。在根基，K.oxytoca SA-2大量侵入了已解体的内皮层和中柱鞘细胞，植物细胞在K.oxytoca SA-2侵入后解体，可能表现为严格的局部超敏反应。 接种K.oxytoca SA-2 21天，水稻地上苗部分没有发现肉眼和显微可见的病症。与对照相比，接种K.oxytoca SA-2显著促进限氮培养水稻幼苗的生长。由于K.oxytoca SA-2在限碳限氮培养基和水稻幼苗共培养时能分泌NH4+和植物激素，它可能通过向水稻幼苗提供氮素和分泌植物激素促进植物生长。而且用固氮酶铁蛋白抗血清进行免疫金银染色发现定殖在根基皮层薄壁细胞胞间层和细胞间隙，木质部导管和茎基木质部导管的K.oxytoca SA-2可以表达固氮酶，固氮参与了K.oxytoca SA-2在水稻幼苗中的内生。 培养基内碳源（苹果酸）和培养温度对K.oxytoca SA-2和水稻幼苗相互作用的影响也进行了研究。 研究表明，K.oxytoca SA-2作为兼性内生固氮菌，能够和植物紧密联合，并在植物体内开拓一个有利的生态位固氮，而且K.oxytoca SA-2可以分泌NH4+和植物激素，在和植物相互作用中使植物受益。

由农杆菌介导将葡萄糖氧化酶基因转入水稻

过氧化氢（Hydrogen peroxide,H2O2）是植物和病原微生物互作中快速合成的一种早期活性氧类（reactive oxygen species, ROS ），它在植物受到病原微生物侵染后引发的一系列防御反应中起着非常重要的作用，因此通过外源基因导入提高植物体内过氧化氢的含量，可以增强植物的广谱抗病性。葡萄糖氧化酶（glucose oxidase, GO）可以催化β-D-葡萄糖氧化生成过氧化氢和葡萄糖酸，此酶已在数种细菌和真菌中检测到，但在植物和动物中仍未发现。为了尝试将此酶应用于水稻广谱抗病基因工程，本研究将葡萄糖氧化酶基因插入具有潮霉素抗性选择标记的双元载体pCAMBIA1301，新构建为水稻高效表达载体pCAG1301。将此质粒导入根癌农杆菌（Agrobacterium tumefaciens ）菌株LBA4404后,转化粳稻(Oryza sativa )品种日本晴(Nipponbare)成熟胚来源的愈伤组织和幼胚，并由筛选出的潮霉素抗性愈伤组织分化再生植株。对所得到的潮霉素抗性植株的Southern杂交分析表明GO基因已整合到受体基因组,为单拷贝或双拷贝插入。利用过氧化氢与淀粉-碘化钾反应显蓝色的特性检测到了转基因植株产生的过氧化氢，证实GO基因表达产生的葡萄糖氧化酶已经在水稻中发挥功能，这是将GO基因转入单子叶植物的首例报道。 基于过氧化氢诱导的植物防御反应没有种属专一性的优点，可以预期所得转基因水稻植株很可能对水稻的多种病原菌具有良好的抗性。已完成的抗病性鉴定表明，所得转基因水稻植株对稻瘟病具有良好的抗性。

水稻OsRAA1基因的克隆与功能分析

FPF1（flowering promoting factor1）蛋白最早在白芥中研究发现是开花促进因子, 可能参与了赤霉素的信号传导途径。它可以和AP1和LFY蛋白协同作用，促进茎顶端分生组织向花分生组织转化。本论文将AtFPF1基因转化水稻，转基因水稻抽穗时间只有微弱的提前。然而异源表达AtFPF1却抑制了转基因水稻根的生长，促进了成苗根系的发达。这些表型类似于我们克隆的水稻OsRAA1 （Oryza sativa Root Architecture Associated 1）的功能。这是首次报道AtFPF1/OsRAA1在水稻中具有控制根系发育的功能 生物信息学分析表明水稻OsRAA1基因定位于水稻1号染色体，它编码的蛋白推测分子量为12kD和AtFPF1有58%的同源。通过RNA原位杂交和OsRAA1基因启动子调控GUS基因表达的模式，证实OsRAA1基因主要在根尖的顶端分生区和伸长区，根尖分支区和幼侧根的中柱，侧根的原基表达。同时在幼穗分支顶端，根茎结合区的边周维管束，稃片，花药与花丝的结合区也有表达。OsRAA1在玉米泛素启动子驱动下组成型表达，可以抑制水稻初生根的生长，促进不定根的形成，部分植物形成不同程度螺旋状的初生根。这些表型和野生型水稻用生长素处理的表型类似。OsRAA1组成型表达，在成苗阶段，特别是孕穗前，大大促进叶片伸长，并导致部分小花败育。光学镜检表明OsRAA1组成型表达的水稻的花丝伸长过快，部分小花花药萎缩败育。剑叶表面细胞电镜扫描表明，OsRAA1组成型表达的水稻剑叶的硅化细胞比对照植株要长。野生型水稻根系生长素处理的Northern杂交和OsRAA1基因启动子调控GUS基因表达的水稻生长素处理后GUS活性染色表明，OsRAA1基因的转录受生长素诱导。而且OsRAA1组成型表达的水稻根的向地性反应减缓。这些结果表明，OsRAA1可能参与了生长素的信号转导途径。 与此同时，从基因序列数据库中，在很多植物中寻找到很多表达片段和FPF1/OsRAA1基因同源。从已有报道和我们的结果表明，在植物中可能普遍存在一个受赤霉素和生长素调控FPF1/OsRAA1基因家族，调控着植物各个器官的发育。

植物络合素合酶基因的功能分析及其应用

植物络合素（phytochelatins，PCs）是含有γ-Glu-Cys重复结构的小分子多肽，其结构通式为：（γ-Glu-Cys）n-Gly（n=2-11）。植物络合素（PCs）由植物络合素合酶（PCS）催化谷胱甘肽（GSH）聚合而成，能够络合重金属离子而具有解毒功能，这是植物解毒重金属胁迫的重要机制之一。本文克隆了来源于重金属抗性植物绊根草（Cynodon dactylon cv Goldensun）的植物络合素合酶基因，通过基因工程手段使其在烟草中过量表达，得到了一些有望用于植物修复（phytoremediation）的工程植株。同时，在水稻（Oryza sativa）种子中利用RNAi技术抑制植物络合素合酶基因的表达，以降低重金属离子在人类最重要的粮食作物水稻的籽粒中的积累。 1. 通过RACE（Rapid Amplification of cDNA Ends）方法从抗性植物绊根草中克隆了植物络合素合酶基因CdPCS1，其1515 bp的读码框编码一个含505个氨基酸的蛋白质，蛋白质序列分析表明它具有植物络合素合酶的结构特征，同时还具有磷酸化位点和亮氨酸拉链结构。 2. CdPCS1基因可以互补对铜和镉离子敏感的酵母突变株ABDE-1（cup1Δ）中缺失的金属硫蛋白基因CUP1的功能，也可以互补对砷离子敏感的酵母突变体FD236-6A（acr-3Δ）中的离子外排载体基因ARC3的缺失。 3. 将CdPCS1转入烟草，共获得过表达CdPCS1的烟草44个株系，其中融合GFP的株系16个。对T0代的转基因植株的PCs含量以及重金属抗性和吸收能力进行了分析，其中抗性实验表明，在300μmol/L 的Cd2+离子胁迫11天之后，野生型植株的叶片出现斑点状坏死，而两个转基因烟草株系S6和K49的植株没有出现受伤害症状。在100μmol/L���CdSO4处理一周后，转基因植株中的PCs含量比对照有不同程度的提高，最多提高了2.88倍。当用300μmol/L Cd2+处理9天再用600μmol/L Cd2+处理2天后，Cd的积累量比野生型植株增加了2倍多;用50μmol/L As3+处理7天再用100μmol/L As3+处理2天后，转基因植株对As的积累量最多增加了3倍多。说明转入绊根草PC合酶基因的烟草增加了植物络合素的合成，并由此增加了对镉离子的抗性以及对镉离子和砷离子的积累。 4. 对转基因烟草中的CdPCS1进行了亚细胞定位研究。在激光共聚焦显微镜和荧光显微镜下分别用转基因烟草叶片组织和叶肉细胞原生质体观察融合GFP的CdPCS1，结果表明融合蛋白定位于细胞核中。 5. .利用RNAi技术抑制水稻种子中植物络合素合酶基因的表达，共获得39个转基因株系。其中35个株系为种子特异性ZMM1启动子驱动OsPCS1基因的RNAi，其余4个株系由组成型的Ubiquitin启动子驱动。RT-PCR的分析结果表明：一个由ZMM1启动子驱动的RNAi转基因水稻株系的种子中，OsPCS1的mRNA水平比对照中的下降了一半。

OsRMC基因调控水稻根生长发育的机理研究

实验室前期工作证明OsRAA1在玉米泛素启动子驱动下组成型表达，可以抑制水稻初生根的生长，促进不定根的形成，形成不同程度螺旋状的初生根，根的向地性反应减缓，这些表型和野生型水稻用生长素处理的表型类似，而且OsRAA1基因的转录受生长素诱导，这些结果表明OsRAA1可能参与了生长素的信号转导途径。但这些表型产生的机理还不是很清楚。在水稻中，茉莉酸在根发育过程中的作用多为生理实验的报道;拟南芥中的研究表明生长素信号转导和茉莉酸信号转导可能都受26S蛋白酶体的调控。由此我们推测茉莉酸在根的发育过程中可能也起着同样的促进作用。本论文在超表达OsRAA1水稻基础上旨在克隆新基因，并对新基因功能进行研究，以探讨茉莉酸在水稻根发育过程中的分子机理，并对生长素和茉莉酸信号转导的关系进行探讨。 　　首先运用双向电泳技术结合质谱分析技术，在超表达OsRAA1水稻背景下发现了受体激酶家族DUF26的一个成员明显下调，我们命名为OsRMC（Oryza sativa Root Meander and Curling，AAL87185），Western杂交进一步证明了这个结果。 　　OsRMC位于4号染色体，信息学分析表明只有一个拷贝，没有内含子，ORF阅读框为777bp，编码的蛋白分子量为27.9 kDa，等电点（pI）为5.01。对该蛋白进行同源性比较发现，其含有2个C-X8-C-X2-C基序（Cys-rich repeat, CRR）即半胱氨酸富集区，其中第四个半胱氨酸残基不保守，该基序会形成二硫键，编码两个未知功能的DUF26（Domain Unknown Function 26）结构域。OsRMC由一个信号肽和两个CRR区组成，但没有跨膜区和激酶区。RT-PCR显示OsRMC可能是组成型表达的基因;亚细胞实验表明OsRMC是膜定位的蛋白。Western blot显示OsRMC受茉莉酸诱导表达，受生长素的抑制。 　　RNAiOsRMC转基因水稻在暗处培养时，抑制了初生根的生长，使侧根数目减少，但促进了不定根的生长和数目的增加;第二叶鞘变短，这些表型和前人报道的外源茉莉酸处理野生型的表型一致。转基因对生长素信号转导和合成没有影响，但初生根和第二叶鞘对外源茉莉酸更加敏感，说明RNAiOsRMC转基因水稻可能增强了茉莉酸信号转导途径。分析转基因水稻的茉莉酸信号转导途径部分相关基因的表达变化，根中受茉莉酸信号转导特异诱导的病原相关基因RSOsPR10的表达明显增多，而JAmyb和OsNDPK1的表达没有变化，证实转基因增强了茉莉酸信号转导其中的一个路径;进一步分析茉莉酸合成途径12-OXO-PDA（12-氧代-顺，顺-10，15-植物二烯酸）还原酶基因OsOPR的表达发现与野生型没有明显差别，说明转基因可能没有影响体内的茉莉酸合成途径。RNAiOsRMC转基因水稻的初生根比野生型的更容易发生弯曲，实验表明培养过程中茉莉酸和背触反应（negative thigmotropism）共同作用使转基因的初生根更容易发生卷曲，而光信号会增强卷曲程度。但RNAiOsRMC转基因水稻并没有影响根的向地性，暗示RNAiOsRMC转基因可能增强了根的回旋运动或（和）背触反应，从而促进了根的弯曲和卷曲。这些结果证明OsRMC参与的茉莉酸信号转导过程在水稻根的发育、弯曲和卷曲过程中起着重要的促进作用。通过对超表达OsRAA1和RNAiOsRMC转基因水稻的分析，说明水稻中存在着生长素信号转导促进茉莉酸信号转导的途径。 　　综合以上实验结果认为，OsRAA1调控了受体激酶家族DUF26的一个成员OsRMC，使其表达量降低，该过程增强了茉莉酸信号转导途径;确认了受体激酶家族DUF26的基因具有重要的生物学功能，证实了OsRMC调控的茉莉酸信号转导在水稻根系发育、根弯曲和卷曲过程中具有重要的促进作用;证明水稻中存在着生长素信号转导促进茉莉酸信号转导的途径，为完善各种植物激素调控水稻根系发育的网络提供了新的实验证据。