Occurrence of fungi in water used at a haemodialysis centre

Aims: The aim of this study was to identify and determine the diversity, occurrence and distribution of fungi in water used at a haemodialysis centre.Methods and Results: Samples in the hydraulic circuit for the distribution of the water, dialysate samples and samples of sterilization solution from dialysers were collected over a 3-month period, and 500 ml of each sample was filtered through membranes. All together 116 isolates of fungi were recovered from 89% of all water samples collected inside the haemodialysis unit, with prevalence of moulds in tap water samples and of yeasts in dialysate samples. Fusarium spp. was the most abundant genus found, whereas Candida parapsilosis was the predominant yeast species.Conclusions: This study demonstrated that various fungi were present in the water system. These data suggest the inclusion of the detection and quantification of fungi in the water of haemodialysis.Significance and Impact of the Study: The recovery of fungi from aqueous haemodialysis environments implies a potential risk for haemodialysis patients and indicates the need for continuous maintenance and monitoring. Further studies on fungi in haemodialysis water systems are required to investigate the organism ability to persist, their role in biofilm formation and their clinical significance.

Efeito da colhedora, velocidade e ponto de coleta na contaminação de sementes de soja por fungos

A pesquisa foi realizada com o objetivo de avaliar a qualidade sanitária de sementes de soja cv. Coodetec 217, colhidas por duas colhedoras operando em velocidades e pontos de coleta distintos. O delineamento foi inteiramente casualizado, no esquema fatorial 2x2x2. Os tratamentos foram constituídos por duas máquinas Massey Ferguson (MF 2003 e MF 2004), duas velocidades (4 e 7 Km.h¹) e dois pontos de coleta (tanque graneleiro e saída do tubo de descarga). A sanidade foi avaliada pelo método do papel de filtro, com quatro repetições de 50 sementes. Houve interação significativa para os fatores colhedora e ponto de coleta para a incidência de Penicillium sp. e Fusarium sp., entre colhedora e velocidade para Aspergillus spp., e, entre velocidade e ponto de coleta para Penicillium sp.. A presença de fungos associados às sementes, principalmente, Cladosporium sp. e Fusarium sp., independe do tipo de colhedora. Uma menor contaminação fúngica é observada nas sementes coletadas na saída do tubo de descarga à 4 Km.h-1. Para Fusarium sp., Aspergillus spp., e Penicillium sp. existe uma dependência dos fatores sobre suas incidências nas sementes da cultivar analisada, sob as condições estudadas.

O papel de Rhizoctonia spp. binucleadas na indução de resistência a mela da soja

The role of non-pathogenic binucleate Rhizoctonia spp. (BNR) on the biocontrol of diseases caused by R. solani on many crops has been reported in the literature. However, in Brazil, there is no information about the potential of BNR as biocontrol agents against Rhizoctonia diseases on soybean. on this research we tested the hypothesis that BNR can induce resistance on soybean against the foliar blight caused by R. solani anastomosis group (AG) 1 IA. Thus, the objective of this research was to evaluate BNR isolates isolated from peanuts, snapbeans and soybean according to their ability for inducing resistance on soybean against the foliar blight disease, under greenhouse conditions. This research evidenced the role of BNR inducing resistance on soybeans against the foliar blight. However, both the occurrence and effectiveness of the phenomenon of induced resistance are dependent on the soybean cultivation season.

Choosing between Cox proportional hazards and logistic models for interval-censored data via bootstrap

This work develops a new methodology in order to discriminate models for interval-censored data based on bootstrap residual simulation by observing the deviance difference from one model in relation to another, according to Hinde (1992). Generally, this sort of data can generate a large number of tied observations and, in this case, survival time can be regarded as discrete. Therefore, the Cox proportional hazards model for grouped data (Prentice & Gloeckler, 1978) and the logistic model (Lawless, 1982) can befitted by means of generalized linear models. Whitehead (1989) considered censoring to be an indicative variable with a binomial distribution and fitted the Cox proportional hazards model using complementary log-log as a link function. In addition, a logistic model can be fitted using logit as a link function. The proposed methodology arises as an alternative to the score tests developed by Colosimo et al. (2000), where such models can be obtained for discrete binary data as particular cases from the Aranda-Ordaz distribution asymmetric family. These tests are thus developed with a basis on link functions to generate such a fit. The example that motivates this study was the dataset from an experiment carried out on a flax cultivar planted on four substrata susceptible to the pathogen Fusarium oxysoprum. The response variable, which is the time until blighting, was observed in intervals during 52 days. The results were compared with the model fit and the AIC values.

Microfungal 'Weeds' in the Leafcutter Ant Symbiosis

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Relação entre características morfológicas da cariopse e fusariose em milho

Fusarium moniliforme causa sérios prejuízos no rendimento do milho. Suspeita-se que a entrada do fungo na cariopse ocorra pela cicatriz do estilete, e que este fato e o nível de infestação por F. moniliforme estejam relacionados com características morfológicas da cariopse. O objetivo deste trabalho foi identificar características morfológicas que conferem resistência a F. moniliforme em cariopses de milho. Cariopses de seis linhagens de milho, com e sem inoculação do patógeno, foram avaliadas utilizando-se de estereomicroscópio e o microscópio eletrônico de varredura. Características morfológicas da cariopse, tais como: tegumento com saliências e reentrâncias acentuadas, pericarpo pouco espesso, amido menos compacto e presença do canal estilar favorecem a penetração de F. moniliforme.

Distribuição da biomassa e minerais em família de bananeira 'prata-anã' adubada com zinco via broto desbastado

O Norte de Minas Gerais cultiva basicamente bananeira 'Prata-Anã', cultivar especialmente exigente em zinco. A possibilidade de fornecimento de Zn, sem que esse entre em contato com o solo, é importante para a região, uma vez que vários fatores levam à baixa disponibilidade do elemento fornecido via solo, como: elevado teor de matéria orgânica na camada superficial (resultante de resíduos culturais); manutenção de elevado pH do solo - acima de 6,00 - como estratégia contrária à proliferação do agente causal do mal- do-panamá; adubações frequentes com potássio e magnésio, que além de basificar o meio, diminuem a participação do Zn no equilíbrio cátion-ânion do solo, dificultando a absorção deste micronutriente pela planta. Para determinar a distribuição de biomassa e minerais na bananeira Prata-Anã, cultivada sob irrigação no norte de Minas Gerais, quando o zinco é fornecido via broto desbastado, foi conduzido um experimento no Perímetro Irrigado de Jaíba. As plantas foram adubadas com 0,00; 1,66 e 3,33 g.família-1 de Zn (0; 25 e 50 g.família-1.ano-1 de sulfato de Zn), via muda desbastada. Um mês após as adubações de outubro de 2007 e junho de 2008, avaliaram-se a produção de massa fresca (MF) e massa seca (MS), os teores e conteúdos de minerais em todos os órgãos de uma ''família'' de bananeira composta por planta-mãe com cacho + planta-filha alta + planta-neta. As doses de Zn não influíram na produção de MF e MS das plantas na primeira avaliação, enquanto na segunda avaliação observou-se efeito positivo do tratamento apenas para MF acumulada nas folhas inferiores, nas porções do terço médio e inferior do pseudocaule, e no rizoma da planta-mãe. Tanto o teor quanto o acúmulo de nutrientes nas plantas-mãe apresentaram a seguinte ordem decrescente: K > N > Ca > Mg > P > S > Fe > Zn > B > Cu. Os teores de Zn foram afetados pela dose desse micronutriente na maioria das situações estudadas. O Zn fornecido via broto desbastado ascendeu na planta-mãe, e daí se redistribuiu na ''família'' da bananeira.

Germinação, qualidade sanitária e armazenamento de sementes de canafístula (Peltophorum dubium)

Neste trabalho, objetivou-se avaliar o efeito de métodos de superação de dormência e do ambiente de armazenamento sobre a qualidade fisiológica e fitopatológica das sementes de canafístula (Peltophorum dubium). As sementes foram submetidas aos seguintes tratamentos de superação de dormência: escarificação com lixa (200); imersão em água na temperatura ambiente, durante 24 e 72 h; imersão em ácido sulfúrico por 2, 6, 10, 15, 20 e 30 min; imersão em água quente (70, 80 e 90 C); e umedecimento do substrato com solução de KNO3 (0,2%). As sementes foram armazenadas na temperatura ambiente e a 10 C por 210 dias. Os efeitos dos tratamentos e do armazenamento foram avaliados por meio do teor de água, teste de germinação (cinco repetições de 30 sementes), de comprimento de plântulas e sanidade (400 sementes), com incubação por oito dias (22-25 C). Na análise estatística dos dados, utilizou-se o delineamento experimental inteiramente casualizado em esquema fatorial 2 x 14 (condições de armazenamento x tratamentos para a superação da dormência). As médias foram comparadas pelo teste de Tukey (P>0,5). Com relação às sementes não armazenadas, os melhores tratamentos para superar a dormência e promover a germinação foram escarificação com lixa ou ácido sulfúrico por 15 a 30 min; quanto às sementes armazenadas, houve a imersão em água quente (70 a 80 ºC). Os fungos detectados nas sementes foram Pestalotia sp., Alternaria sp., Rhizopus sp., Nigrospora sp., Curvularia sp., Fusarium sp., Rhizoctonia sp., Aspergillus sp., Cladosporium sp. e Fusarium semitectum.

Qualidade sanitária e germinação de sementes de pinhão-manso

O pinhão-manso é uma espécie arbustiva que está se destacando pelo interesse para produção de biocombustível, porém, os estudos sobre controle de qualidade das sementes estão se iniciando. Neste trabalho objetivou-se estudar o efeito da temperatura e do tempo de contagem na germinação de sementes de pinhão-manso, conduzido em papel toalha bem como avaliar a qualidade sanitária das sementes, desinfestadas ou não com hipoclorito de sódio, a 2%. O estudo foi conduzido, com sementes de pinhão-manso extraídas de frutos maduros, coletados na planta. O teste de germinação foi conduzido nas temperaturas de 25 ºC e alternadas de 20-30 ºC, com contagens aos 6, 9 e 12 dias. O teste de sanidade foi conduzido a 20 ºC com fotoperíodo de 12 h por 7 dias. Foi utilizado o delineamento experimental inteiramente casualizado com quatro repetições e empregado o teste F na análise de variância dos dados de germinação e do índice de velocidade de germinação. As médias foram comparadas pelo teste de Tukey a 5% de probabilidade. O potencial máximo de germinação das sementes de pinhão-manso foi obtido na temperatura de 25 ºC, com contagens aos seis, nove e 12 dias, entretanto não apresentou diferença significativa com as temperaturas de 20-30 ºC, nas contagens aos 9 e 12 dias. As sementes de pinhão-manso analisadas apresentaram alta frequência de espécies fúngicas, independente da desinfestação superficial. A incidência de fungos em ordem decrescente foi dos gêneros: Alternaria, Macrophomina, Cladosporium, Colletotrichum, Fusarium, Pestalotiopsis, Phoma, Helminthosporium, Epicocum e Nigrospora a maioria destes fungos apresenta potencial patogênico.

Effect of the type of environmental stress on the emergence of sunflower (Helianthus annus L.), soybean (Glycine max (L.) Merril) and maize (Zea mays L.) seeds with different levels of vigor

Sowing is a critical time in the cycle of a crop and the seeds are frequently exposed to adverse conditions that may compromise the establishment of seedlings in the field. on this basis, the objective of the present study was to determine the effect of types of environmental stress on the emergence of sunflower, maize and soybean seeds with different levels of vigor. High vigor seeds were artificially aged in order to obtain medium and low vigor seeds and then they were sown in clay soil in plastic boxes and submitted to the following types of environmental stress during the germination process : 1) high temperature (35degreesC), 2) low temperature (15 or 18degreesC), 3) water excess (Psi > -0.0001 MPa), 4) water deficiency (Psi approximately equal to -1.1; -1.2 and -0.6 MPa for sunflower, maize and soybean, respectively), 5) sowing at a depth of 7 cm and 6) pathogenic infection of sunflower seeds with Alternaria helianthi, of maize seeds with Fusarium moniliforme and of soybean seeds with Colletotrichum dematium, var. truncata. The results were compared to those obtained with controls sown under optimal condition. It was concluded that: 1) the effect of seed vigor on emergence depends on the type of enviromental stress to which the seeds are exposed, 2) the stress to which the the seeds demonstrated highest sensitivity varied with species and 3) high temperature stress was the one that most impaired the emergence of the three species.

rDNA-based characterization of a new binucleate Rhizoctonia spp. causing root rot on kale in Brazil

In this paper we present the first report of the occurrence of a binucleate Rhizoctonia spp. causing hypocotyl and root rot in kale in Brazil. Rhizoctonia spp. were isolated from kale (Brassica oleracea var. acephala) with symptoms of hypocotyl and root rot. The isolates, characterized as binucleate Rhizoctonia spp., did not show an anastomosis reaction with any of the binucleate Rhizoctonia spp. testers used. The pathogenicity of the isolates was tested under greenhouse conditions; all isolates were pathogenic and showed different symptom severities on kale. The ITS-5.8S rDNA sequences of kale isolates and 50 testers (25 binucleate Rhizoctonia spp. and 25 Rhizoctonia solani) were compared in order to characterize the genetic identity of Rhizoctonia spp. infecting kale. The kale isolates showed genetic identities ranging from 99.3 to 99.8% and were phylogenetically closely related to CAG 7 (AF354084), with identities of 98.5 and 98.7%. It is suggested that the binucleate Rhizoctonia spp. causing hypocotyl and root rot on kale Brazil comprises a new AG not yet described.

Diversidade de bactérias de solo sob vegetação natural e cultivo de hortaliças

The microorganisms are essential components in the maintenance of the biological and physicochemical balance of the soil. They exert important function including the degradation of residues of plants and animals and the release of nutrients in the alimentary chain. This work had as objective to compare the microbiota of a soil under bush covering (SMS) and other cropped with vegetables (SHC), suppressive or not it Rhizoctonia solani. Total microbial community DNA was extracted of soils, amplification for PCR of the genes 16S rDNA, inserted into pGEM (R)-T cloning vector and sequencing of the genes of the ribosomal RNA. The analysis of the results demonstrated that this methodology was efficient for evaluation of bacteria in ground. In the bush soil suppressive the microorganisms more found belonged to the phyla of the Acidobacterias, Verrucomicrobia and Actinobacterias and in the soil cultivated with vegetables the biggest frequency was of organisms pertaining to the phyla of the Proteobacterias, Firmicutes and Bacteroidetes.

Qualidade fisiológica e sanitária de sementes de feijoeiro (Phaseolus vulgaris L.) provenientes do estado de Goiás

The common beans (Phaseolus vulgaris L.) is a fabacea sufficiently spread out in all domestic territory. However, the quality of its seeds represents one of the main causes of low productivity in the beans farmings in Brazil. The objective of this work was to evaluate physiological and sanitary seed qualities of eleven bean cultivars. The physiological seed quality was evaluated trough standard germination and vigor tests. The sanitary seed quality was evaluated through two tests: blotter test was employed to evaluate fungi incidence and Koch & Menten method was employed to observe Sclerotinia sclerotiorum (Lib) de Bary occurrence. Xamego, BRS Valente, Bambu and Pérola had the best results of physiological tests. Jalo Precoce, Roxo 90, Corrente and Aporé had no good results of vigor and germination, besides presenting the lowest indices of died seeds. Fusarium sp., Aspergillus spp., Penicillium sp., Phoma sp., Rhizopus sp. and Botrytis sp. were the fungi detected in the sanity tests.

Qualidade fisiológica e sanitária de sementes de mamona submetidas a diferentes tratamentos químicos

The use of fungicides for treating seeds has become an essential measure in the control of pathogens. However, the effectiveness of many products is not well-known to some crops. The objective of this research was to evaluate the effect of different doses of carbendazin and carboxin + thiram fungicides for controlling pathogens and their interference on the physiologic quality of castor bean seeds. The test consisted of the following treatments (g i.a./100 kg of seeds): carbendazin (15, 30, and 60), carboxin + thiram (25 + 25, 50 + 50, and 100 + 100), formol 0.15% (v/v), and control (distilled water). The physiologic quality of the seeds was determined by germination, first counting, field emergence, speed emergence index, length, fresh and dry weight of the aerial part, and electrical conductivity. There were no statistical differences for germination and fresh and dry matter index. The treatment with formol provided lower values for first counting and field emergence. Seeds treated with fungicides presented higher values for electrical conductivity, but did not differ, statistically, among themselves. The fungi Cladosporium spp.; Bipolaris spp.; Curvularia spp.; Aspergillus flavus; Aspergillus niger; Rhizopus sp.; Penicillium sp.; Rhizoctonia sp.; Verticillium sp.; Fusarium sp.;Arthrobotrys sp.; and Epicocum sp. were identified. All tested products, independently of the dose, provided efficient control for pathogens.

Sementes de feijão-caupi (Vigna unguiculata L. (Walp), tratadas com extrato de folhas de nim (Azadirachta indica A. Juss.) avaliação da germinação e da incidência de fungos

This study aimed to evaluate the effect of aqueous extract of neem on germination and fungi incidence on seeds of three cultivars (Serrinha, BR 17 and Maranhão) of cowpea. Neem leaves were dryed, crushed and prepared dilutions of 0.5; 1.0; 2.0, 4.0 g dm -3and control. The fungi incidence was evaluated by the test filter paper and germination according to the Rules for Seeds Testing (Regras para Análise de Sementes). In the three cultivars analyzed, reduction in the incidence of Aspergillus sp and Fusarium sp was observed. In relation to the influence of extracts of neem leaves on seed germination, significant effect of extract in Maranhão cultivar was observed, where all concentrations differed from the control, and propovided a considerable increase in the percentage of normal seedlings. It was concluded that the leaf extract of neem was effective in controlling Aspergillus sp, Fusarium sp , Phoma sp and Macrophomina phaseolina at different concentrations in different cultivars and seed germination was stimulated for the Maranhão cultivar.