Bidens mosaic virus: detecção via RT-PCR e identificação de Galinsoga parviflora como um novo hospedeiro natural do vírus

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Avaliação de danos causados pelo Tomato severe rugose virus (ToSRV) em cultivares de pimentão

A espécie Tomato severe rugose virus (ToSRV) é a predominante em áreas de cultivo de pimentão no Estado de São Paulo. Sua ocorrência na cultura é relativamente recente de modo que não existem informações sobre os danos causados nesta cultura. Os objetivos do presente trabalho foram avaliar a produtividade e qualidade dos frutos de pimentão de três cultivares (Magda, Amanda e Rubia R) quando infectadas com o ToSRV. Verificou-se acentuada redução no número de frutos e menor crescimento das plantas, porém, o ToSRV não influenciou significativamente na massa, diâmetro e comprimento dos frutos. Os resultados obtidos até o momento permitem concluir que o ToSRV causa danos em pimentão e que há necessidade de estudos visando resistência ao ToSRV.

Macronutrientes em cultivares de gérbera sob dois níveis de fertirrigação

A gérbera de vaso é uma planta ornamental conhecida mundialmente; entretanto, dispõem-se de reduzido volume de informações sobre suas técnicas de cultivo, em especial a nutrição e adubação, fatores essenciais para ganhos na qualidade produtiva. O presente trabalho teve por objetivo avaliar o teor e o acúmulo de macronutrientes em quatro cultivares de gérbera sob dois níveis de fertirrigação. O experimento foi conduzido em casa de vegetação, de maio a julho de 2006, na UNESP em Botucatu. O mesmo foi instalado em blocos casualizados e constituído de um fatorial 4x2, sendo 4 cultivares de gérbera (Cherry, Golden Yellow, Salmon Rose e Orange) e 2 concentrações de solução nutritiva (50% e 100%), correspondendo respectivamente às condutividades elétricas de 0,92 e 1,76 dS m-1, no período vegetativo e 1,07 e 2,04 dS m-1, no reprodutivo. Os nutrientes foram aplicados via fertirrigação, realizada manualmente, uma vez ao dia. Ao final dos períodos vegetativo e reprodutivo foram quantificados no tecido vegetal, os teores e os acúmulos dos macronutrientes. As demandas destes nutrientes foram diferenciadas entre as cultivares e a concentração da solução apresentou um efeito marcante no teor e acúmulo de N, P, Ca, Mg e S na planta. Os maiores acúmulos foram registrados no terço final do ciclo de produção, apresentando a seguinte ordem de absorção: K>N>Ca>Mg>P>S (415, 327, 33, 32, 20 mg planta-1).

Efeito da compactação do solo no desenvolvimento aéreo e radicular de cultivares de milho

O objetivo deste trabalho foi avaliar o desenvolvimento aéreo e radicular de duas cultivares de milho (Zea mays L.), em solo submetido a quatro níveis de compactação. Utilizou-se um Latossolo Vermelho-Escuro distroférrico de textura média, em vasos montados com anéis de PVC sobrepostos, com diâmetro interno de 14,5 cm e altura de 35 cm. Os níveis de compactação utilizados em subsuperfície foram caracterizados pelas densidades do solo de 1,28, 1,42, 1,56 e 1,69 Mg m³. As cultivares de milho foram o híbrido AG-5011 e a variedade Sol da Manhã. Aos 40 dias após a emergência das plantas, determinaram-se as massas da matéria seca da parte aérea e das raízes, a densidade do comprimento radicular e o diâmetro médio radicular. A compactação do solo comprometeu o desenvolvimento das plantas de milho híbrido e da variedade na mesma intensidade. Apesar de alterar a distribuição do sistema radicular ao longo do perfil do solo, o impedimento físico em subsuperfície não diminuiu a produção total de raízes de milho. O diâmetro médio radicular apresentou alta correlação com o crescimento de raízes no solo compactado. O sistema radicular do milho não é capaz de romper uma camada compactada de solo com resistência mecânica da ordem de 1,4 MPa.

Exportação de nutrientes e qualidade de cultivares de rosas em campo e em ambiente protegido

Foram avaliadas a exportação de nutrientes por cultivares de rosas e as características que refletem qualidade em campo e ambiente protegido. O delineamento experimental foi inteiramente casualizado, sendo os tratamentos constituídos por 15 e 12 cvs. em ambiente protegido e em campo, respectivamente, com três repetições. Cada unidade experimental foi constituída por duas plantas, sendo coletada uma haste por planta. Foram determinados o diâmetro da haste e do botão floral, comprimento da haste, fitomassa seca e acúmulo de macro e micronutrientes pelas hastes colhidas. Plantas que apresentaram hastes com maior comprimento e diâmetro apresentaram também maiores quantidades de nutrientes extraídos. Os nutrientes extraídos em maiores quantidades foram o N e o K. Com base na quantidade de nutrientes extraídos é possível que se faça o agrupamento de cvs. para estabelecer uma recomendação de fertilizantes para as cvs. com exigência nutricional semelhante.

Absorção e translocação de fósforo em dois cultivares de mamoneira (Ricinus communis L.), 'Campinas' e 'Guarani', com uso de 32p

Com o objetivo de estudar a absorção e translocação do fósforo na cultura da mamoneira, instalou-se um ensaio em vasos com os cultivares 'Campinas' e 'Guarani' e empregou-se o fósforo radioativo (32p) como traçador. Os quatro tratamentos constaram da aplicação ao solo de 65 ppm de P contendo 32p, quando as plantas apresentavam seis, nove, doze e quatorze folhas, respectivamente e cortadas com nove, doze e quatorze folhas e as do quarto tratamento após 21 días da aplicação do fertilizante marcado. Através dos dados obtidos, pode-se concluir que, neste solo com baixo teor de fósforo, a aplicação deste elemento, na época da emissão de ínflorescências primárias, não influi no desenvolvimento das inflorescências, uma vez que se formam as expensas de fósforo previamente acumulado no pecíolo e no limbo, e que para lá se desloca a fim de participar do metabolismo de formação e desenvolvimento. em outros termos, o fósforo, quando aplicado tardiamente, não incrementará a produção dos cachos primários e, consequentemente, não pode esperar que o potencial máximo do cultivar seja atingido, pois os cachos primários representam, no mínimo, 30% da produção total da mamoneira.

Análise de séries temporais de coordenadas estimadas com GPS: uma proposta metodológica para detecção, remoção e recuperação de efeitos sazonais

GPS active networks are more and more used in geodetic surveying and scientific experiments, as water vapor monitoring in the atmosphere and lithosphere plate movement. Among the methods of GPS positioning, Precise Point Positioning (PPP) has provided very good results. A characteristic of PPP is related to the modeling and/or estimation of the errors involved in this method. The accuracy obtained for the coordinates can reach few millimeters. Seasonal effects can affect such accuracy if they are not consistent treated during the data processing. Coordinates time series analyses have been realized using Fourier or Harmonics spectral analyses, wavelets, least squares estimation among others. An approach is presented in this paper aiming to investigate the seasonal effects included in the stations coordinates time series. Experiments were carried out using data from stations Manaus (NAUS) and Fortaleza (BRFT) which belong to the Brazilian Continuous GPS Network (RBMC). The coordinates of these stations were estimated daily using PPP and were analyzed through wavelets for identification of the periods of the seasonal effects (annual and semi-annual) in each time series. These effects were removed by means of a filtering process applied in the series via the least squares adjustment (LSQ) of a periodic function. The results showed that the combination of these two mathematical tools, wavelets and LSQ, is an interesting and efficient technique for removal of seasonal effects in time series.

Morfologia matemática aplicada à detecção de sombras e nuvens em imagens de alta resolução

The spatial resolution improvement of orbital sensors has broadened considerably the applicability of their images in solving urban areas problems. But as the spatial resolution improves, the shadows become even a more serious problem especially when detailed information (under the shadows) is required. Besides those shadows caused by buildings and houses, clouds projected shadows are likely to occur. In this case there is information occlusion by the cloud in association with low illumination and contrast areas caused by the cloud shadow on the ground. Thus, it's important to use efficient methods to detect shadows and clouds areas in digital images taking in count that these areas care for especial processing. This paper proposes the application of Mathematical Morphology (MM) in shadow and clouds detection. Two parts of a panchromatic QuickBird image of Cuiab-MT urban area were used. The proposed method takes advantage of the fact that shadows (low intensity - dark areas) and clouds (high intensity - bright areas) represent the bottom and top, respectively, of the image as it is thought to be a topographic surface. This characteristic allowed MM area opening and closing operations to be applied to reduce or eliminate the bottom and top of the topographic surface.

Avaliação de estratégias de detecção e correção de perdas de ciclos na portadora GPS L1

To prevent large errors in the GPS positioning, cycle slips should be detected and corrected. Such procedure is not trivial, mainly for single frequency receivers, but normally it is not noticed by the users. Thus, it will be discussed some practical and more used methods for cycle slips detection and correction using just GPS single-frequency observations. In the detection, the triple (TD) and tetra differences were used. In relation to the correction, in general, each slip is corrected in the preprocessing. Otherwise, other strategies should be adopted during the processing. In this paper, the option was to the second option, and two strategies were tested. In one of them, the elements of the covariance matrix of the involved ambiguities are modified and new ambiguity estimation starts. In the one, a new ambiguity is introduced as additional unknown when a cycle slip is detected. These possibilities are discussed and compared in this paper, as well as the aspects related to the practicity, implementation and viability of each one. Some experiments were carried out using simulated data with cycle slips in different satellites and epochs of the data. This allowed assessing and comparing the results of different occurrence of cycle slip and correction in several conditions.

Crescimento vegetativo e características dos frutos de cinco cultivares de abacaxi na região de Bauru-SP

Avaliaram-se o crescimento vegetativo e a produção de cultivares novas e tradicionais de abacaxi na região de Bauru. As cultivares estudadas foram: 'Smooth Cayenne', 'Jupi', 'Imperial', 'Gold' e 'Gomo de Mel'. As mudas foram obtidas por cultura de tecidos pela empresa BIONOVA a partir de plantas-matrizes cedidas pela Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) Mandioca e Fruticultura Tropical e por produtores comerciais e passaram por um período de 100 dias de aclimatação em telado acondicionadas em tubetes. O plantio no campo foi realizado em canteiros revestidos com 'mulching' plástico preto em janeiro de 2007. O delineamento foi em blocos casualizados, com quatro repetições. Cada parcela apresentou 32 plantas, e o sistema de plantio foi em linhas duplas, no espaçamento 0,30 x 0,50 x 1,0 m. A avaliação dos tratamentos foi baseada na determinação do nível de crescimento vegetativo (massa e comprimento da folha 'D' e diâmetro do caule) e nas características físicas dos frutos. Os resultados obtidos foram submetidos à análise de variância e ao teste de Tukey, a 5% de probabilidade. Nas condições ambientais da região de Bauru (SP), e considerando o uso de mudas obtidas por cultura de tecidos, os resultados deste trabalho indicaram a superioridade das cultivares 'Gold', 'Smooth Cayenne' e 'Jupi' em relação a 'Imperial' e 'Gomo de Mel', com crescimento vegetativo maior e produção de frutos mais pesados.

Indicadores de cálcio e de voltagem codificados geneticamente na detecção de potenciais de ação e inputs sinápticos em cultura de neurônios hipocampais

Recently, genetically encoded optical indicators have emerged as noninvasive tools of high spatial and temporal resolution utilized to monitor the activity of individual neurons and specific neuronal populations. The increasing number of new optogenetic indicators, together with the absence of comparisons under identical conditions, has generated difficulty in choosing the most appropriate protein, depending on the experimental design. Therefore, the purpose of our study was to compare three recently developed reporter proteins: the calcium indicators GCaMP3 and R-GECO1, and the voltage indicator VSFP butterfly1.2. These probes were expressed in hippocampal neurons in culture, which were subjected to patchclamp recordings and optical imaging. The three groups (each one expressing a protein) exhibited similar values of membrane potential (in mV, GCaMP3: -56 ±8.0, R-GECO1: -57 ±2.5; VSFP: -60 ±3.9, p = 0.86); however, the group of neurons expressing VSFP showed a lower average of input resistance than the other groups (in Mohms, GCaMP3: 161 ±18.3; GECO1-R: 128 ±15.3; VSFP: 94 ±14.0, p = 0.02). Each neuron was submitted to current injections at different frequencies (10 Hz, 5 Hz, 3 Hz, 1.5 Hz, and 0.7 Hz) and their fluorescence responses were recorded in time. In our study, only 26.7% (4/15) of the neurons expressing VSFP showed detectable fluorescence signal in response to action potentials (APs). The average signal-to-noise ratio (SNR) obtained in response to five spikes (at 10 Hz) was small (1.3 ± 0.21), however the rapid kinetics of the VSFP allowed discrimination of APs as individual peaks, with detection of 53% of the evoked APs. Frequencies below 5 Hz and subthreshold signals were undetectable due to high noise. On the other hand, calcium indicators showed the greatest change in fluorescence following the same protocol (five APs at 10 Hz). Among the GCaMP3 expressing neurons, 80% (8/10) exhibited signal, with an average SNR value of 21 ±6.69 (soma), while for the R-GECO1 neurons, 50% (2/4) of the neurons had signal, with a mean SNR value of 52 ±19.7 (soma). For protocols at 10 Hz, 54% of the evoked APs were detected with GCaMP3 and 85% with R-GECO1. APs were detectable in all the analyzed frequencies and fluorescence signals were detected from subthreshold depolarizations as well. Because GCaMP3 is the most likely to yield fluorescence signal and with high SNR, some experiments were performed only with this probe. We demonstrate that GCaMP3 is effective in detecting synaptic inputs (involving Ca2+ influx), with high spatial and temporal resolution. Differences were also observed between the SNR values resulting from evoked APs, compared to spontaneous APs. In recordings of groups of cells, GCaMP3 showed clear discrimination between activated and silent cells, and reveals itself as a potential tool in studies of neuronal synchronization. Thus, our results indicate that the presently available calcium indicators allow detailed studies on neuronal communication, ranging from individual dendritic spines to the investigation of events of synchrony in neuronal networks genetically defined. In contrast, studies employing VSFPs represent a promising technology for monitoring neural activity and, although still to be improved, they may become more appropriate than calcium indicators, since neurons work on a time scale faster than events of calcium may foresee

Detecção de bactérias periodontopatogênicas cultiváveis e não cultiváveis em placas ateromatosas

Periodontal infections consist of a group of inflammatory conditions caused by microorganisms that colonize the tooth surface through the formation of dental biofilm. Chronic infections such as periodontitis have been associated to the development and progression of atherosclerosis. AIM: Detect cultivatable and non-cultivatable periodontopathogenic bacteria in atheromatous plaques; search for factors associated to the presence of these bacteria in the atheromatous plaques and characterize the presence of cultivatable and non-cultivatable bacteria in these plaques. METHODOLOGY: A cross-sectional study was performed with a sample of 30 patients diagnosed with atherosclerosis in the carotid, coronary or femoral arteries and surgically treated with angioplasty and stent implant, bypass or endarterectomy. The plaques were collected during surgery and analyzed using the PCR molecular technique for the presence of the DNA of the cultivatable bacteria Aggregatibacter actinomycetemcomitans, Porphyromonas gingivalis and Treponema denticola and of the non-cultivatable Synergistes phylotypes. The patients were examined in the infirmary, after the surgery, where they also responded to a questionnaire aimed at determining factors associated to the presence of periodontopathogenic bacteria in the atheromatous plaques. RESULTS: All patients with tooth (66,7%) possessed disease periodontal, being 95% severe and 65% widespread. No periodontopathogenic bacteria were found in the atheromatous plaques. However, four samples (13.3%) were positive for the presence of bacteria. Of these, three participants were dentate, being two carriers of widespread severe chronic periodontite and one of located severe chronic periodontitis. None of them told the accomplishment of procedures associated to possible bacteremia episodes, as treatment endodontic, extraction the last six months or some procedure surgical dental. CONCLUSION: The periodontopathogenic bacteria studied were not found in the atheromatous plaques, making it impossible to establish the prevalence of these pathogens or the factors associated to their presence in plaques, the detection of positive samples for bacteria suggests that other periodontal and non-periodontal pathogens be studied in an attempt at discovering the association or not between periodontal disease and/or others infections and atherosclerosis, from the presence of these bacteria in atheromas

Estudo da detecção do DNA do papiloma vírus humano (HPV) e da expressão imuno-histoquímica de proteína do ciclo celular no carcinoma epidermóide oral

Oral squamous cell carcinoma (OSCC) is the most common malignancy in oral cavity and human papillomavirus (HPV) may have an important role in its development. The aim of this experiment was to investigate the HPV DNA and viral types in 90 cases of OSCC. Moreover, a comparative analysis between the cases of OSSC with and without HPV DNA was performed by using cell cycle markers p21 and pRb in order to detect a possible correlation of these proteins and HPV infection. DNA was extracted from paraffin embedded tissue and amplified by PCR (polymerase chain reaction) with primers PCO3+ e PCO4+ for a fragment of human β-globin gene. After this procedure, PCR for HPV DNA detection was realized using a pair of generic primers GP5+ e GP6+. Immunohistochemical study was performed by streptoavidin-biotin technique and antibodies against p21 and pRb proteins were employed. Eighty-eight cases were positive for human β-globin gene and HPV DNA was found in 26 (29.5%) of then. It could not be detected significant correlation between HPV and age, sex and anatomical sites of the lesion. The most prevalent viral type was HPV 18 (80.8%). Regarding the immunohistochemical analysis, it was detected significant association between HPV presence and pRb immunoexpression (p=0,044), nevertheless, the same was not observed in relation to p21 protein (p =0,416). It can be concluded that the low detection of HPV DNA in OSCC by the present experiment suggests a possible role of the virus in the development and progression in just a subset of this disease

Detecção de cor e forma por Callithrix jacchus em cativeiro

Callithrix jacchus studies involving differences between the sexes regarding the performance on tasks food still offers room for the investigation of some factors, among them there is the differences in color vision, which can directly influence the detection of visual clues on food items. This study aimed to analyze the performance of C. jacchus in tasks involving detection of food items. Some factors were analyzed such as the differences in performance between the sexes and behavioral categories present during the task. There were no differences in performance between the animals in carrying out the task, for all situations presented, examining the behavioral categories observed. The fact of the task to be very simple might have influenced the results, and it was not possible to observe differences in performance. Males and females showed the same performance in all analyzed situations. The sex differences were not found possibly due to the influence of external factors, such as the structure of the experimental apparatus. The animals are more efficient in carrying out the task during the morning, in comparison to the afternoon. The light may have been one of the factors that influenced these results. Due to the influence of other factors that probably contributed to these results, we believe that different results can be found in future work

Detecção de predadores por dicromatas e tricromatas humanos e a sua implicação na evolução da visão de cores em primatas

Among placental mammals, primates are the only ones to present trichromatic color vision. However, the distribution of trichromacy among primates is not homogeneous: Old World primates shows an uniform trichromacy (with all individuals being trichromats) and New World primates exhibit a color vision polymorphism (with dichromatic males and dichromatic or trichromatic females). Visual ecology studies have investigated which selective pressures may have been responsible for the evolution of trichromacy in primates, diverging from the dichromat standard found in other mammals. Cues associated with foraging and the socio-reproductive status were analyzed, indicating a trichromatic advantage for the rapid detection of visually conspicuous objects against a green background. However, dichromats are characterized by an efficient capture of cryptic and camouflaged stimuli. These advantages regarding phenotype may be responsible for the maintenance of the visual polymorphism in New World primates and for the high incidence of color blindness in humans (standing around 8% in Caucasian men). An important factor that has not yet been experimentally taken into account is the predation risk and its effect on the evolution of trichromacy in primates. To answer this question, we prepared and edited pictures of animals with different coats: oncillas (Leopardus spp.), puma (Puma concolor) and ferret (Galictis cuja). The specimens were taxidermized and the photographs were taken in three different vegetation scenarios (dense forest, cerrado and grassland). The images of the predators were manipulated so that they fit into two categories of stimulus size (small or large). After color calibration and photo editing, these were presented to 40 humans (20 dichromats and 20 trichromats) by a computer program, which presented a set of four photos at a time (one picture containing the taxidermized animal amid the background vegetation and three depicting only the background vegetation) and recorded the response latency and success rate of the subjects. The results show a trichromatic advantage in detecting potential predators. The predator detection was influenced by the background, the predator species, the dimension of the stimulus and the observer s visual phenotype. As humans have a high rate of dyschromatopsias, when compared to wild Catarrhini or human tribal populations, it is possible that the increased rate of dichromats is a result of reduced pressure for rapid predator detection. Since our species came to live in more cohesive groups and resistant to attack by predators, with the advent of agriculture and the formation of villages, it is possible that the lower risk of predation has reduced the selection in favor of trichromats