Chromosomal rearrangements underlying karyotype differences between Chinese pangolin (Manis pentadactyla) and Malayan pangolin (Manis javanica) revealed by chromosome painting

The Chinese pangolin (Manis pentadactyla), a representative species of the order Pholidota, has been enlisted in the mammalian whole-genome sequencing project mainly because of its phylogenetic importance. Previous studies showed that the diploid number o

Benthic macro-biota in Gaula River - Kumaon Himalaya

The density of benthic macro-biota in number over weight of biomass at three sampling stations was 29 units m²/0.614 g m² to 171 units m²/11.346 m² at Station I; 22 units m²/0.410 g m² to 155 units m²/8.717 m² at Station II; 15 units m² 10.321 g m² to 122 units m²/6.793 g m² at Station III. The Caddis fly larvae were the most dominant component and contributed 52.41% in the macro-biota. These animals were abundant in Gaula River when benthic algae were abundant; water is well oxygenated, alkaline and contains sufficient nutrients but observed to be less abundant during high velocity of water, high river depth and higher turbid waters.

Distribution of CCR2-64I and SDF1-3 ' A alleles and HIV status in 7 ethnic populations of Cameroon

Limited information is available on the prevalence among rural Africans of host genetic polymorphisms conferring resistance to HIV-1 infection or slowing HIV disease progression.We report the allelic frequencies of the AIDS-related polymorphisms CCR2-64I, SDF1-3#A, and CCR5-D32 in 321 volunteers from 7 ethnic groups in Cameroon. Allelic frequencies differed among the 7 ethnic groups, ranging from 10.8% to 31.3% for CCR2-64I and 0.0% to 7.1% for SDF1-3#A. No CCR5-D32 alleles were found. HIV seroprevalence was 6.9% in the total population and peaked at younger ages in girls and women than in boys and men. Among 15- to 54-year-olds, HIV seroprevalence varied from 2.0% to 11.1% among the village populations. Conditional logistic regression analysis using data from boys and men aged 15 to 54 years showed the number of CCR2-64I alleles to be a significant risk factor for HIV seropositivity (odds ratio per allele adjusted for age and matched on ethnic group = 6.3, 95% confidence interval: 1.3–30.3); this association was not found in women. The findings are consistent with the hypothesis that CCR2-64I alleles may delay HIV disease progression without affecting susceptibility to infection among men. We did not observe this relation among women, and other factors, such as multiple pregnancies or maternal stressors (eg, breastfeeding), may have masked any protective effect of CCR2-64I alleles. Further study of this issue among women is warranted. SDF1-3#A did not differ between HIV-seropositive and HIV-seronegative individuals but wasassociated with increasing age among HIV-seronegative women, suggesting a protective effect against HIV-1 infection.

Energy substrate requirement for in vitro maturation of oocytes from unstimulated adult rhesus monkeys

The energy substrates lactate, pyruvate, and glucose were evaluated for supporting in vitro cytoplasmic maturation of rhesus monkey oocytes. A total of 321 cumulus-oocyte complexes (COCs) aspirated from greater than or equal to 1000 mum diameter follicles

Pontibacter akesuensis sp nov., isolated from a desert soil in China

A Gram-negative, non-motile, rod-shaped bacterium, designated strain AKS 1 T, was isolated from a desert soil sample collected from Alkesu, Xin.lang Province, China. A taxonomic study, including phylogenetic analysis based on 16S rRNA gene sequences and p

Morphometric characteristics and meristic traits of Tilapia zillii from three major dams of a southwestern state, Nigeria

Tilapia zillii was examined in three major dams in Ekiti State, Nigeria (Ureje dam, Ado, Egbe dam and Ero dam) for their morphometric characteristics and meristic traits. The results showed that the average body weight of the fish sampled were 145.86±50.06g in Ado, 30.19±9.35g in Egbe and 40.58±52.30g in Ero dam. Average total lengths were 21.29±3.20cm, 12.32±1.74cm and 11.24±1.56cm for Ado, Egbe and Ero dam respectively. The relationship between average weight and length of T. zillii showed that Y=15.202X-179.33 (R2=0.7181), Y=4.40049±-24.075 (R2=0.6708) and Y=2.6676X10.596 (R2=0.0063) for Ado, Egbe and Ero dam respectively. The results on headlength, total length, body weight and standard length and pre-pelvic distance are significantly different at 95% among the T.zillii of the three dams. There was no significant difference in the meristic traits of the T. zillii of the three dams. The population size of T.zillii in the three dams was just too small compared to other species of fish hence the need to assess the stock of fish in these dams critically for the encouragement of proper fishing activities in these dams.

A new method for venom extraction from venomous fish, green scat

Scatophagus argus argus (Green Scat) is a pretty aquarium fish. Its hard spines are venomous and can cause painful injury. In this study 60 specimens of Green Scat were collected periodically from coastal waters of Boushehr (south of Iran) from May 2011 to April 2012. Anatomical features of venomous spines were investigated. Scat venom was extracted from the spines in a new manner for keeping the specimens alive. The nature of venom was tested by SDS-PAGE. Ethical issues and animal welfare principles such as rapid and instantaneous anesthetizing, post operation disinfection and fast recovery of the specimens was practiced in order to minimize the complications. This method enhanced the purity and quantity of venom as demonstrated by 12 separated proteins in electrophoresis. New ethical issues were developed to surviving the specimens and prolong viability as well.

人类线粒体DNA变异的检测方法和思路

基于线粒体DNA(mtDNA)的研究对于人群源流迁移、线粒体相关疾病病因的探讨和法医鉴定等具有重要意义,就检测人线粒体突变的一些常用方法,如RFLP、SSO和控制区测序等作一小结和归纳,并重点介绍目前mtDNA突变的筛选方法和思路。另外,还总结了近年来对人mtDNA方面的研究结果,对世界人群中主要单倍型类群(haplogroup)特征变异位点和相应的酶切检测引物作了归纳。

The Acquisition of an Inheritable 50-bp Deletion in the Human mtDNA Control Region Does Not Affect the mtDNA Copy Number in Peripheral Blood Cells

The mitochondrial DNA (mtDNA) control region is believed to play an important biological role in mtDNA replication. Large deletions in this region are rarely found, but when they do occur they might be expected to interfere with the replication of the molecule, thus leading to a reduction of mtDNA copy number. During a survey for mtDNA sequence variations in 5,559 individuals from the general Chinese population and 2,538 individuals with medical disorders, we identified a 50-bp deletion (m.298_347del50) in the mtDNA control region in a member of a healthy Han Chinese family belonging to haplogroup B4c1b2, as suggested by complete mtDNA genome sequencing. This deletion removes the conserved sequence block II (CSBII; region 299-315) and the replication primer location (region 317-321). However, quantification of the mtDNA copy number in this subject showed a value within a range that was observed in 20 healthy subjects without the deletion. The deletion was detected in the hair samples of the maternal relatives of the subject and exhibited variable heteroplasmy. Our current observation, together with a recent report for a benign 154-bp deletion in the mtDNA control region, suggests that the control of mtDNA replication may be more complex than we had thought. Hum Mutat 31:538-543, 2010. (C) 2010 Wiley-Liss, Inc.

天然来源具有抗HIV 活性的多肽和蛋白类化合物

　从天然药物中寻找高效低毒的抗HIV/ AIDS 活性化合物和先导化合物是国内外新药研制中非 常活跃的领域之一,也应该是我国近期创制新药的一条捷径。来源于动植物、海洋生物、微生物以及人体等中 的许多天然化合物具有抗HIV 活性。本文仅对天然来源的多肽和蛋白类化合物抗HIV 的研究简要综述。

Kilka population dynamics in the south of the Caspian Sea

Populations of kilka in the Caspian Sea have important role in the food chain. This study was conducted to determine population parameters of three species of kilka in the south of the Caspian Sea, during 2006-2007. Mean length was 102.4±9.7 mm for common kilka, 117.8±6.9 mm for anchovy and 119.5±10.9 mm for bigeye. The relationship between length and weight indicated the negative allometric growth in the all three species. Mean age for common kilka, anchovy and bigeye were 3.6, 4.6 and 4.6 years, respectively. Sex ratio (M:F) were 0.52:1 for anchovy, 0.60:1 for common kilka and 1.60:1 for bigeye. The value of growth coefficient (K) was the highest (0.321) for the common kilka, (0.267) for the bigeye, and the lowest for the anchovy kilka (0.245). Total mortality estimated from the descending of the catch curve using the age structure, Z=1.280 yr-1 for common kilka, Z=1.067 yr-1 for anchovy, and Z=1.015 yr-1 for bigeye. Natural mortality (M) were estimated using Pauly formula as M=0.622, M=0.537 and M=0.503 per year for common kilka, bigeye and anchovy, respectively. Value of fishing mortality (F) were estimated from Z and M, as F=0.658 for common kilka, F=0.564 for anchovy and F=0.478 for bigeye. The exploitation rate (E) were estimated E=0.514 for common kilka, E=0.528 for anchovy and E= 0.471 for bigeye. The estimate of MCY (Maximum Constant Yield) was calculated using the more reliable time series of commercial catch data from 2001-2007, which resulted in an estimate of MCY for the kilka fishery of 14100 tonnes.

广西云南鳅属鱼类一新种记述

2003年5月,在广西壮族自治区都安县高岭乡红水河水系采集到一批条鳅标本.经鉴定,为云南鳅属(Yunnanilius)一未经发表的新种.新种长须云南鳅(Yunnanilus longibarbatus sp. nov.) 属于黑斑云南鳅种组(Yunnanilus nigromaculatus group),并与黑斑云南鳅[Y.nigromaculatus (Regan)]、钝吻云南鳅(Y.obtusirostris Yang)、长背云南鳅(Y.longidorsalis Li, Tao et Lu)和巴江云南鳅(Y.bajingensis Li)等4种最为相似.长背云南鳅背鳍分枝鳍条11根,颌须短,仅达眼中部,背鳍起点距吻端较距尾鳍基为近,可与包括本种在内的其余4种相区别(背鳍分枝鳍条8-9根,颌须达到或超过眼后缘,背鳍起点距吻端较距尾鳍基为远).本种和钝吻云南鳅上颌中央无齿状突、下颌中央无缺刻,可与黑斑云南鳅和巴江云南鳅相区别.本种在鳍条数、上下颌、背鳍起点的位置、尾鳍形状、鳞片、头部侧线管孔、体侧纵纹等方面与钝吻云南鳅最为相似,但本种可藉多个特征与后者相区别:颌须伸过眼后缘至鳃盖后缘的中点至鳃盖后缘,是已知云南鳅中须最长的;背鳍不分枝鳍条下1/3处具一不显著黑色斑点 (vs. 无斑);体侧纵纹,其宽窄于眼径,较大个体背鳍之前的纵纹被虫状纹取代 (vs. 体侧纵纹始终存在,其宽约等于眼径);头背具斑点 (vs. 无斑);尾柄较细长,体长/尾柄长=5.3-6.1 (vs. 7.4-9.0,尾柄长/尾柄高=1.3-1.8 vs. 0.8-1.1).