STUDIES OF THE MOLECULAR MECHANISMS OF CHROMOSOME ABERRATION FORMATION (DNA REPAIR, CROSSLINKS, MITOMYCIN C)

The objective of this research has been to study the molecular basis for chromosome aberration formation. Predicated on a variety of data, Mitomycin C (MMC)-induced DNA damage has been postulated to cause the formation of chromatid breaks (and gaps) by preventing the replication of regions of the genome prior to mitosis. The basic protocol for these experiments involved treating synchronized Hela cells in G(,1)-phase with a 1 (mu)g/ml dose of MMC for one hour. After removing the drug, cells were then allowed to progress to mitosis and were harvested for analysis by selective detachment. Utilizing the alkaline elution assay for DNA damage, evidence was obtained to support the conclusion that Hela cells can progress through S-phase into mitosis with intact DNA-DNA interstrand crosslinks. A higher level of crosslinking was observed in those cells remaining in interphase compared to those able to reach mitosis at the time of analysis. Dual radioisotope labeling experiments revealed that, at this dose, these crosslinks were associated to the same extent with both parental and newly replicated DNA. This finding was shown not to be the result of a two-step crosslink formation mechanism in which crosslink levels increase with time after drug treatment. It was also shown not to be an artefact of the double-labeling protocol. Using neutral CsCl density gradient ultracentrifugation of mitotic cells containing BrdU-labeled newly replicated DNA, control cells exhibited one major peak at a heavy/light density. However, MMC-treated cells had this same major peak at the heavy/light density, in addition to another minor peak at a density characteristic for light/light DNA. This was interpreted as indicating either: (1) that some parental DNA had not been replicated in the MMC treated sample or; (2) that a recombination repair mechanism was operational. To distinguish between these two possibilities, flow cytometric DNA fluorescence (i.e., DNA content) measurements of MMC-treated and control cells were made. These studies revealed that the mitotic cells that had been treated with MMC while in G(,1)-phase displayed a 10-20% lower DNA content than untreated control cells when measured under conditions that neutralize chromosome condensation effects (i.e., hypotonic treatment). These measurements were made under conditions in which the binding of the drug, MMC, was shown not to interfere with the stoichiometry of the ethidium bromide-mithramycin stain. At the chromosome level, differential staining techniques were used in an attempt to visualize unreplicated regions of the genome, but staining indicative of large unreplicated regions was not observed. These results are best explained by a recombinogenic mechanism. A model consistent with these results has been proposed.^

The biologic and signaling effects of Tiam1 overexpression in colorectal carcinoma

Cellular migration is essential to many normal cellular processes. In tumor cells, aberrant activation of the normal pathways regulating migration is one of the critical steps in the development of metastasis. Previously, I demonstrated for the first time that overexpression of Tiam1, a guanine nucleotide exchange factor (GNEF) for small G proteins in the Rho family, could alter migration in colorectal tumor cells. ^ This dissertation focuses on the roles of Tiam1 in promoting cell migration, survival, and metastasis of colorectal carcinoma cells, utilizing the model system I developed. To determine the in vivo phenotype of the migratory cell lines, athymic nude mice were injected with cells into the orthotopic site. Several of the mice injected with cells of increased migratory potential had metastases. Thus, the in vitro selection for increased migration resulted in increased metastatic potential in vivo, and therefore, the Tiam1-overexpressing cells provide a model to examine signal transduction pathways important to this process. ^ To examine effects of Tiam1 signaling on small G proteins critical to cellular functions associated with migration, I examined the activation status of the small G proteins Rac, Rho, and Cdc42. The cells of increased migratory potential have increased GTP-bound Rac and Rho, compared to control SW480 cells. Cells that overexpress Tiam1 are more migratory and are resistant to detachment-induced death, or anoikis. To determine which effects and phenotypes were Tiam1-specific, we utilized siRNA to downregulate Tiam1 expression. These results demonstrate that Tiam1 is sufficient but not required for the migration of colorectal carcinoma cells in our model system, and that the biologically selected cells have additional changes that promote migration besides the increase in Tiam1. I also show that Tiam1 protects colorectal carcinoma cells from detachment-induced death, but is not required for anoikis resistance in the biologically selected migratory cells. ^ In summary, my studies demonstrate a heretofore-unknown regulator of phenotypes critical to the development of colorectal carcinoma metastases, overexpression of Tiam1. Understanding the mechanism by which Tiam1 contributes to cellular migration and metastasis is crucial to developing desperately needed new therapies for colorectal carcinoma. ^

T cell adhesion regulation from clustering GM1 lipid rafts

Lipid rafts are small laterally mobile cell membrane structures that are highly enriched in lymphocyte signaling molecules. Lipid rafts can form from the assembly of specialized lipids and proteins through hydrophobic associations from saturated acyl chains. GM1 gangliosides are a common lipid raft component and have been shown to be essential in many T cell functions. Current lipid raft theory hypothesizes that certain aspects of T cell signaling can be initiated from the coalescence of these signaling-enriched lipid rafts to sites of receptor engagement. We have described how the specific aggregation of GM1 lipid rafts can cause a reorganization of cell surface molecular associations which include dynamic associations of β1 integrins with GM1 lipid rafts. These associations had pronounced effects on T cell adhesive and migratory states. We show that GM1 lipid raft aggregation can dramatically inhibit T cell migration and chemotaxis on the extracellular matrix constituent fibronectin. This inhibition of migration function was shown to be dependent on the src kinase Lck and PKC-regulated F-actin polymerization to extending pseudopods. Furthermore, GM1 lipid raft clustering could activate T cell adhesion-strengthening mechanisms. These include an increase in cellular rigidity, the creation of polymerized cortical F-actin structures, the induction of high affinity integrin states, an increase in surface area and symmetry of the contact plane, and resistance to shear flow detachment while adherent to fibronectin. This indicates that GM1 lipid raft aggregation defines a novel stimulus to regulate lymphocyte motility and cellular adhesion which could have important implications in T cell homing mechanisms. ^

Chemistry of minerals from amphibole-chlorite veins of ODP Site 209-1270

We examined small-scale shear zones in drillcore samples of abyssal peridotites from the Mid-Atlantic Ridge. These shear zones are associated with veins consisting of chlorite + actinolite/tremolite assemblages, with accessory phases zircon and apatite, and they are interpreted as altered plagiogranite melt impregnations, which originate from hydrous partial melting of gabbroic intrusion in an oceanic detachment fault. Ti-in-zircon thermometry yields temperatures around 820°C for the crystallization of the evolved melt. Reaction path modeling indicates that the alteration assemblage includes serpentine of the adjacent altered peridotites. Based on the model results, we propose that formation of chlorite occurred at higher temperatures than serpentinization, thus leading to strain localization around former plagiogranites during alteration. The detachment fault represents a major pathway for fluids through the oceanic crust, as evidenced by extremely low d18O of altered plagiogranite veins (+3.0-4.2 per mil) and adjacent serpentinites (+ 2.6-3.7 per mil). The uniform oxygen isotope data indicate that fluid flow in the detachment fault system affected veins and adjacent host serpentinites likewise.

Oxygen and carbon isotope ratios of silicates and carbonates from exhumed peridotites in the Iberian Abyssal Plain

Legs 173 and 149 of the Ocean Drilling Program profiled a zone of exhumed mantle peridotite at the ocean-continent transition (OCT) beneath the Iberia Abyssal Plain. The zone of exhumed peridotite appears to be tens of kilometers wide and is situated between blocks of continental crust and the first products of ocean accretion. Exhumed peridotite is 95-100% serpentinised to probable depths of 2-3 km. Down core oxygen isotope profiles of serpentinised peridotite at Sites 1068 and 1070 (Leg 173) show evidence for two fluid infiltration events. The earlier event involved pervasive infiltration of comparatively warm (>175°C) sea water and accompanied serpentinisation. The later event involved structurally focused infiltration of comparatively cool (650-150°C) sea water and accompanied active mantle exhumation. We therefore conclude that the uppermost mantle was serpentinised before it was exhumed at the Iberian OCT. Implicit to this conclusion is that a sizeable region of serpentinised mantle existed directly beneath thinned but intact continental crust. Serpentinite has comparatively low density, low frictional strength and low permeability. The presence of such a "soft" layer may have localised deformation and consequently promoted detachment-style exhumation of the uppermost mantle. The low permeability of a serpentinite 'cap' layer might help to explain the lack of observed melt at the Iberian OCT.

Calcium concentrations and isotopic composition in carbonates and porefluids from ODP Hole 130-807A

The calcium isotopic compositions (d44Ca) of 30 high-purity nannofossil ooze and chalk and 7 pore fluid samples from ODP Site 807A (Ontong Java Plateau) are used in conjunction with numerical models to determine the equilibrium calcium isotope fractionation factor (a_s-f) between calcite and dissolved Ca2+ and the rates of post-depositional recrystallization in deep sea carbonate ooze. The value of a_s-f at equilibrium in the marine sedimentary section is 1.0000+/-0.0001, which is significantly different from the value (0.9987+/-0.0002) found in laboratory experiments of calcite precipitation and in the formation of biogenic calcite in the surface ocean. We hypothesize that this fractionation factor is relevant to calcite precipitation in any system at equilibrium and that this equilibrium fractionation factor has implications for the mechanisms responsible for Ca isotope fractionation during calcite precipitation. We describe a steady state model that offers a unified framework for explaining Ca isotope fractionation across the observed precipitation rate range of ~14 orders of magnitude. The model attributes Ca isotope fractionation to the relative balance between the attachment and detachment fluxes at the calcite crystal surface. This model represents our hypothesis for the mechanism responsible for isotope fractionation during calcite precipitation. The Ca isotope data provide evidence that the bulk rate of calcite recrystallization in freshly-deposited carbonate ooze is 30-40%/Myr, and decreases with age to about 2%/Myr in 2-3 million year old sediment. The recrystallization rates determined from Ca isotopes for Pleistocene sediments are higher than those previously inferred from pore fluid Sr concentration and are consistent with rates derived for Late Pleistocene siliciclastic sediments using uranium isotopes. Combining our results for the equilibrium fractionation factor and recrystallization rates, we evaluate the effect of diagenesis on the Ca isotopic composition of marine carbonates at Site 807A. Since calcite precipitation rates in the sedimentary column are many orders of magnitude slower than laboratory experiments and the pore fluids are only slightly oversaturated with respect to calcite, the isotopic composition of diagenetic calcite is likely to reflect equilibrium precipitation. Accordingly, diagenesis produces a maximum shift in d44Ca of +0.15? for Site 807A sediments but will have a larger impact where sedimentation rates are low, seawater circulates through the sediment pile, or there are prolonged depositional hiatuses.

Potpourri : Conjeturas y cavilaciones

Potpourri, la primera novela de Cambaceres, suscitó un importante debate moral acerca de los asuntos que trata, del estilo en que está escrita y de la displicencia de su narrador, a quien se asoció -sin mediaciones- con su autor. El artículo aborda ese estilo que en general se impugnó para proponer que es precisamente en la supuesta falta de forma y en el desapego a las convenciones, tanto como en la indolencia del narrador, donde radican su potencia narrativa y su carácter experimental. Siguiendo este hilo conceptual, se indagan ciertos aspectos específicos: el anonimato, el silbido, el chisme y los secretos a voces, y la arquitectura de la página

La música colosal del mundo : Entre el nihilismo y la higiene de estado

El proclamado hastío del narrador de Potpourri, la distancia y el desdén con que contempla el acontecer contrastan con su extrema agilidad discursiva. A la vez, el escepticismo con que encara los valores consagrados por la sociedad contemporánea se trocará en una posición demiúrgica y estatal cuando vea peligrar esos valores. Una vez más, el adulterio pone en crisis sociedad y literatura. Lo único que matiza el giro abrupto del narrador es una lengua ubicua y proteica, que atraviesa críticamente un amplísimo abanico de registros, modismos y géneros discursivos

Con el oficio en las manos. Las competencias como herramientas de continuidad en la trayectoria laboral : El caso de los ex obreros petroleros

En este artículo analizamos las transformaciones que la privatización de ypf trajo consigo en las trayectorias laborales de quienes eran sus trabajadores. En particular nos preocupamos por la relevancia que adquieren las competencias laborales en los caminos ocupacionales de los obreros que trabajaban en el sector mantenimiento y servicios de la refinería La Plata y que fueron desvinculados de la empresa debido a su desestatización. A partir de una investigación cualitativa en la que realizamos entrevistas en profundidad a ex obreros de esta unidad productiva, estudiamos las competencias que los trabajadores adquirían durante su desempeño en la refinería y el papel que jugaron las mismas en las trayectorias laborales posprivatización

Potpourri : Conjeturas y cavilaciones

Potpourri, la primera novela de Cambaceres, suscitó un importante debate moral acerca de los asuntos que trata, del estilo en que está escrita y de la displicencia de su narrador, a quien se asoció -sin mediaciones- con su autor. El artículo aborda ese estilo que en general se impugnó para proponer que es precisamente en la supuesta falta de forma y en el desapego a las convenciones, tanto como en la indolencia del narrador, donde radican su potencia narrativa y su carácter experimental. Siguiendo este hilo conceptual, se indagan ciertos aspectos específicos: el anonimato, el silbido, el chisme y los secretos a voces, y la arquitectura de la página

La música colosal del mundo : Entre el nihilismo y la higiene de estado

El proclamado hastío del narrador de Potpourri, la distancia y el desdén con que contempla el acontecer contrastan con su extrema agilidad discursiva. A la vez, el escepticismo con que encara los valores consagrados por la sociedad contemporánea se trocará en una posición demiúrgica y estatal cuando vea peligrar esos valores. Una vez más, el adulterio pone en crisis sociedad y literatura. Lo único que matiza el giro abrupto del narrador es una lengua ubicua y proteica, que atraviesa críticamente un amplísimo abanico de registros, modismos y géneros discursivos

Con el oficio en las manos. Las competencias como herramientas de continuidad en la trayectoria laboral : El caso de los ex obreros petroleros

En este artículo analizamos las transformaciones que la privatización de ypf trajo consigo en las trayectorias laborales de quienes eran sus trabajadores. En particular nos preocupamos por la relevancia que adquieren las competencias laborales en los caminos ocupacionales de los obreros que trabajaban en el sector mantenimiento y servicios de la refinería La Plata y que fueron desvinculados de la empresa debido a su desestatización. A partir de una investigación cualitativa en la que realizamos entrevistas en profundidad a ex obreros de esta unidad productiva, estudiamos las competencias que los trabajadores adquirían durante su desempeño en la refinería y el papel que jugaron las mismas en las trayectorias laborales posprivatización

Epibiotic assemblages on seaweeds in the German Wadden Sea (North Sea)

After detachment from benthic habitats, the epibiont assemblages on floating seaweeds undergo substantial changes, but little is known regarding whether succession varies among different seaweed species. Given that floating algae may represent a limiting habitat in many regions, rafting organisms may be unselective and colonize any available seaweed patch at the sea surface. This process may homogenize rafting assemblages on different seaweed species, which our study examined by comparing the assemblages on benthic and floating individuals of the fucoid seaweeds Fucus vesiculosus and Sargassum muticum in the northern Wadden Sea (North Sea). Species richness was about twice as high on S. muticum as on F. vesiculosus, both on benthic and floating individuals. In both seaweed species benthic samples were more diverse than floating samples. However, the species composition differed significantly only between benthic thalli, but not between floating thalli of the two seaweed species. Separate analyses of sessile and mobile epibionts showed that the homogenization of rafting assemblages was mainly caused by mobile species. Among these, grazing isopods from the genus Idotea reached extraordinarily high densities on the floating samples from the northern Wadden Sea, suggesting that the availability of seaweed rafts was indeed limiting. Enhanced break-up of algal rafts associated with intense feeding by abundant herbivores might force rafters to recolonize benthic habitats. These colonization processes may enhance successful dispersal of rafting organisms and thereby contribute to population connectivity between sink populations in the Wadden Sea and source populations from up-current regions.