Image Segmentation Using Information Bottleneck Method

In image processing, segmentation algorithms constitute one of the main focuses of research. In this paper, new image segmentation algorithms based on a hard version of the information bottleneck method are presented. The objective of this method is to extract a compact representation of a variable, considered the input, with minimal loss of mutual information with respect to another variable, considered the output. First, we introduce a split-and-merge algorithm based on the definition of an information channel between a set of regions (input) of the image and the intensity histogram bins (output). From this channel, the maximization of the mutual information gain is used to optimize the image partitioning. Then, the merging process of the regions obtained in the previous phase is carried out by minimizing the loss of mutual information. From the inversion of the above channel, we also present a new histogram clustering algorithm based on the minimization of the mutual information loss, where now the input variable represents the histogram bins and the output is given by the set of regions obtained from the above split-and-merge algorithm. Finally, we introduce two new clustering algorithms which show how the information bottleneck method can be applied to the registration channel obtained when two multimodal images are correctly aligned. Different experiments on 2-D and 3-D images show the behavior of the proposed algorithms

Constituintes fenólicos e terpenóides isolados das raízes de Andira fraxinifolia (Fabaceae)

Sitosterol, stigmasterol, betulinic acid, lupeol, 3-O-beta-D-glucopiranosylsitosterol, 3-O-alpha-L-rhamnopiranosylchromone, 5,7-dihydroxy-4'-methoxyisoflavone, 3',5,7-trihydroxy-4'-methoxyisoflavone and a mixture of two rel-2R,3S-3-O-alpha-L-rhamnopiranosilflavanonols were isolated from the roots of Andira fraxinifolia. Their structures were established by spectral data analysis.

Volatile constituents of the oils from Povedadaphne Quadriporata (lauraceae) from "Alberto M. Brenes" biological preserve, Costa Rica

The composition of the leaf, bark and wood oils of Povedadaphne quadriporata W. Burger from Costa Rica were analyzed by capillary GC/FID and GC/MS. One hundred and sixty-three compounds were identified. The major components from the leaf oil were a-pinene (21.2%), germacrene D (18.1%), b-pinene (14.8%), a-phellandrene (7.8%), a-copaene (6.6%), b-caryophyllene (6.1%) and d-cadinene (3.5%). From bark oil, the main constituents were a-pinene (27.7%), p-cymene (7.8%), b-pinene (7.4%), camphene (3.6%), a-copaene (3.5%) and limonene (3.3%). From wood oil, 1,10-di-epi-cubenol (8.0%), a-eudesmol (3.4%), cadalene (3.4%) and d-cadinene (3.0%) were the major compounds identified. This paper describes for the first time the composition of essential oils in this unique species and genus.

Composição química dos óleos essenciais das folhas de seis espécies do gênero Baccharis de "Campos de Altitude" da mata atlântica paulista

The essential oils from the leaves of six species of the Baccharis genus (B. dracunculifolia, B. microdonta, B. regnelli, B. schultzii, B. trimera, and B. uncinella), collected in the "Campos de Altitude" of the Atlantic Forest (SP), were extracted using hydrodistillation procedures and analyzed by GC and GC/MS. There was a predominance of sesquiterpenes in all studied oils as b-elemene in B. dracunculifolia and B. regnelli, a-humulene in B. trimera, g-gurjunene in B. schultzii, bicyclogermacrene in B. regnelli, d-cadinene in B. regnelli and B. uncinella, spathulenol in B. schultzii, caryophyllene oxide in B. microdonta and guaiol in B. uncinella. However, a high amount of monoterpenes was also observed in B. uncinella (a-pinene), B. regnelli (d-car-3-ene) and B. schultzii (limonene). The chemical compounds of the essential oils of B. schultzii, B. regnelli and B. microdonta are described for the first time in this work.

Saponinas triterpênicas das raízes de guettarda pohliana müll. Arg. (Rubiaceae)

The phytochemical investigation of Guettarda pohliana roots led to the isolation of 28-O-beta-D-glycopyranosyl-3-O-beta-D-quinovopyranosyl quinovic acid, 28-O-beta-D-glycopyranosyl-3-O-beta-D-glycopyranosyl quinovic acid, 3-O-beta-D-glycopyranosyl quinovic acid, 28-O-beta-D-glycopyranosyl-3-O-beta-D-glycopyranosyl cincholic acid along with quinovic acid, daucosterol and 4,5-O-dicaffeoyl quinic acid. The structures of the isolated compounds were assigned on the basis of spectroscopic data, including two-dimensional NMR methods. The antiradical activity of the crude methanolic extract and of its fractions was evaluated.

First secondary metabolites from Herissantia crispa L (Brizicky) and the toxicity activity against Artemia salina Leach

The phytochemical investigation of Herissantia crispa led to the isolation of seven compounds, identified as: sitosterol 3-O-β-D-glucopyranoside, stigmasterol 3-O-β-D-glucopyranoside, 3,5,7,4'-tetrahydroxyflavone (kaempferol), 3,5,7,3',4'-pentahydroxyflavone (quercetin), unpublished in the genus Herissantia, besides β-sitosterol, kaempferol 3-O-β-D-(6''-E-p-coumaroil) (tiliroside) glucopyranoside and kaempferol 3,7-di-O-α-L-ramnopyranoside (lespedin), described for the first time in the species. The structural determination of the compounds was made by means of spectroscopy methods such as Infrared Spectroscopy, ¹H and 13C Nuclear Magnetic Resonance, with the aid of two dimensional techniques, and by comparison with literature data. The toxicity activity of the MeOH extract and lespedin on Artemia salina Leach. was also carried out.

HPLC-DAD based method for the quantification of flavonoids in the hydroethanolic extract of Tonina fluviatilis Aubl. (Eriocaulaceae) and their radical scavenging activity

This article describes the isolation and identification of flavonoids in the hydroethanolic extract of the aerial parts from Tonina fluviatilis and evaluation of their antiradical activity. A method based on HPLC-DAD was developed and validated for detecting and quantifying flavonoids in hydroethanolic extracts. The flavonoids identified and quantified in the extract were 6,7-dimethoxyquercetin-3-O-β-D-glucopyranoside (1), 6-hydroxy-7-methoxyquercetin-3-O-β-D-glucopyranoside (2), and 6-methoxyquercetin-3-O-β-D-glucopyranoside (3). The developed method presented good validation parameters, showing that the results obtained are consistent and can be used in ensuring the quantification of these constituents in the extracts. Compounds 2 and 3 showed strong antiradical activity when compared with the positive controls (quercetin and gallic acid).

DI-HIDROCUCURBITACINA B: SEMI-SÍNTESE DE NOVOS DERIVADOS GLICOSILADOS

In the last ten years, the interest in natural and semi-synthetic cucurbitacin derivatives has increased, primarily due their cytotoxic and anti-tumoral activities. However, the isolation of glycosylated cucurbitacins has been difficult due the presence of β-glucosidase enzyme. With the aim of obtaining new glycosylated derivatives, the glycosylation of dihydrocucurbitacin B under Köenigs-Knorr and imidate reaction conditions was studied. Novel glycoside derivatives 16-(1,2-orthoacetate-3,4,6-tri-O-acetyl-α-D-glucopyranosyl)-dihydrocucurbitacin B (2), 2-O-β-D-2,3,4,6-tetra-O-acetyl-galactopyranosyl dihydrocucurbitacin B (3) and 2-O-β-D-galactopyranosyl dihydrocucurbitacin B (4) were synthesized for the first time in 17% (2 and 3) and 48% (4) yields.

NOVOS FLAVONOIDES DE Margaritopsis carrascoana COM ATIVIDADE ANTIOXIDANTE

EtOH extracts of the stems and leaves of Margaritopsis carrascoana were found to contain new flavonoids luteolin 7-O-{β-D-apiofuranosil-(1→6)-[β-Lrhamnopyranosyl-( 1→2)]-β-D-glucopyranosyl} (5) and luteolin 7-O-{α-L-rhamnopyranosyl-(1→6)-[β-L-rhamnopyranosyl- (1→2)]-β-D-glucopyranosyl} (6), in addition to the known dihydrodehydrodiconiferyl alcohol 4-O-b-D-glucopyranoside (1), luteolin 7-O-b-L-rhamnopyranosyl-(1→2)-β-D-glucopyranosyl (2), luteolin 7-O-[b-D-apiofuranosyl-(1→6)]-β-D-glucopyranoside (3), and chrysoeriol 7-O-[b-D-apiofuranosyl-(1→6)]-β-D-glucopyranoside (4). All isolated compounds presented higher antioxidant activities than the controls, BHT and quercetin, while the extract of the stems showed strong AChE inhibition.

Self-assembly of supermolecular species directed by hydrogen bonding and aromatic π-π stacking interactions

A new Cu(II) trimers, [Cu3(dcp)2(H2O)8]. 4DMF, with the ligand 3,5-pyrazoledicarboxylic acid monohydrate (H3dcp) has been prepared by solvent method. Its solid-state structure has been characterized by elemental analysis, thermal analysis (TGA and DSC), and single crystal X-ray diffraction. X-ray crystallographic studies reveal that this complex has extended 1-D,2-D and 3-D supramolecular architectures directed by weak interactions (hydrogen bond and aromatic π-π stacking interaction) leading to a sandwich solid-state structure.

FORMAÇÕES FLORESTAIS DE RESTINGA E RELAÇÕES ECOLÓGICAS COM LIANAS

Objetivou-se conhecer a composição florística das lianas em duas formações florestais do litoral amazônico paraense. O estudo foi realizado na APA Algodoal-Maiandeua, no Município de Maracanã, Pará, onde foram demarcadas duas parcelas de 50 x 50 m na floresta seca e duas parcelas na floresta inundável. Para análise da composição, riqueza e diversidade, foram identificadas e quantificadas todas as espécies, enquanto para verificar a diferença entre as comunidades de trepadeiras foram sorteadas aleatoriamente 80 árvores-suporte em cada formação florestal e utilizada uma análise de MDS. A diversidade foi verificada pelos índices de Shannon-Weaver (H’) e o inverso, pelo índice de Simpson (1/D). Nas duas formações foram registrados 177 indivíduos, em 15 famílias, 21 gêneros e 27 espécies. Dilleniaceae foi a família com o maior número de espécies e Smilax syphilitica Humb. & Bonpl. ex Willd. e Odontadenia nitida (Vahl) Müll. Arg., com o maior número de indivíduos na floresta seca e na floresta inundável, respectivamente. A análise de MDS não separou as florestas de acordo com a composição florística das lianas. A diversidade na floresta inundável foi de H’ = 1,08 e 1/D = 8,3 e na floresta seca, de H’ = 0,98 e 1/D = 7,2. As formações florestais analisadas não apresentaram diferenças significativas quanto à diversidade, riqueza e composição de lianas.

Pressão intra-abdominal em pacientes com trauma abdominal

OBJETIVOS: Pacientes com trauma abdominal tratados cirurgicamente são muito suscetíveis ao desenvolvimento de hipertensão intra-abdominal e síndrome do compartimento abdominal, cujo diagnóstico é baseado na medição da pressão intraabdominal associada a parâmetros clínicos. Este estudo teve por objetivos avaliar prospectivamente o comportamento da pressão intra-abdominal de pacientes com trauma abdominal cirurgicamente tratados e identificar se há relação entre tal comportamento e parâmetros clínicos destes pacientes. MÉTODO: A técnica de Kron foi utilizada para medir a pressão intra-abdominal. A casuística foi composta por 17 homens e três mulheres com média de idade de 36,9 anos (D.P. 12,943). O mecanismo de trauma mais freqüente foi contusão abdominal 12 (60%) contra oito (40%) pacientes com ferimentos penetrantes. Os dados foram coletados em 6 e 18 horas de pós-operatório. RESULTADOS: As médias de pressão intra-abdominal foram 10,4 cmH2O (D.P. 3,939) em 6 horas e 10,263 cmH2O (D.P. 3,445) em 18 horas de pós operatório. A análise dos resultados mostrou correlação estatisticamente significante entre o volume de colóides infundidos e a pressão intra-abdominal em 6 e 18 horas pós-operatórias (p = 0,0380 e p = 0,0033 respectivamente). É provável que tal correlação se deva ao edema visceral causado pelo extravasamento capilar de soluções, aumentando a pressão intra-abdominal. CONCLUSÕES: Os achados deste estudo ratificam a idéia de relação entre grandes volumes de infusão venosa, sobretudo colóides, e o aumento da pressão intra-abdominal e destacam a importância da avaliação da pressão intra-abdominal em pacientes com trauma abdominal submetidos a grandes reposições volêmicas, sobretudo as soluções coloidais.

Effect of exposure to sublethal concentrations of sodium cyanide on the carbohydrate metabolism of the Indian Major Carp Labeo rohita (Hamilton, 1822)

Experiments were designed to study in-vivo effects of sodium cyanide on biochemical endpoints in the freshwater fish Labeo rohita. Fish were exposed to two sublethal concentrations (0.106 and 0.064mg/L) for a period of 15 days. Levels of glycogen, pyruvate, lactate and the enzymatic activities of lactate dehydrogenase (LDH), succinate dehydrogenase (SDH), glucose-6-phosphate dehydrogenase (G6PDH), phosphorylase, alkaline phosphatase (ALP), acid phosphatase (AcP) were assessed in different tissues (liver, muscle and gills). Result indicated a steady decrease in glycogen, pyruvate, SDH, ALP and AcP activity with a concomitant increase in the lactate, phosphorylase, LDH and G6PD activity in all selected tissues. The alterations in all the above biochemical parameters were significantly (p<0.05) time and dose dependent. In all the above parameters, liver pointing out the intensity of cyanide intoxication compare to muscle and gills. Study revealed change in the metabolic energy by means of altered metabolic profile of the fish. Further, these observations indicated that even sublethal concentrations of sodium cyanide might not be fully devoid of deleterious influence on metabolism in L. rohita.

Monitoring and molecular characterization of group Drotavirus in Brazilian poultry farms

Abstract: Rotaviruses are etiological agents of diarrhea both in humans and in several animal species. Data on avian Group D rotaviruses (RVD) are scarce, especially in Brazil. We detected RVD in 4 pools of intestinal contents of broilers, layer and broiler breeders out of a total of 111 pools from 8 Brazilian states, representing an occurrence of 3.6%, by a specific RVD RT-PCR targeting the VP6 gene. Phylogenetic tree confirmed that the Brazilian strains belong to group D and 3 of the sequences were identical in terms of amino acid whereas one showed 99.5% identity with the others. The sequences described in this study are similar to other sequences previously detected in Brazil, confirming the conserved nature of the VP6 protein.

Sobressemeadura da soja como técnica para supressão da emergência de plantas daninhas

O objetivo deste trabalho foi avaliar a eficiência da sobressemeadura da soja, utilizando plantas de cobertura, na redução da emergência de plantas daninhas e seus reflexos na produtividade da cultura da soja cultivada na safra seguinte. O delineamento utilizado foi de blocos ao acaso, em esquema de parcelas subdivididas, com o fator época na parcela e o fator plantas de cobertura nas subparcelas, com quatro repetições. A soja foi semeada em quatro épocas: 1) 27/10/2005, 2) 10/11/2005, 3) 24/11/2005 e 4) 14/12/2005, em sistema de plantio direto, correspondendo a quatro épocas de sobressemeadura das plantas de cobertura, as quais ocorreram, respectivamente, em: a) 30/1/2006, b) 13/2/2006, c) 22/2/2006 e d) 14/3/2006. Foram avaliadas seis plantas de cobertura [Brachiaria brizantha, B. ruziziensis, B. decumbens, Eleusine coracana, Pennisetum glaucum e Cober Crop - híbrido de sorgo (Sorghum bicolor cv. Bicolor) com capim-sudão (Sorghum bicolor cv. Sudanense)] e pousio (vegetação espontânea) em quatro épocas de sobressemeadura, a qual foi realizada manualmente, a lanço, quando a soja atingiu o estádio R7 (início da desfolha na maturação fisiológica), em cada uma das quatro épocas de semeadura da soja na safra 2005/06. Em 23/10/2006, executou-se a primeira dessecação das plantas de cobertura. Após 20 dias, aplicou-se a segunda dessecação e, em seguida, fez-se a semeadura da soja, cultivar MSOY 6101, de ciclo precoce, no espaçamento de 0,45 m, visando à população de 500.000 plantas ha-1. A técnica de sobressemeadura à cultura da soja, principalmente com a utilização de braquiárias, mostrou ser importante ferramenta para o manejo integrado de plantas daninhas, por proporcionar maior aporte de fitomassa e cobertura do solo, o que contribui para sustentabilidade ao sistema de plantio direto no cerrado.