Cloning, characterization, and expression analysis of extracellular copper/zinc superoxide dismutase gene from bay scallop Argopecten irradians

Extracellular superoxide dismutase (ECSOD) is a major extracellular antioxidant enzyme that protects organs from damage by reactive oxygen species (ROS). We cloned a novel ECSOD from the bay scallop Argopecten irradians (AiECSOD) by 3' and 5' RACE. The full-length cDNA of AiECSOD was 893 bp with a 657 bp open reading frame encoding 218 amino acids. The deduced amino acid sequence contained a putative signal peptide of 20 amino acids, and sequence comparison showed that AiECSOD had low degree of homology to ECSODs of other organisms. The genomic length of the AiECSOD gene was about 5276 bp containing five exons and six introns. The promoter region contained many putative transcription factor binding sites such as c-Myb, Oct-1, Sp1, Kruppel-like, c-ETS, NF kappa B, GATA-1, AP-1, and Ubx binding sites. Furthermore, tissue-specific expressions of AiECSOD and temporal expressions of AiECSOD in haemocytes of bay scallops challenged with bacteria Vibrio anguillarum were quantified using qRT-PCR. High levels of expression were detected in haemocytes, but not in gonad and mantle. The expression of AiECSOD reached the highest level at 12 h post-injection with V. anguillarum and then returned to normal between 24 h and 48 h post-injection. These results indicated that AiECSOD was an inducible protein and that it may play an important role in the immune responses against V anguillarum. Crown Copyright (C) 2008 Published by Elsevier Ltd. All rights reserved.

北极Gakkel超慢速扩张脊大洋橄榄岩的地球化学特征及其意义

Gakkel Ridge in Arctic Ocean is the ulstraslow spreading ridge in the world with a full spreading rate decreasing from 14 mm/yr in the western end to 7mm/yr in the eastern end. To study the histories of partial melting and melt referilization occurred in the oceanic mantle beneath Gakkel Ridge, both extremely fresh and altered abyssal peridotites from two dredge hauls (PS66-238 and HLY0102-D70) have been selected in this research. Major and trace element data of the residual minerals suggest that all samples have been refertilized by late enriched melts after low to moderate degrees (3-12%) of partial melting in the stability field of spinel, whereas some samples also inherited signatures of partial melting in stability field of garnet. Os isotopic compositions of Gakkel samples have not been significantly affected by late processes, e.g., seawater alteration and melt refertilzaiton. Samples from both dredge hauls have similar range of 187Os/188Os, from strongly unradiogenic (~0.114) in the harzburgites to approximating the inferred values of PUM (primitive upper mantle) in some lherzolites (~0.129). Inherited ancient depletion events in the harzburgites with Re-depletion age up to 2 billion years are unrelevant to the recent genesis of MORB (mid-ocean ridge basalts) beneath Gakkel Ridge. Comparisons of highly siderophile elements (HSEs) between the fresh and altered samples suggested both Pd and Re were affected and thus are mobile during seawater alteration, whereas the other HSEs (i.e., Os, Ir, Ru an Pt) are stable. The fractionated HSEs patterns in the harzburgites suggest both PPGEs (Pt and Pd) and Re can be fractionated from IPGEs (Os, Ir and Ru) at low degree of partial melting, which might be due to physical dredging of sulfide melts by silicate melts rather than equilibrium partitioning between residues and silicate melts. Inferred HSEs budget of the PUM confirm the previous study that both Ru/Ir and Pd/Ir are suprachondritic in the PUM. Some modifications of late-veneer hypothesis are required in light of the unique PUM composition. HSEs and Os isotopic compositions of Gakkel abyssal peridotites indicate the oceanic mantle is highly heterogeneous within a scale of one dredge haul (<5 km). Both depleted and fertile mantle domains are likely to be mechanically juxtaposed in the asthenosphere in a state of ‘plum pudding’. Widely distribution of ancient depleted components in the asthenosphere suggests that DMM (depleted MORB mantle) should not be synonymous with the MORB source. The later is just the fertile part of the former, i.e., the depleted components in the DMM do not or contribute little to the genesis of MORB.

西秦岭新生代火山岩中的地幔捕虏体和捕虏晶研究

Western Qinling, a conjunction region of the North China Craton, the Yangtze Craton and the Tibetan Plateau, has very complicated history of geologic and tectonic evolution. Previous studies mainly focus on tectonics and petrology of volcanic rocks in the western Qinling. Therefore, little is known about the Cenozoic lithospheric mantle beneath the western Qinling. Mafic, ultramafic and/or alkaline volcanic rocks and their entrained mantle peridotitic xenoliths and xenocrysts are known as samples directly from the lithospheric mantle. Their petrological and geochemical characteristics can reflect the nature and deep processes of the lithospheric mantle. Cenozoic volcanic rocks in the western Qinling contain abundant mantle xenoliths and xenocrysts, which provide us an opportunity to probe the lithospheric mantle beneath this region and a new dimension to insight into geologic evolution. Cenozoic volcanic rocks (7-23 Ma) from the western Qinling are sparsely distributed in the Lixian-Dangchang-Xihe Counties, Gansu Province, China. Volcanic rocks contain plenty of mantle-derived xenoliths, including spinel lherzolites with subordinate wehrlite, dunite, olivine websterite, clinopyroxenite and garnet lherzolite, and few olivine, clinopyroxene and spinel xenocrysts. These peridotitic xenoliths show clear deformed textures and their major minerals show excellent orientation. Thus, these peridotites are typical deformed peridotites. Olivine xenocrysts have clearly-zoned textures. The peridotitic xenoliths can be divided into two groups based on their compositions, namely, the H-type and L-type. The H-type peridotites are characterized by high Fo (>90) in olivines in which fine-grained ones have higher Fo than the coarse grains, low CaO (<20 %) in clinopyroxenes, high Cr# (>40) in spinels and high equilibration temperatures. They may represent the refractory lithospheric mantle. In contrast, the L-type peridotites contain low Fo (<90) olivines (with lower Fo in fine-grained olivines), high CaO (>20 %) clinopyroxenes, low Cr# (<20) spinels and low equilibration temperatures. They experienced low degree of partial melting. The Cenozoic lithospheric mantle beneath the western Qinling was refractory in major element compositions based on the mineral compositions of xenoliths and xenocrysts and experienced complicated deep processes. The lithospheric mantle was modified by shear deformation due to the diapirism of asthenosphere and strong tectonic movements including the collision between North China Craton and Yangze Craton and the uplift of Tibetan Plateau, and then underwent metasomatism with a hydrous, Na, Ti and Cr enriched melt.

矾山杂岩体成因及其与磷（铁）矿的成矿关系

The Fanshan complex consists of layered potassic ultramafic-syenite intrusions. The Fanshan apatite (-magnetite) deposit occurs in the Fanshan complex, and is an important style of phosphorus deposit in China. The Fanshan complex consists of three (First- to Third-) Phases of intrusion, and then the dikes. The First-Phase Intrusive contains ten typical layered rocks: clinopyroxenite, biotite clinopyroxenite, coarse-grained biotite clinopyroxenite, pegmatitic orthoclase-biotite clinopyroxenite, variegated orthoclase clinopyroxenite, interstitial orthoclase clinopyroxenite, biotite rock, biotite-apatite rock, biotite rock and magnetite-apatite rock. This layered intrusive consists of nine rhythmic units. Each rhythmic unit essentially comprises a pair of layers: clinopyroxenite at the bottom and biotite clinopyroxenite at the top. The apatite (-magnetite) deposit is situated near the top of rhythmic Unit no. 6 of the First-Phase Intrusive. The Second-Phase Intrusive contains three typical rocks: coarse-grained orthoclase clinopyroxenite, . coarse-grained salite syenite and schorlomite-salite syenite. The Third-Phase Intrusive includes pseudo-trachytic salite syenite, porphyritic augite syenite, fine-grained orthoclase clinopyroxenite and fine-grained salite syenite. The origin of the Fanshan complex is always paid attention to it in China. Because most layered igneous intrusion in the world not only have important deposit in it, but also carry many useful information for studying the formation of the intrusion and the evolvement of magma. Two sketch maps were drawn through orebodies along no. 25 cross-cut on 425 mL and no. 1 cross-cut on 491 mL in the Fanshan mine. Through this mapping, a small-scaled rhythmic layering (called sub-rhythmic layering in the present study) was newly found at the top of the rhythmic Unit no. 6. The concept of sub-rhythmic layering is defined in this article. The sub-rhythmic layering is recognized throughout this apatite-rich part, except for magnetite-apatite rock. Presence of the layered magnetite-apatite rock is one of the characteristics of the Fanshan apatite (-magnetite) deposit. Thus, from this layer downwards six units of sub-rhythmic layering are recognized in the present study. Each unit consists of biotite clinopyroxenite (or biotite rock and biotite-apatite rock) layer at the bottom and apatite rock layer at the top. To study this feature in detail is an important work for understanding the origin of the Fanshan complex and apatite (-magnetite) deposit. The origin of the Fanshan complex and the relation of the formation of the apatite(-magnetite)deposit will be interpreted by the study of sub-rhythmic layering on the basis of previous research works. The magma formed the Fanshan complex was rich in K2O, early crystallized pyroxene, and after this phase more biotite crystallized, but no amphibole appeared. This indicated that the activity of H2O in the magma was low. Major element compositions of biotite and clinopyroxene (on thin sections) in the sub-rhythmic layering were analyzed using electron microprobe analyzer. The analytical results indicate Mg/(Mg+Fe*+Mn) atomic ratios (Fe*, total iron) of these two minerals rhythmically changed in sub-rhythmic layering. The trends of Mg/(Mg+Fe*+Mn) atomic ratio (Fe*, total iron) of biotite and clinopyroxene indicate that the magma evolved markedly from relatively magnesian bottom layer to less magnesian top layer in each sub-rhythmic unit. A general trend through the sub-rhythmic layering sequence is both minerals becoming relatively magnesian upwards. The formation temperatures for sub-rhythmic layering yield values between 600 and 800 ℃, were calculated using the ratio of Mg/(Mg+Fe+Mn) in the salite and biotite assemblage. The equilibrium pressures in the rhythmic layers calculated using the contents of Al in the salite were plotted in the section map, shown a concave curve. This indicates that the magma formed the First-Phase Intrusive crystallized by two vis-a-vis ways, from its bottom and top to its centre, and the magnetite-apatite rock was crytallized in the latest stage. The values of equilibrium pressures in the sub-rhythmic layering were 3.6-6.8(xlO8) Pa with calculated using the contents of Al in the salite. The characteristics of geochemistry in various intrusive rocks and the rocks or apatite of sub-rhythmic layers indicated that the Fanshan complex formed by the comagmatic crystallization. The contents of immiscible elements and REEs of apatite rock at the top of one sub-rhythmic unit are more than biotite clinopyroxenite at the bottom. The contents of immiscible elements and REEs of apatite of biotite clinopyroxenite at the bottom of one sub-rhythmic unit are higher than apatite rock at the top. The curves of rocks (or apatite) in the upper sub-rhythmic units are between two curves of the below sub-rhythmic unit in the primitive mantle-normalized trace element abundance spider diagram and the primitive mantle-normalized REE pattern. The trend for the contents of immiscible elements and REEs inclines to the same contents from the bottom to the top in sub-rhythmic layering. These characteristics of geochemistry of rocks or apatites from sub-rhythmic layering indicate that the latter sub-rhythmic unit was produced by the residual magma after crystallization of the previous sub-rhythmic unit. The characteristics of petrology, petrochemistry, geochemistry in the Fanshan complex and sub-rhythmic layers and the trends of Mg/(Mg+Fe+Mn) atomic ratio of biotite and clinopyroxene in sub-rhytmic layering rejected the hypotheses, such as magma immiscibility, ravitational settling and multiple and pulse supplement of magma. The hypothesis of differentiation by crystallization lacks of evidences of field and excludes by this study. On the base of the trends of formation temperatures and pressures, the characteristics of petrology, petrochemistry, geochemistry for the Fanshan complex and the characteristics of geochemistry for the rocks (or apatites), the trends of Mg/(Mg+Fe+Mn) atomic ratio of biotite and clinopyroxene in sub-rhytmic layering, and the data of oxygen, hydrogen, strontium and neodymium isotopes, this study suggests that the magma formed the Fanshan complex was formed by low degree partial melting of mantle at a low activity of H2O, and went through the differentiation at the depth of mantle, then multiply intruded and crystallized. The rhythmic layers of the First-Phase Intrusive formed by the magma fractional crystallized in two vis-a-vis ways, from the bottom and top to the centre in-situ fractional crystallization. The apatite (-magnetite) deposit of the Fanshan complex occurs in sub-rhythmic layering sequence. The the origin of the sub-rhythmic layering is substantially the origin of the Fanshan apatite (-magnetite) deposit. The magma formed the rhythmic layers of First-Phase Intrusive was rich in H2O, F and P at the later stage of its in-situ fractional crystallization. The Fanshan apatite (-magnetite) deposit was formed by this residual magma in-situ fractional crystallization. The magnetite-apatite rock was crystallized by two vis-a-vis ways at the latest stage in-situ fractional crystallization in the rhythmic layers. The result was light apatite layer below heavy the magnetite-apatite layer, formed an "inversion" phenomenon.

Deciding Isomorphisms of Simple Types in Polynomial Time

The isomorphisms holding in all models of the simply typed lambda calculus with surjective and terminal objects are well studied - these models are exactly the Cartesian closed categories. Isomorphism of two simple types in such a model is decidable by reduction to a normal form and comparison under a finite number of permutations (Bruce, Di Cosmo, and Longo 1992). Unfortunately, these normal forms may be exponentially larger than the original types so this construction decides isomorphism in exponential time. We show how using space-sharing/hash-consing techniques and memoization can be used to decide isomorphism in practical polynomial time (low degree, small hidden constant). Other researchers have investigated simple type isomorphism in relation to, among other potential applications, type-based retrieval of software modules from libraries and automatic generation of bridge code for multi-language systems. Our result makes such potential applications practically feasible.

Safe Compositional Specification of Networking Systems: A Compositional Analysis Approach

We present a type inference algorithm, in the style of compositional analysis, for the language TRAFFIC—a specification language for flow composition applications proposed in [2]—and prove that this algorithm is correct: the typings it infers are principal typings, and the typings agree with syntax-directed type checking on closed flow specifications. This algorithm is capable of verifying partial flow specifications, which is a significant improvement over syntax-directed type checking algorithm presented in [3]. We also show that this algorithm runs efficiently, i.e., in low-degree polynomial time.

Edge-preserving self-healing: Keeping network backbones densely connected

Healing algorithms play a crucial part in distributed peer-to-peer networks where failures occur continuously and frequently. Whereas there are approaches for robustness that rely largely on built-in redundancy, we adopt a responsive approach that is more akin to that of biological networks e.g. the brain. The general goal of self-healing distributed graphs is to maintain certain network properties while recovering from failure quickly and making bounded alterations locally. Several self-healing algorithms have been suggested in the recent literature [IPDPS'08, PODC'08, PODC'09, PODC'11]; they heal various network properties while fulfilling competing requirements such as having low degree increase while maintaining connectivity, expansion and low stretch of the network. In this work, we augment the previous algorithms by adding the notion of edge-preserving self-healing which requires the healing algorithm to not delete any edges originally present or adversarialy inserted. This reflects the cost of adding additional edges but more importantly it immediately follows that edge preservation helps maintain any subgraph induced property that is monotonic, in particular important properties such as graph and subgraph densities. Density is an important network property and in certain distributed networks, maintaining it preserves high connectivity among certain subgraphs and backbones. We introduce a general model of self-healing, and introduce xheal+, an edge-preserving version of xheal[PODC'11]. © 2012 IEEE.

Matéria húmica de sapal: variações estruturais e complexação com o cobre

No presente trabalho foram estudadas as variações na composição, estrutura e comportamento das substâncias húmicas sedimentares (SHS), promovidas pela presença de duas espécies de plantas da família Chenopodiacea, presentes nos sapais da Ria de Aveiro: a Halimione portulacoides e a Arthrocnemum fruticosum. Para além das variações espaciais horizontais, foram investigadas as variações ao longo de um perfil de profundidades. Desta forma, para além da camada superficial (0-10 cm) de sedimentos com diferentes espécies de plantas e sem plantas, também foram investigadas camadas de sedimentos intermédia (20-25 cm) e profunda (45-50 cm). Para a extracção das SHS recorreu-se a uma pequena modificação do método proposto pela International Humic Substances Society (IHSS) para extracção e purificação de substâncias húmicas de solos. As SH extraídas foram caracterizadas através dos métodos espectroscópicos de absorção no ultravioleta visível, de fluorescência molecular síncrona, de absorção no infravermelho com transformadas de Fourier (FTIR) e de RMN 13C em estado sólido. Estas técnicas de caracterização foram complementadas pela análise elementar e termogravimetria. Em algumas amostras, foram ainda determinados o conteúdo em alguns metais por ICP-AES e o conteúdo funcional ácido por titulações potenciométricas. Após exaustiva caracterização das amostras de AH, procedeu-se ao estudo da sua capacidade de complexação com o cobre, recorrendo a titulações monitorizadas por fluorescência molecular síncrona. Os resultados revelaram que a colonização de sedimentos por plantas vasculares superiores conduz a uma alteração profunda no ambiente sedimentar e que esta é reflectida na diagénese das substâncias húmicas sedimentares, tendo-se observado variações a uma pequena escala espacial. O estudo deste tipo de variações nunca tinha sido efectuado em trabalhos anteriores. Nos ácidos fúlvicos detectaram-se diferenças na composição e estrutura das amostras correspondentes às camadas superiores de sedimentos, reflectindo a presença de diferentes colonizações vegetais. Relativamente aos ácidos húmicos, foi possível classificá-los em dois tipos distintos. Os AH do tipo I correspondem aos sedimentos superficiais e intermédios dos locais com plantas. Neste tipo de AH verificou-se uma incorporação de polissacarídeos e estruturas peptídicas, em estados de humificação pouco desenvolvidos. Os AH do tipo II correspondem aos sedimentos mais profundos de todos os locais e aos intermédios do local sem plantas e caracterizam-se por um maior grau de humificação e polimerização, um maior conteúdo aromático e de estruturas conjugadas e um maior conteúdo de grupos carboxílicos. Essas diferenças estruturais conduzem a diferentes comportamentos ácido/base e de complexação com o cobre. Assim, os AH do tipo I, que apresentam sinais espectroscópicos mais baixos associados a grupos carboxílicos e fenólicos, têm menor conteúdo de grupos funcionais ácidos e menor capacidade de complexação com o cobre quando se consideram ligandos característicos de unidades aromáticas conjugadas. Relativamente aos valores de log K dos complexos de AHS com o cobre, as amostras representativas da camada superficial dos sedimentos com plantas apresentaram valores superiores aos das restantes amostras de AH estudadas, cujos valores de log K são similares entre si. Atendendo aos resultados de análise elementar e espectroscópica, este facto pode estar associado à presença de compostos de azoto não peptídicos. Quanto a outros ligandos para o cobre, nomeadamente os representativos de estruturas peptídicas contendo o aminoácido triptofano e estruturas aromáticas simples, não foi possível obter resultados conclusivos. Dado que os ácidos húmicos do tipo I demonstraram um maior conteúdo peptídico e menor conteúdo aromático, o estudo destes ligandos torna-se importante para compreender melhor o efeito da presença de plantas nos sedimentos de sapal sobre o comportamento dos ácidos húmicos sedimentares como ligandos para o cobre. Refere-se ainda que foram detectadas certas especificidades na variação das características do sedimento e das substâncias húmicas com a profundidade nos diferentes locais estudados que não podem ser explicadas meramente com a presença de material vegetal oriundo de diferentes espécies de plantas, requerendo um conhecimento mais aprofundado das comunidades bentónicas e do ambiente físico-químico do sedimento.

Primary production in systems subject to natural and anthropogenic eutrophication

Tese dout., Química, Universidade do Algarve, 2005

Development and standardization of a protocol for sperm cryopreservation of two important commercial oyster species

Dissertação de mestrado, Aquacultura e Pescas, Faculdade de Ciências e Tecnologia, Universidade do Algarve, 2015

Aprendizagens em contexto de formação inicial : um estudo com futuros professores de ciências em Cabo Verde

Tese de mestrado, Educação (Didáctica das Ciências), Universidade de Lisboa, Instituto de Educação, 2010

Task assignment algorithms for two-type heterogeneous multiprocessors

Consider the problem of assigning implicit-deadline sporadic tasks on a heterogeneous multiprocessor platform comprising two different types of processors—such a platform is referred to as two-type platform. We present two low degree polynomial time-complexity algorithms, SA and SA-P, each providing the following guarantee. For a given two-type platform and a task set, if there exists a task assignment such that tasks can be scheduled to meet deadlines by allowing them to migrate only between processors of the same type (intra-migrative), then (i) using SA, it is guaranteed to find such an assignment where the same restriction on task migration applies but given a platform in which processors are 1+α/2 times faster and (ii) SA-P succeeds in finding a task assignment where tasks are not allowed to migrate between processors (non-migrative) but given a platform in which processors are 1+α times faster. The parameter 0<α≤1 is a property of the task set; it is the maximum of all the task utilizations that are no greater than 1. We evaluate average-case performance of both the algorithms by generating task sets randomly and measuring how much faster processors the algorithms need (which is upper bounded by 1+α/2 for SA and 1+α for SA-P) in order to output a feasible task assignment (intra-migrative for SA and non-migrative for SA-P). In our evaluations, for the vast majority of task sets, these algorithms require significantly smaller processor speedup than indicated by their theoretical bounds. Finally, we consider a special case where no task utilization in the given task set can exceed one and for this case, we (re-)prove the performance guarantees of SA and SA-P. We show, for both of the algorithms, that changing the adversary from intra-migrative to a more powerful one, namely fully-migrative, in which tasks can migrate between processors of any type, does not deteriorate the performance guarantees. For this special case, we compare the average-case performance of SA-P and a state-of-the-art algorithm by generating task sets randomly. In our evaluations, SA-P outperforms the state-of-the-art by requiring much smaller processor speedup and by running orders of magnitude faster.

Geochemistry and petrogenesis of the McElroy and Larder Lake assemblages, Abitibi Greenstone Belt, Northeastern Ontario

The McElroy and Larder Lake assemblages, located in the southern Abitibi Greenstone Belt are two late Archean metavolcanic sequences having markedly contrasting physical characteristics arid are separated from one another by a regional fault. An assemblage is an informal term which describes stratified volcanic and/or sedimentary rock units built during a specific time period in a similar depositional or volcanic setting and are commonly bounded by faults, unconformities or intrusions. The petrology and petrogenesis of these assemblages have been investigated to determine if a genetic link exists between the two adjacent assemblages. The McElroy assemblage is homoclinal sequence of evolved massive and pillowed fl.ows, which except for the basal unit represents a progressively fractionated volcanic pile. From the base to the top of the assemblage the lithologies include Fe-tholeiitic, dendritic flows; komatiite basaltic, ultramafic flows; Mg-tholeiitic, leucogabbro; Mg-tholeiitic, massive flows and Fe-tholeiitic, pillowed flows. Massive flows range from coarse grained to aphanitic and are commonly plagioclase glomerophyric. The Larder Lake assemblage consists of komatiitic, Mg-rich and Fe-rich tholeiitic basalts, structurally disrupted by folds and faults. Tholeiitic rocks in the Larder Lake assemblage range from aphanitic to coarse grained massive and pillowed flows. Komatiitic flows contain both spinifex and massive textures. Geochemical variability within both assemblages is attributed to different petrogenetic histories. The lithologies of the McElroy assemblage were derived by partial melting of a primitive mantle source followed by various degrees of crystal fractionation. Partial melting of a primitive mantle source generated the ultramafic flows and possibly other flows in the assemblage. Fractionation of ultramafic flows may have also produced the more evolved McElroy lithologies. The highly evolved, basal, dendritic flow may represent the upper unit 3 of a missing volcanic pile in which continued magmatism generated the remaining McElroy lithologies. Alternatively, the dendritic flows may represent a primary lava derived from a low degree (10-15%) partial melt of a primitive mantle source which was followed by continued partial melting to generate the ultramafic flows. The Larder Lake lithologies were derived by partial melting of a komatiitic source followed by gabbroic fractionation. The tectonic environment for both assemblages is interpreted to be an oceanic arc setting. The McElroy assemblage lavas were generated in a mature back arc setting whereas the Larder Lake lithologies were produced during the early stages of komatiitc crust subduction. This setting is consistent with previous models involving plate tectonic processes for the generation of other metavolcanic assemblages in the Abitibi Greenstone Belt.

Essays in theoretical and applied macroeconomics

Cette thèse s’articule autour de trois chapitres indépendants qui s’inscrivent dans les champs de la macroéconomie, de l’économie monétaire et de la finance internationale. Dans le premier chapitre, je construis un modèle néo-keynesien d’équilibre général sous incertitude pour examiner les implications de la production domestique des ménages pour la politique monétaire. Le modèle proposé permet de reconcilier deux faits empiriques majeurs: la forte sensibilité du produit intérieur brut aux chocs monétaires (obtenue à partir des modèles VAR), et le faible degré de rigidité nominale observé dans les micro-données. Le deuxième chapitre étudie le role de la transformation structurelle (réallocation de la main d’oeuvre entre secteurs) sur la volatilité de la production aggregée dans un panel de pays. Le troisième chapitre quant à lui met en exergue l’importance de la cartographie des échanges commerciaux pour le choix entre un régime de change fixe et l’arrimage à un panier de devises. "Household Production, Services and Monetary Policy" (Chapitre 1) part de l’observation selon laquelle les ménages peuvent produire à domicile des substituts aux services marchands, contrairement aux biens non durables qu’ils acquièrent presque exclusivement sur le marché. Dans ce contexte, ils procèdent à d’importants arbitrages entre produire les services à domicile ou les acquerir sur le marché, dépendamment des changements dans leur revenu. Pour examiner les implications de tels arbitrages (qui s’avèrent être importants dans les micro-données) le secteur domestique est introduit dans un modèle néo-keyenesien d’équilibre général sous incertitude à deux secteurs (le secteur des biens non durables et le secteur des services) autrement standard. Je montre que les firmes du secteur des services sont moins enclin à changer leurs prix du fait que les ménages ont l’option de produire soit même des services substituts. Ceci se traduit par la présence d’un terme endogène supplémentaire qui déplace la courbe de Phillips dans ce secteur. Ce terme croit avec le degré de substituabilité qui existe entre les services produits à domicile et ceux acquis sur le marché. Cet accroissement de la rigidité nominale amplifie la sensibilité de la production réelle aux chocs monétaires, notamment dans le secteur des services, ce qui est compatible avec l’évidence VAR selon laquelle les services de consommation sont plus sensibles aux variations de taux d’intérêt que les biens non durables. "Structural Transformation and the Volatility of Aggregate Output: A Cross-country Analysis" (Chapitre 2) est basée sur l’évidence empirique d’une relation négative entre la part de la main d’oeuvre allouée au secteur des services et la volatilité de la production aggrégée, même lorsque je contrôle pour les facteurs tels que le développement du secteur financier. Ce resultat aggregé est la conséquence des développements sectoriels: la productivité de la main d’oeuvre est beaucoup plus volatile dans l’agriculture et les industries manufacturières que dans les services. La production aggregée deviendrait donc mécaniquement moins volatile au fur et à mesure que la main d’oeuvre se déplace de l’agriculture et de la manufacture vers les services. Pour évaluer cette hypothèse, je calibre un modèle de transformation structurelle à l’économie américaine, que j’utilise ensuite pour générer l’allocation sectorielle de la main d’oeuvre dans l’agriculture, l’industrie et les services pour les autres pays de l’OCDE. Dans une analyse contre-factuelle, le modèle est utlisé pour restreindre la mobilité de la main d’oeuvre entre secteurs de façon endogène. Les calculs montrent alors que le déplacement de la main d’oeuvre vers le secteur des services réduit en effet la volatilité de la production aggregée. "Exchange Rate Volatility under Alternative Peg Regimes: Do Trade Patterns Matter?" (Chapitre 3) est une contribution à la litterature économique qui s’interesse au choix entre divers regimes de change. J’utilise les données mensuelles de taux de change bilatéraux et de commerce extérieur entre 1980 et 2010 pour les pays membre de l’Union Economique et Monétaire Ouest Africaine (UEMOA). La monnaie de ces pays (le franc CFA) est arrimée au franc Francais depuis le milieu des années 40 et à l’euro depuis son introduction en 1999. Au moment de l’arrimage initial, la France était le principal partenaire commercial des pays de l’UEMOA. Depuis lors, et plus encore au cours des dix dernières années, la cartographie des échanges de l’union a significativement changé en faveur des pays du groupe des BICs, notamment la Chine. Je montre dans ce chapitre que l’arrimage à un panier de devises aurait induit une volatilité moins pronnoncée du taux de change effectif nominal du franc CFA au cours de la décennie écoulée, comparé à la parité fixe actuelle. Ce chapitre, cependant, n’aborde pas la question de taux de change optimal pour les pays de l’UEMOA, un aspect qui serait intéressant pour une recherche future.

Développement d’une approche de régulation des essais cliniques dans un contexte de pays en développement : le cas du Mali

Le Mali est devenu un milieu attractif pour les essais cliniques. Cependant, le cadre de réglementation pour leur surveillance y est très limité. Le pays manque de l’expertise, de l’infrastructure et des ressources nécessaires pour mettre en œuvre pleinement la régulation. Ceci représente un risque pour la sécurité des sujets de recherche et l’intégrité des résultats scientifiques. Il ne permet pas non plus de s’aligner sur les normes internationales en vigueur, telles que la déclaration d’Helsinki, les directives éthiques internationales du Conseil des organisations internationales des sciences médicales (CIOMS) ou les réglementations de pays industrialisés comme les États-Unis, le Canada ou l’Union Européenne. Pour améliorer la situation, la présente étude vise à comprendre les enjeux de la régulation des essais cliniques au Mali afin de suggérer des pistes de solutions et des recommandations. L’étude a été réalisée à l’aide de méthodes qualitatives, soit l’examen de documents officiels et des entrevues semi-dirigées avec les principaux acteurs impliqués dans les essais cliniques. La théorie néo-institutionnelle a servi de toile de fond à l’analyse des données. L’approche néo-institutionnelle consiste à expliquer l’influence de l’environnement sur les organisations. Selon cette approche, l’environnement s’assimile à des champs organisationnels incluant les connexions locales ou non, les liens horizontaux et verticaux, les influences culturelles et politiques ainsi que les échanges techniques. Les résultats présentés dans un premier article montrent l’existence de nombreux enjeux reflétant la carence du système de régulation au Mali. La coexistence de quatre scénarios d’approbation des essais cliniques illustre bien l’inconsistance des mécanismes. Tout comme l’absence d’inspection, l’inconsistance des mécanismes traduit également l’intervention limitée des pouvoirs publics dans la surveillance réglementaire. Ces enjeux résultent d’une double influence subie par les autorités réglementaires et les comités d’éthique. Ceux-ci sont, d’une part, influencés par l’environnement institutionnel sous pressions réglementaires, cognitives et normatives. D’autre part, les pouvoirs publics subissent l’influence des chercheurs qui opèrent comme des entrepreneurs institutionnels en occupant un rôle central dans le champ de la régulation. Dans un second article, l’étude propose une analyse détaillée des facteurs influençant la régulation des essais cliniques. Ces facteurs sont synthétisés en cinq groupes répartis entre deux sphères d’influence. L’analyse montre combien ces facteurs influencent négativement la régulation, notamment : 1) la structuration inachevée du champ de régulation due à un faible degré d’interactions, une absence de structure de coordination, d’informations mutuelles et de conscience dans la constitution des interdépendances; et 2) les positions relatives des acteurs impliqués dans la construction du champ de régulation se manifestant par une faible autorité des pouvoirs publics et l’ascendance des groupes de recherche. Enfin, dans un troisième article nous proposons quelques mécanismes qui, s’ils sont mis en œuvre, pourraient améliorer la régulation des essais cliniques au Mali. Ces mécanismes sont présentés, en référence au cadre théorique, sous trois types de vecteurs d’influence, notamment réglementaires, normatifs et cognitifs-culturels. En guise de conclusion, l’étude envoie un signal fort pour la nécessité d’une régulation appropriée des essais cliniques au Mali. Elle montre que la plupart des problèmes de fond en matière de régulation relèvent d’un besoin de restructuration du champ organisationnel et de renforcement de la position des pouvoirs publics.