CYP3A5 and ABCB1 genes influence blood pressure and response to treatment, and their effect is modified by salt.

The permeability-glycoprotein efflux-transporter encoded by the multidrug resistance 1 (ABCB1) gene and the cytochromes P450 3A4/5 encoded by the CYP3A4/5 genes are known to interact in the transport and metabolism of many drugs. Recent data have shown that the CYP3A5 genotypes influence blood pressure and that permeability-glycoprotein activity might influence the activity of the renin-angiotensin system. Hence, these 2 genes may contribute to blood pressure regulation in humans. We analyzed the association of variants of the ABCB1 and CYP3A5 genes with ambulatory blood pressure, plasma renin activity, plasma aldosterone, endogenous lithium clearance, and blood pressure response to treatment in 72 families (373 individuals; 55% women; mean age: 46 years) of East African descent. The ABCB1 and CYP3A5 genes interact with urinary sodium excretion in their effect on ambulatory blood pressure (daytime systolic: P=0.05; nighttime systolic and diastolic: P<0.01), suggesting a gene-gene-environment interaction. The combined action of these genes is also associated with postproximal tubular sodium reabsorption, plasma renin activity, plasma aldosterone, and with an altered blood pressure response to the angiotensin-converting enzyme inhibitor lisinopril (P<0.05). This is the first reported association of the ABCB1 gene with blood pressure in humans and demonstration that genes encoding for proteins metabolizing and transporting drugs and endogenous substrates contribute to blood pressure regulation.

Cancers du sein chez l'homme: quatre cas avec différenciation neuroendocrine.

Introduction: Les cancers du sein (CS) chez l'homme sont rares (1% des CS) et relativement mal connus. La répartition des types histologiques diffère dans ce groupe par rapport aux CS de la femme. Objectif: Nous rapportons quatre cas de carcinomes mammaires invasifs à différenciation neuroendocrine diagnostiqués chez des patients de sexe masculin de 1992 à 2012. Cas: Les patients étaient âgés de 80, 77, 59 et 56 ans. La tumeur s'est révélée par une masse palpable (2 cas) ou une douleur (2 cas). Le geste chirurgical a été une tumorectomie chez un patient, une mastectomie chez 3 patients (un an après le diagnostic pour l'un d'entre eux). Ces quatre CS correspondaient à des carcinomes invasifs de grade 1 ou 2 selon Elston et Ellis, avec composante de carcinome papillaire solide dans 2 cas, hormonosensibles, de statut HER2 négatif, avec expression de la chromogranine ou/et de la synaptophysine dans plus de 50% des cellules tumorales. Le statut ganglionnaire axillaire était positif dans 2 cas, non évalué dans 2 cas. Les dossiers cliniques (traitement adjuvant, survie) sont en cours d'analyse. Discussion: Les CS sont rares chez l'homme, en majorité hormonosensibles, de stade relativement avancé dans les grandes séries disponibles (1). Une différenciation neuroendocrine n'a été qu'exceptionnellement rapportée dans les CS de l'homme (2). Dans 2 des 4 cas rapportés ici elle est associée à une composante de carcinome papillaire solide. En l'absence de composante in situ, l'hypothèse d'une métastase est à considérer. Conclusion: L'incidence et les spécificités éventuelles de ce sous-groupe de CS, quant au pronostic et à la réponse aux traitements, restent à déterminer. Références : 1. Anderson WF et al. JCO 2010;28:232-9 ; 2. Potier B et al. Ann Chirur Plast 2010.

High heritability of ambulatory blood pressure in families of East African descent.

We estimated the heritability of ambulatory systolic blood pressure (SBP), diastolic blood pressure (DBP), and pulse pressure (PP) in east African families with at least 2 hypertensive siblings and living in the Seychelles islands (Indian Ocean). The sample consisted of 314 individuals (147 men and 167 women), both normotensive and hypertensive, from 76 pedigrees (mean+/-SD of 4.1+/-2.8 persons per pedigree). After a 2-week off-treatment period, daytime and nighttime ambulatory blood pressure (BP) was monitored. Office BP was measured with a standard mercury sphygmomanometer. We estimated by maximum likelihood the age- and sex-adjusted heritabilities from the additive polygenic component of the variance of the traits allowing for the presence of other familial correlations. We also adjusted for ascertainment (ie, for the fact that 2 siblings had to be hypertensive) and examined the effect of adjusting for body mass index, 24-hour urinary excretion of sodium and potassium, plasma renin activity, and plasma aldosterone concentration. Heritability estimates (+/-SE) for ambulatory SBP, DBP, and PP were, respectively, 0.37+/-0.12/0.24+/-0.12/0.54+/-0.12 for daytime and 0.34+/-0.13/ 0.37+/-0.15/0.47+/-0.12 for nighttime measurements (P<0.05 for all estimates). Heritability estimates for office SBP, DBP, and PP were, respectively, 0.20+/-0.11, 0.05+/-0.09, and 0.37+/-0.12. Heritability estimates for SBP varied markedly according to whether participants were treated for hypertension at baseline. The present data show that ambulatory BP and PP have a high heritability in families of African descent. They also demonstrate that antihypertensive treatment and the number of BP measurements have a major influence on the heritability estimates.

Ethnic differences in proximal and distal tubular sodium reabsorption are heritable in black and white populations.

BACKGROUND: Segmental handling of sodium along the proximal and distal nephron might be heritable and different between black and white participants. METHODS: We randomly recruited 95 nuclear families of black South African ancestry and 103 nuclear families of white Belgian ancestry. We measured the (FENa) and estimated the fractional renal sodium reabsorption in the proximal (RNaprox) and distal (RNadist) tubules from the clearances of endogenous lithium and creatinine. In multivariable analyses, we studied the relation of RNaprox and RNadist with FENa and estimated the heritability (h) of RNaprox and RNadist. RESULTS: Independent of urinary sodium excretion, South Africans (n = 240) had higher RNaprox (unadjusted median, 93.9% vs. 81.0%; P < 0.001) than Belgians (n = 737), but lower RNadist (91.2% vs. 95.1%; P < 0.001). The slope of RNaprox on FENa was steeper in Belgians than in South Africans (-5.40 +/- 0.58 vs. -0.78 +/- 0.58 units; P < 0.001), whereas the opposite was true for the slope of RNadist on FENa (-3.84 +/- 0.19 vs. -13.71 +/- 1.30 units; P < 0.001). h of RNaprox and RNadist was high and significant (P < 0.001) in both countries. h was higher in South Africans than in Belgians for RNaprox (0.82 vs. 0.56; P < 0.001), but was similar for RNadist (0.68 vs. 0.50; P = 0.17). Of the filtered sodium load, black participants reabsorb more than white participants in the proximal nephron and less postproximally. CONCLUSION: Segmental sodium reabsorption along the nephron is highly heritable, but the capacity for regulation in the proximal and postproximal tubules differs between whites and blacks.

Genetic association tests: a method for the joint analysis of family and case-control data.

With the trend in molecular epidemiology towards both genome-wide association studies and complex modelling, the need for large sample sizes to detect small effects and to allow for the estimation of many parameters within a model continues to increase. Unfortunately, most methods of association analysis have been restricted to either a family-based or a case-control design, resulting in the lack of synthesis of data from multiple studies. Transmission disequilibrium-type methods for detecting linkage disequilibrium from family data were developed as an effective way of preventing the detection of association due to population stratification. Because these methods condition on parental genotype, however, they have precluded the joint analysis of family and case-control data, although methods for case-control data may not protect against population stratification and do not allow for familial correlations. We present here an extension of a family-based association analysis method for continuous traits that will simultaneously test for, and if necessary control for, population stratification. We further extend this method to analyse binary traits (and therefore family and case-control data together) and accurately to estimate genetic effects in the population, even when using an ascertained family sample. Finally, we present the power of this binary extension for both family-only and joint family and case-control data, and demonstrate the accuracy of the association parameter and variance components in an ascertained family sample.

Regression analysis of spatial data.

Many of the most interesting questions ecologists ask lead to analyses of spatial data. Yet, perhaps confused by the large number of statistical models and fitting methods available, many ecologists seem to believe this is best left to specialists. Here, we describe the issues that need consideration when analysing spatial data and illustrate these using simulation studies. Our comparative analysis involves using methods including generalized least squares, spatial filters, wavelet revised models, conditional autoregressive models and generalized additive mixed models to estimate regression coefficients from synthetic but realistic data sets, including some which violate standard regression assumptions. We assess the performance of each method using two measures and using statistical error rates for model selection. Methods that performed well included generalized least squares family of models and a Bayesian implementation of the conditional auto-regressive model. Ordinary least squares also performed adequately in the absence of model selection, but had poorly controlled Type I error rates and so did not show the improvements in performance under model selection when using the above methods. Removing large-scale spatial trends in the response led to poor performance. These are empirical results; hence extrapolation of these findings to other situations should be performed cautiously. Nevertheless, our simulation-based approach provides much stronger evidence for comparative analysis than assessments based on single or small numbers of data sets, and should be considered a necessary foundation for statements of this type in future.

Reproducibility of species lists, visual cover estimates and frequency methods for recording high mountain vegetation

Question: When multiple observers record the same spatial units of alpine vegetation, how much variation is there in the records and what are the consequences of this variation for monitoring schemes to detect change? Location: One test summit in Switzerland (Alps) and one test summit in Scotland (Cairngorm Mountains). Method: Eight observers used the GLORIA protocols for species composition and visual cover estimates in percent on large summit sections (>100 m2) and species composition and frequency in nested quadrats (1 m2). Results: The multiple records from the same spatial unit for species composition and species cover showed considerable variation in the two countries. Estimates of pseudoturnover of composition and coefficients of variation of cover estimates for vascular plant species in 1m x 1m quadrats showed less variation than in previously published reports whereas our results in larger sections were broadly in line with previous reports. In Scotland, estimates for bryophytes and lichens were more variable than for vascular plants. Conclusions: Statistical power calculations indicated that, unless large numbers of plots were used, changes in cover or frequency were only likely to be detected for abundant species (exceeding 10% cover) or if relative changes were large (50% or more). Lower variation could be reached with the point methods and with larger numbers of small plots. However, as summits often strongly differ from each other, supplementary summits cannot be considered as a way of increasing statistical power without introducing a supplementary component of variance into the analysis and hence the power calculations.

Toll-Interacting Protein Deficiency Leads to Increased Susceptibility to Acute and Chronic Colitis.

BACKGROUND: Sensing of bacterial products via Toll-like receptors is critical to maintain gut immune homeostasis. The Toll-Interacting Protein (Tollip) inhibits downstream signaling through the IL-1 receptor, TLR-2 and TLR-4. Here,we aimed to address the role of Tollip in acute and chronic inflammatory responses in the gut. MATERIAL AND METHODS: WT or Tollip-deficient mice were exposed to dextran sulfate sodium (DSS) 1.5% in the drinking water during 7 days. To generate bone-marrow chimeras, WT or Tollip deficient mice were 900-rads irradiated, transplanted with WT or Tollip deficient bone-marrow cells and challenged with DSS 2-3 months after transplantation. IL-10 deficient mice were bred with Tollip deficient mice and colitis was compared at various time points. RESULTS: Upon DSS exposure, Tollip-deficient mice had increased body weight loss and increased pro-inflammatory cytokine expression compared to WT controls. Challenge of bone-marrow chimeras showed that colitis susceptibility was also increased when Tollip deficiency was restricted to non-hematopoietic cells. DSS-exposure lead to a disorganized distribution of zona-occludens-1, a tight junction marker and increased number of apoptotic, cleaved caspase 3 positive, epithelial cells in Tollip-deficient compared to WT mice. Chronic colitis was also affected by Tollip deficiency as Tollip/IL-10 deficient mice had more severe histological stigmata of colitis and higher IL-17 expression than IL-10 deficient controls. CONCLUSION: Tollip in non-hematopoietic cells is critical for adequate response to a chemical-induced stress in the gut and to hamper chronic bacteria-driven colitis. Modulation of epithelial cell integrity via Tollip likely contributes to the observed defects.

Predição de ganho genético com diferentes índices de seleção no milho pipoca CMS-43

O melhoramento simultâneo da capacidade de expansão e da produtividade no milho pipoca são dificultados por causa da correlação negativa entre as duas características, mas o uso de índices de seleção permite contornar essa dificuldade. Em 1997/1998 foram avaliadas 166 famílias de meios-irmãos do composto de milho pipoca (Zea mays L.) CMS-43, na Embrapa-Centro Nacional de Pesquisa de Milho e Sorgo, em Sete Lagoas, MG, no delineamento em blocos casualizados. Os índices de seleção empregados para predizer os ganhos por seleção foram os de Smith e Hazel, Pesek & Baker, Elston e de Williams. O índice de seleção de Smith e Hazel permitiu a predição de ganhos superiores em maior número de caracteres; com o índice de seleção de Williams não se verificou nenhum dado significativo. O uso de índices de seleção é adequado porque permite a predição de ganhos simultâneos nas duas principais características.

Seleção em progênies de maracujazeiro-amarelo com base em índices multivariados

O objetivo deste trabalho foi avaliar os ganhos genéticos, preditos por meio de diferentes índices de seleção, em seis caracteres relacionados ao fruto, em 16 progênies de meios-irmãos de maracujá-amarelo. Foram utilizados: o índice clássico de Smith & Hazel (IC) e a distância genótipo-ideótipo de Cruz (IDGI), ambos com três pesos econômicos; o índice de ganhos desejados de Pesek & Baker (IGD); o índice livre de pesos e parâmetros de Elston (ILPP); e a seleção direta (SD). Observaram-se altas correlações genotípicas, de maior magnitude do que as fenotípicas, para algumas características, o que indica a existência de genes pleiotrópicos. Foram selecionadas cerca de 14% das plantas, para intercruzamento e formação de novo ciclo de seleção. Os critérios de seleção foram divergentes, inclusive para o mesmo índice de seleção com diferentes pesos econômicos, o que revela alta divergência das progênies estudadas. A SD permitiu a obtenção de ganhos preditos desejáveis para todos os caracteres, porém em magnitudes inferiores a outros índices. Embora o IC tenha possibilitado a obtenção de maiores ganhos genéticos em relação ao peso e ao número de frutos por planta, houve ganho negativo para alguns caracteres. O IDGI foi superior na predição de maiores ganhos genéticos, de forma equilibrada para todos os caracteres, enquanto o ILPP mostrou o pior desempenho.

Sistemas de graduação para carcinoma de mama: estudo comparativo da concordância cito-histológica

OBJETIVOS: avaliar a concordância das classificações citológicas de graduação tumoral e nuclear nos esfregaços de punção aspirativa por agulha fina (PAAF) de carcinoma de mama com os métodos utilizados nos espécimes histológicos e compará-los para identificar aqueles que apresentam melhores resultados. MÉTODOS: a avaliação da concordância cito-histológica foi realizada em estudo retrospectivo de 50 casos de PAAF de carcinoma ductal invasivo de mama, confirmados histologicamente, aplicando-se de forma comparativa cinco sistemas de graduação. As classificações foram separadas segundo critérios de graduação tumoral (critérios nucleares e arquiteturais - sistemas de Mouriquand e de Guilford) e nuclear (sistemas de Black modificado por Fisher - BM, de Black simplificado - BS e de Hunt). As classificações utilizadas na histologia foram os sistemas de graduação de Scarff-Bloom-Richardson modificado por Elston (SBR modificado), para avaliação tumoral, e os de BM, para avaliação nuclear. RESULTADOS: os sistemas de graduação citológica que apresentaram maior concordância foram os sistemas de BM (K=0,358) e BS (K=0,302), baseados em critérios nucleares (anisonucleose, tamanho, mitose e cromatina). Dentre os sistemas de graduação citológica que apresentam critérios nucleares e arquiteturais, a classificação de Guilford demonstrou maior concordância (K=0,260), possivelmente pelo número maior de variáveis utilizadas, possibilitando menor margem de erro. CONCLUSÃO: no presente estudo, estes métodos mostraram-se regulares como sistemas de graduação citológica.

Detection and analysis of apoptosis in peripheral blood cells from breast cancer patients

Apoptosis is a well-known specific process of cell death that normally occurs in physiological situations such as tissue or organ development and involution. During tumor growth there is a balance between proliferation and cell death which involves apoptotic mechanisms. In the present study genomic DNAs from 120 breast tumor biopsies were analyzed by agarose gel electrophoresis and none of them presented the fragmentation pattern characteristic of the apoptosis process. However, 33% of the 105 breast cancer patients clearly showed the apoptotic pattern when DNA from blood cells was analyzed. None of the DNAs from healthy volunteer blood cells showed any trace of apoptosis. Since the breast cancer patients were not receiving chemo- or hormone therapy, the possible relationship between blood cortisol levels and the apoptotic pattern found in patient blood cells was investigated. Using a chemoluminescence immunodetection assay, similar cortisol levels were observed in breast cancer patient sera presenting or not apoptotic blood cells and in healthy volunteer sera. Analysis of the clinical data obtained from 60 of these patients showed that patients bearing tumors of smaller size (under 20 mm) were more susceptible to the apoptotic effect in blood cells. According to the Elston grade, it was observed that 7 of 12 patients with grade III tumors (58%) presented apoptotic peripheral blood cells, in contrast to 10 of 48 patients with grade I and grade II tumors. These observations may reflect the immunosuppression characteristic of some breast cancer patients, which may contribute to tumor growth. Therefore, further studies are necessary to elucidate the factor(s) involved in such massive blood cell death.

Does the correlation between EBNA-1 and p63 expression in breast carcinomas provide a clue to tumorigenesis in Epstein-Barr virus-related breast malignancies?

Several investigators have identified Epstein-Barr virus (EBV) particles in breast carcinomas, a fact that supports a role for EBV in mammary tumorigenesis. The possible mechanism involved in this process is not clear. The present study was carried out in an attempt to determine whether there is a relationship between latent infection with EBV and p53 and p63 expression in breast carcinomas. Immunohistochemistry developed with 3.3-diaminobenzidine tetrahydrochloride was performed in 85 formalin-fixed paraffin-embedded breast carcinomas using anti-EBV EBNA-1, anti-p63, anti-p53, anti-estrogen receptor (ER) and anti-progesterone receptor (PR) antibodies. The cases were selected to represent each of the various histologic types: intraductal carcinoma (N = 12), grade I invasive ductal carcinoma (N = 15), grade II invasive ductal carcinoma (N = 15), grade III invasive ductal carcinoma (N = 15), tubular carcinoma (N = 8), lobular carcinoma (N = 10), and medullary carcinoma (N = 10). The ductal breast carcinomas were graded I, II and III based on the Scarff-Bloom and Richardson grading system modified by Elston and Ellis. One slide containing at least 1000 neoplastic cells was examined in each case. ER, PR, p63, p53 and EBNA-1 were positive in 60, 40, 11.8, 21.2 and 37.6% of carcinomas, respectively. There was a correlation between EBNA-1 and p63 expression (P < 0.001), but not between EBNA-1 and p53 (P = 0.10). These data suggest a possible role for p63 in the mammary tumorigenesis associated with Epstein-Barr virus infection.