Poço de infiltração para controle de enchentes na fonte: avaliação das condições de operação e manutenção

This study investigated the following aspects regarding a soakaway, i.e. an infiltration well: i) entrance filter device; ii) permeability of the geotextile; and iii) emptying time. The 3.6 m³ infiltration well drains a roof area of 241.8 m². The entrance device is made up of layers of sand, gravel and geotextile set on a metal structure. The concrete rings that form the lateral walls were covered with geotextile, and bricks were laid between the soil and concrete rings. The infiltration well remained in operation during the entire testing period, and specific events were simulated to measure the emptying time. Permeability and fine particle tests were carried out after eight months of operation. Samples of geotextile taken from the bottom, the walls and the entrance device presented average permeability reductions of approximately 50.7%, 7.7% and 21.2%, respectively. The sand in the entrance device retained around 34.8% of fine particles and the gravel retained 0.13% in the same period. The infiltration rate was approximately 34.7 mm/h. The R2 coefficient for measured and calculated times was 0.97.

Infiltração de água em um podzólico vermelho-escuro sob dois métodos de preparo, usando chuva simulada com duas intensidades

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Characterization of Soil Surface Roughness Effects on Runoff and Soil Erosion Rates under Simulated Rainfall

This study aims at identifying the influence of soil surface roughness from small to large aggregates (random roughness) on runoff and soil loss and to investigate the interaction with soil surface seal formation. Bulk samples of a silty clay loam soil were sieved to four aggregate-size classes of 3 to 12, 12 to 20, 20 to 45, 45 to 100 mm, and packed in soil trays set at a 5% slope. Rainfall simulations using an oscillating nozzle simulator were conducted for 90 min at an average rainfall intensity of 50.2 mm h(-1). Soil surface roughness was measured using an instantaneous profile laser scanner and surface sealing was studied by macroscopic analysis of epoxy impregnated soil samples. The rainfall simulations revealed longer times to initiate runoff with increasing soil surface roughness. For random roughness levels up to 6 mm, a decrease in final runoff rate with increasing roughness was observed. This can be attributed to a decreased breakdown of the larger roughness elements on rougher surfaces, thus keeping infiltration rate high. For a random roughness larger than 6 mm, a greater final runoff rate was observed. This was caused by the creation of a thick depositional seal in the concentrated flow areas, thus lowering the infiltration rates. Analysis of impregnated soil sample blocks confirmed the formation of a structural surface seal on smooth surfaces, whereas thick depositional seals were visible in the depressional areas of rougher surfaces. Therefore, from our observations it can be learned that soil surface roughness as formed by the presence of different aggregate sizes reduces runoff but that its effect diminishes due to aggregate breakdown and the formation of thick depositional seals in the case of rough soil surfaces. Sediment concentration increased with increasing soil surface roughness, due to runoff concentration in flow paths. Nevertheless, final soil loss rates were comparable for all soil roughness categories, indicating that random roughness is only important in influencing runoff rates and the time to initiate runoff, but not in influencing sediment export through soil loss rates.

Mobilização do solo, velocidade de infiltração de água e taxa de cobertura do solo na grama esmeralda, sob manejos mecanizados

The excessive compaction of the soil observed in sod production systems, affects the physical attributes of the soil, which can influence the water infiltration into the soil and hence the rate of soil cover by turfgrasses and time of the sod production. To minimize the effects of soil compacting, some producers use soil preparation equipment that raises the soil on the surface but does not cause excessive roughness which may harm the quality of the sod. Thus, the aim of the present study was to evaluate the infiltration rate and soil cover rate due to different management mechanized in the zoysiagrass sod production. The experimental design had random plots and four replications. The treatments consisted of five mechanized managements of soil: witness (without the use of equipment); coulter blade disc harrow used once (1CB), coulter blade disc harrow used twice (2CB), surface chisel used once (1C), surface chisel and coulter blade disc harrow used once (1C + 1CB). The treatments with 2CB and 1C + 1CB provided greater basic water infiltration speed in the soil and higher rate of soil cover by the turfgrass. The rate of soil cover by turfgrass is positively correlated with water infiltration rate at 133 and 226 DAP, demonstrating the influence of managements used in zoysiagrass sod production and the increment in the infiltration rate of water. Soil preparation utilizing coulter blade disc harrow used twice or surface chisel and coulter blade disc harrow used once is recommended under the conditions this study was done.

Comportamento do carbono orgânico e de atributos químicos, físicos e microbiológicos de um solo arenoso em área de conversão pastagem - Eucalipto

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

A multi-tracer study of groundwater origin and transit-time in the aquifers of the Venice region (Italy)

Located in the northeastern region of Italy, the Venetian Plain (VP) is a sedimentary basin containing an extensively exploited groundwater system. The northern part is characterised by a large undifferentiated phreatic aquifer constituted by coarse grain alluvial deposits and recharged by local rainfalls and discharges from the rivers Brenta and Piave. The southern plain is characterised by a series of aquitards and sandy aquifers forming a well-defined artesian multi-aquifer system. In order to determine origins, transit times and mixing proportions of different components in groundwater (GW), a multi tracer study (H, He/He, C, CFC, SF, Kr, Ar, Sr/Sr, O, H, cations, and anions) has been carried out in VP between the rivers Brenta and Piave. The geochemical pattern of GW allows a distinction of the different water origins in the system, in particular based on View the MathML source HCO3-,SO42-,Ca/Mg,NO3-, O, H. A radiogenic Sr signature clearly marks GW originated from the Brenta and Tertiary catchments. End-member analysis and geochemical modelling highlight the existence of a mixing process involving waters recharged from the Brenta and Piave rivers, from the phreatic aquifer and from another GW reservoirs characterised by very low mineralization. Noble gas excesses in respect to atmospheric equilibrium occur in all samples, particularly in the deeper aquifers of the Piave river, but also in phreatic water of the undifferentiated aquifers. He–H ages in the phreatic aquifer and in the shallower level of the multi-aquifer system indicate recharge times in the years 1970–2008. The progression of H–He ages with the distance from the recharge areas together with initial tritium concentration (H + Hetrit) imply an infiltration rate of about 1 km/y and the absence of older components in these GW. SF and Kr data corroborate these conclusions. H − He ages in the deeper artesian aquifers suggest a dilution process with older, tritium free waters. C Fontes–Garnier model ages of the old GW components range from 1 to 12 ka, yielding an apparent GW velocity of about 1–10 m/y. Increase of radiogenic He follows the progression of C ages. Ar, radiogenic He and C tracers yield model-dependent age-ranges in overall good agreement once diffusion of C from aquitards, GW dispersion, lithogenic Ar production, and He production-rate heterogeneities are taken into account. The rate of radiogenic He increase with time, deduced by comparison with C model ages, is however very low compared to other studies. Comparison with C and C data obtained 40 years ago on the same aquifer system shows that exploitation of GW caused a significant loss of the old groundwater reservoir during this time.

The Effects Of Reinforcement Inclusions On Wear Tolerance, Playing Quality And Physical Properties In A Silt Loam And Sand Rootzone Matrix

Reinforcement inclusions have been advocated to alleviate wear, compaction, and unstable surfaces in sports fields, but little research on the effects of these materials has been conducted in the USA. Experiments were established on a native silt loam and a sand rootzone matrix, seeded with a Kentucky bluegrass (Poa pratensis L.) blend, at the Joseph Troll Turf Research Center, University of Massachusetts, Amherst, USA to determine the effects of reinforcement inclusions on wear, surface hardness, traction, ball roll, ball bounce resilience, water infiltration rate, soil bulk density, air porosity, total porosity, and root weights. Three types of reinforcement inclusions (Sportgrass, Netlon, Turfgrids) were tested along with a non-reinforced control in a three year study. The treatments were set out in a randomized complete block design with four replications in both soils. No inclusion provided less wear or greater infiltration or air-filled porosity relative to the control. Reinforcement inclusions showed significant differences, however, in surface hardness, traction, and ball roll relative to the control, although this varied with the time of year. Infiltration rates, airfilled porosity, total pore space, bulk density, hardness, traction, ball roll, and ball rebound were greater on the sand rootzone than on the silt loam. Significant correlations were present between soil bulk density, surface hardness, traction, and ball roll. Based on our study, the use of reinforcement inclusions to provide better wear tolerance for sand or native soil athletic fields is not warranted. Certain playing surface characteristics, however, may be slightly improved with the use of reinforcement inclusions. The use of sands for sports surfaces is justified based upon the improvement in playing quality characteristics and soil physical properties important to a good playing surface.

Caracterización de tres suelos en Hidalgo y Querétaro, México: disponibilidad y daño tóxico por arsénico en garbanzo (Cicer arietinum L.)

La presencia de arsénico (As) en suelos permite su migración hacia cultivos como el garbanzo (Cicer arietinum L.). En este trabajo se comparan contenidos de As en tres suelos de dos estados de la República Mexicana, y su acumulación en C. arietinum L. Los suelos resultaron moderadamente alcalinos, no salinos, reductores intermedios y con potenciales zeta (pZ) que indican suspensiones coloidales moderadamente estables. Con moderados contenidos de humedad y texturas franco- arcillosas, densidad aparente, capacidad de campo, agregados estables y capacidad de intercambio catiónico, significativamente diferentes y semejantes en velocidad de infiltración y espesor del horizonte A. En materia orgánica, carbono y nitrógeno son significativamente diferentes y con bajos contenidos. Existen diferencias importantes entre semillas de C. arietinum L. certificadas o no en su capacidad de germinación y desarrollo de raíces. El efecto genotóxico del As en raíces de C. arietinum L. se apreció por inducción de micronúcleos, reducción de 2,8 veces la división celular de muestras tratadas con agua con As, respecto de muestras control. Se apreció incremento de As de 9,5 veces en plántulas germinadas en suelo de El Salitre, que en suelo de Bella Vista, indicativo de migración del As. La suma de efectos de concentración de As en suelos y agua se incrementa 15,3 veces. Entre suelos de Bella Vista y Querétaro la correlación fue 2,9 veces mayor. En controles positivos los IBAs resultan 3 veces mayores que en las pruebas experimentales.

Estudio del empleo de cubiertas vegetales temporales para la regulación del régimen hídrico, crecimiento y manejo sostenible del viñedo

RESUMEN El ensayo se llevo a acabo en un viñedo de Syrah durante 8 años y en un viñedo de Merlot durante 3 años. Ambos viñedos regados y situados en Colmenar de Oreja (Madrid) (40º 8’N, 3º 23’W) con clima típicamente Mediterráneo. Siete tratamientos con cubiertas vegetales se han comparado con dos tratamientos con suelo desnudo usados como control. Las cubiertas vegetales fueron seis tratamientos de cereales (Centeno) y un tratamiento de enyerbado autosembrado (Bromus spp) y los tratamientos de suelo desnudo fueron uno manejado con laboreo y otro manejado con herbicida. Los seis tratamientos de centeno se han manejado de seis formas distintas. La primera sembrada todos los años y eliminada en brotación mediante herbicida de post-emergencia. La segunda sembrada todos los años y eliminada un mes después de la brotación mediante siega. La tercera sembrada todos los años y eliminada en floración mediante siega. La cuarta sembrada todos los años y eliminada en brotación mediante herbicida de post-emergencia. La quinta sembrada todos los años y eliminada un mes después de la brotación mediante siega. La sexta sembrada todos los años y eliminada en floración mediante siega. La utilización de cubiertas vegetales ha tenido efectos beneficiosos sobre el contenido en materia orgánica, la compactación y la infiltración del suelo, mejorando las condiciones para el desarrollo de las raíces. Estas mejoras y la escasa competencia de la competencia durante el crecimiento del sistema radical de la vid han producido un incremento del sistema radical en las plantas mantenidos con cubierta vegetal. La competencia de las cubiertas vegetales ha reducido la disponibilidad hídrica de la vid, incrementándose la absorción en zonas con mayor disponibilidad hídrica (como la línea) antes de floración. El mayor desarrollo radical de las vides con cubierta autosembrada ha permitido agotar más intensamente las reservas de agua en el suelo. La competencia de las cubiertas ha reducido en mayor medida el desarrollo vegetativo que el productivo. Lo que ha disminuido, en algunas cubiertas vegetales, el consumo hídrico de la vid, aumentando el potencial hídrico foliar y la fotosíntesis durante la maduración. Sin embargo, el incremento en la fotosíntesis no ha compensado el mayor desarrollo foliar de los tratamientos con suelo desnudo, lo que ha provocado que estos tratamientos presenten la producción de materia seca más elevada. El empleo de cubiertas vegetales ha reducido la producción principalmente limitando el número de bayas por racimo, ya que el aporte de riego ha minimizado los efectos del manejo del suelo sobre el tamaño de baya. La utilización de cubiertas vegetales temporales ha mejorado la iluminación de los racimos, lo que ha producido un aumento de la síntesis de antocianos durante las primeras fases de la maduración, pero un incremento de la degradación de los mismos al final de la maduración. Esto ha provocado que durante la vendimia los tratamientos de suelo desnudo presenten un mayor contenido de antocianos por baya que los tratamientos mantenidos con cubierta temporal. Estos resultados muestran que el efecto del manejo del suelo depende en gran medida de las condiciones del medio, y que sus efectos en climas calidos y secos son muy distintos a los observados en climas frescos y húmedos. ABSTRACT The trial was conducted over a period of 8 years in a Syrah vineyard and over a period of 3 years in a Merlot vineyard. Both vineyards were irrigated and situated near Colmenar de Oreja (Madrid) (40º 8’N, 3º 23’W) a typical Mediterranean climate. Seven Annual cover crops treatments were compared to two bare soil treatments, used as control. Cover crops were six cereals treatments (Rye) and one auto-sowing treatment (Bromus spp) and the treatments of bare soil were one tilled management treatment and another with herbicide treatment. The six Cereal treatments were managed in different manners. First sowing every year and were eliminated in bud breaking with post-emergency herbicide. The second sowing annually and were eliminated one month after bud breaking through harvesting. The third sowing annually and were eliminated in flowering by mowing. The fourth sowing annually and were eliminated with post-emergency herbicide in bud breaking. The fifth sowing annually and were eliminated by mowing one month after bud breaking. . The third sowing annually was eliminated by mowing in flowering. The use of annual cover crop have improved soil organic matter, soil infiltration rate and soil solidity, resulting in a more favourable environment for roots growth. These improvements and low competitive ability during root growing have increases grapevine root density in plant management with cover crop. The Cover crop ability reduced plant available water, increasing root water uptake in the soil with more available water (such us line) before flowering. More growth of grapevine root density with auto-sowed cover crops has allowed using the water under soil more rapidly. The cover crop ability has reduced vegetative growth more than yield. What has been reduced in some vegetative cover crop has been the consumption of water, and increasing the leaf water potential and foliar and photosynthesis during growth activity. Moreover, the increased in photosynthesis activity could not “Compensate” higher leaf growth of treatment of bare soil, where these treatments had resulted in the greatest amount of dry material. The use of cover crops has reduced the crop mainly reducing the fruit set, because the irrigation had reduced the cover crop effect in the berry growth. The use of temporary cover crop increased berry sunlight exposure and skin anthocyanin synthesis during early rippenig, but excessively high temperature increased anthocyanin degradation during last part of ripenning. So, at the vineyard harvest period the treatments with bare soil plant had a more anthocyanin content per grape than the temporary cover crop plant treatments. These results suggest that the effects of soil handling mainly depends on the environmental condition, and their effects in hot and dry climate are so different from the effects in cold and moist climates.

Bio recuperación de suelos salinos con el uso de materiales orgánicos.

El suelo es un importante recurso natural que necesita ser preservado y mejorado para permitirle mantener su calidad y capacidad productiva, para ello se deben proponer y aplicar prácticas sostenibles que permitan recuperar aquellos suelos degradados por un mal manejo del hombre, como por ejemplo la salinización. El objetivo planteado fue evaluar la biorecuperación de un suelo con problemas salino-sódico con la aplicación de dos proporciones (1,5 y 3% (p/p)) de tres enmiendas orgánicas: compost, vermicompost sólido y Lemna mesclados o no con el 100% de los requerimientos de fosfoyeso, generándose 15 tratamientos (incluyendo tres controles). La evaluación se realizó a través de tres ensayos: 1. Columnas simuladas de suelo. 2. Evolución de CO2 y 3. Crecimiento de plántulas de tomate. El suelo objeto de estudio está clasificado my como Fluventic Haplustepts, y fue tomado de una zona de la Hacienda Alto Viento, con una latitud de 10° 2' 15 N y una longitud de 72 ° 34' 15 W, en el estado de Zulia – Venezuela. Se tomó una muestra compuesta por 20 submuestras de 20 cm de profundidad del área problema, se secó al aire (2,3% de humedad), se tamizó y homogenizó. El suelo y las enmiendas orgánicas fueron caracterizadas. Los materiales orgánicos; compost y vermicompost fueron procesados en la misma Hacienda con el uso de estiércol de ganado bovino; la Lemna fue recolectada de orillas del Lago de Maracaibo en la ciudad de Maracaibo. El suelo se mezcló a las proporciones indicadas se le midió respiración basal y el efecto sobre la germinación de semillas de tomate y se empaquetó en un tubo de polietileno de 7,1 cm de diámetro y 70 a 90 cm de longitud, según la altura de la mezcla del suelo con la enmienda. El fondo de cada columna fue rellenado con 40 cm de arena lavada para facilitar el drenaje. En cada columna se utilizó la misma cantidad de suelo (1055 mg), la altura que ocupó dentro de las columnas dependió del tipo de enmienda orgánica y su proporción, la cual modificó la Da del suelo (1,328±0,05 g•cm-3). La altura dentro de la columna varió desde 20 cm para el suelo sin enmienda hasta 38,33±0,8 cm para el suelo enmendado con Lemna al 3,0%. Transcurrido el periodo de tres meses tiempo en el cual el suelo enmendado y colocado en las columnas fue lavado con una cantidad de agua que equivalente a la tasa de infiltración, la cual se calculó a partir de la precipitación anual de la zona y las perdidas por evaporación y escorrentía; se fraccionó en tres secciones de 7, 7 y 6 cm de longitud, y el suelo de cada fracción se secó al aire y se tamizó, y se le midió CEextr, pH, cationes en solución y cationes extraíbles para calcular el RAS y el PSI. Se tomó una cantidad equivalente de cada sección para conformar una muestra de 50 g de suelos a los cuales se le midió respiración basal e igualmente se tomó suelo para evaluar la germinación y crecimiento de plántulas de tomate. Se detectaron diferencias significativa (p<0,05) entre tratamientos, según la prueba de Tukey, para la variables evaluadas, aunque no hubo diferencias entre las proporciones ni entre la utilización del fosfoyeso mezclado con las enmiendas orgánicas. La enmienda que mostró menos potencial en la bio remediación fue la Lemna por sus altos contenidos de Na+. La metodología de las columnas simuladas del suelo, bajo las condiciones de estudio, no fue del todo adecuada para evaluar la bio remediación debido que en el suelo control por efecto de la aplicación de agua también hubo recuperación del mismo por su disminución en el la CE, RAS y PSI y en algunas variables su recuperación fue mayor que en aquellos enmendados con Lemna. Tomando en la respuesta del cultivo la mejor enmienda fue el vermicompost Abstract The soil is an important natural resource that needs to be preserved and improved to maintain its quality and production potential. Therefore, it is necessary to propose and apply sustainable practices that permit the recovery of soils that have been degraded by inadequate management, among these saline soils. The objective of this study was to evaluate the bioremediation of a saline-sodic soil through the application of two proportions (1,5 and 3% (p/p) of three organic amendments: compost, vermicompost and Lemna, mixed or not with gypsum phosphate, resulting in 15 treatments (including 3 controls). The evaluation was conducted through three tests: 1. Simulated soil columns. 2. Evolution of CO2 and 3. Growth of tomato seedlings The soil under evaluation was classified as Fluventic Haplustepts and was collected from the Alto Viento farm located at 10° 2' 15 North Latitude and 72° 34' 15 West longitude, in Zulia State, Venezuela. A composite soil sample, integrated of 20 subsamples taken to a depth of 20 cm collected in the problem area, was air dried (2.3 % moisture), sieved and homogenized. Soil and organic amendments were characterized. Organic material for the compost and vermicompost were obtained on the farm using cattle manure, whereas the Lemna was collected from the shores of Lake Maracaibo outside Maracaibo city. The soil was mixed in the above-mentioned proportions and its baseline respiration rate and effect on the germination of tomato seeds were recorded. Soil was packed in a PVC pipe (7,1 cm diameter and 70-90 cm length) to simulate a soil column. The bottom of each column was filled out with 40 cm of washed sand to facilitate drainage. The same amount of soil was used in each column (1,055 mg), but the height of the column varied according to the organic amendment and its proportion, which modified the apparent density of the soil (1,328±0,05 g•cm-3). The height of each column varied from 20 cm for the soil without amendment to 38,33±0,8 cm for the soil with 3% Lemna. After three months, the soil was treated with water (using the equivalent of the problem area infiltration rate), and was divided into three sections (7, 7 and 6 cm length). The soil from each section was air dried, sieved and its cationic exchange capacity, pH, cation solutions and extractable cations were measured to estimate RAS and PSI. An equivalent portion of each section was collected to compose a 50 g soil sample, and baseline respiration rate and tomato seedlings growth were recorded. Statistical differences (p<0,05) were observed among treatments for the variables under evaluation. Tukey test showed no differences among the proportions of organic amendments nor with the addition of gypsum phosphate to the organic amendments. The amendment which showed the lowest bioremediation potential was the Lemna, as a result of its high Na+ concentration. Under the conditions of this study, the soil column methodology used showed limitations to evaluate bioremediation because the control soil column, after being rinsed with water, also showed improvements as CE, RAS and PSI values were reduced. For some variables, the improvement noted in the control soil column surpassed those obtained with the soil amended with Lemna. Based on the best crop response amendment was vermicompost 3%.

Effect of integrated reservoir tillage for in-situ rainwater harvesting and other tillage practices on soil physical properties

There is a need for in-situ soil moisture conservation in arid and semi-arid regions due to insufficient rainfall for agriculture. For this purpose, a combination implement [integrated reservoir tillage system (RT)] comprised of a single-row chisel plow, single-row spike tooth harrow, modified seeder, and spiked roller was developed and compared to the popular tillage practices, viz., minimum tillage (MT) and conventional tillage (CT) in an arid Mediterranean environment in Egypt. The different tillage practices were conducted at tillage depths of 15, 20, and 25 cm and forward speeds of 0.69, 1, 1.25, and 1.53 m s-1. Some soil physical properties, runoff, soil loss, water harvesting efficiency and yield of wheat were evaluated. The different tillage practices caused significant differences in soil physical properties as the RT increased soil infiltration, producing a rate of 48% and 65% higher than that obtained in MT and CT, respectively. The lowest values of runoff and soil loss were recorded under RT as 4.91 mm and 0.65 t ha-1, whereas the highest values were recorded under CT as 11.36 mm and 1.66 t ha-1, respectively. In conclusion, the RT enhanced the infiltration rate, increased water harvesting efficiency, reduced runoff and achieved the highest yield of wheat. The best tillage operating parameters appeared to be at a tillage depth of 20 cm and speed between 1.00 and 1.25 m s-1.

(Tables 1-3) Geochemical composition of seepage water in soils obtained in Schleswig-Holstein, Germany

Under defined laboratory and field conditions, the investigation of percolating water through soil columns (podsol, lessive and peat) down to groundwater table shows that the main factors which control the chemical characteristics of the percolates are: precipitation, evaporation, infiltration rate, soil type, depth and dissolved organic substances. Evaporation and percolation velocity influences the Na+, SO4**2- and Cl- concentrations. Low percolation velocity leads also to longer percolation times and water logging in less permeable strata, which results in lower Eh-values and higher CO2-concentrations due to low gas exchange with the atmosphere. Ca2+ and Mg2+ carbonate concentration depends on soil type and depth. Metamorphism and decomposition of organic substances involve NO3 reduction and K+, Mg2+, SO4**2-, CO2, Fe2+,3+ transport. The analytical data were evaluated with multi variate statistical methods.

Contributo da agricultura de conservação na prevenção do encharcamento e dos riscos de halomorfização dos solos argilosos na cultura de milho na área de influência de Alqueva

This study aims to evaluate the contribution of no-till (SD) and cover crops (CC) in mitigating the risk of salinity / sodicity of the soil. We tested whether the increase of soil infiltration rate and the reduction of the direct evaporation, achieved with a high amount of residues on the soil surface from the CC followed by SD, would enable a smaller accumulation of salts during the summer and more leaching of salt during winter. The experiment The experiment included two tillage systems: no-till associated to a winter cover crop (SD / CC) and the conventional system (SC) (chisel and disc harrows), divided into two water regimes and two levels of water salinity (0.7 dS m-1 and 2.0 dS m-1), both with adsorption sodium ratio 3. Contrary to expectations CC showed a tendency to increase salt content in Fall-Winter period, due to the reduction of the fraction available to leaching, but showed advantages in reducing long term salt content due to the improved structure of the B horizon, because decreases the tendency to the reduction of the structure of this horizon, caused typically by the permanent high moisture content during.

Are in vitro estimates of cell diffusivity and cell proliferation rate sensitive to assay geometry?

Cells respond to various biochemical and physical cues during wound–healing and tumour progression. In vitro assays used to study these processes are typically conducted in one particular geometry and it is unclear how the assay geometry affects the capacity of cell populations to spread, or whether the relevant mechanisms, such as cell motility and cell proliferation, are somehow sensitive to the geometry of the assay. In this work we use a circular barrier assay to characterise the spreading of cell populations in two different geometries. Assay 1 describes a tumour–like geometry where a cell population spreads outwards into an open space. Assay 2 describes a wound–like geometry where a cell population spreads inwards to close a void. We use a combination of discrete and continuum mathematical models and automated image processing methods to obtain independent estimates of the effective cell diffusivity, D, and the effective cell proliferation rate, λ. Using our parameterised mathematical model we confirm that our estimates of D and λ accurately predict the time–evolution of the location of the leading edge and the cell density profiles for both assay 1 and assay 2. Our work suggests that the effective cell diffusivity is up to 50% lower for assay 2 compared to assay 1, whereas the effective cell proliferation rate is up to 30% lower for assay 2 compared to assay 1.

Estimating cell diffusivity and cell proliferation rate by interpreting IncuCyte ZOOM™ assay data using the Fisher-Kolmogorov model

Background: Standard methods for quantifying IncuCyte ZOOM™ assays involve measurements that quantify how rapidly the initially-vacant area becomes re-colonised with cells as a function of time. Unfortunately, these measurements give no insight into the details of the cellular-level mechanisms acting to close the initially-vacant area. We provide an alternative method enabling us to quantify the role of cell motility and cell proliferation separately. To achieve this we calibrate standard data available from IncuCyte ZOOM™ images to the solution of the Fisher-Kolmogorov model. Results: The Fisher-Kolmogorov model is a reaction-diffusion equation that has been used to describe collective cell spreading driven by cell migration, characterised by a cell diffusivity, D, and carrying capacity limited proliferation with proliferation rate, λ, and carrying capacity density, K. By analysing temporal changes in cell density in several subregions located well-behind the initial position of the leading edge we estimate λ and K. Given these estimates, we then apply automatic leading edge detection algorithms to the images produced by the IncuCyte ZOOM™ assay and match this data with a numerical solution of the Fisher-Kolmogorov equation to provide an estimate of D. We demonstrate this method by applying it to interpret a suite of IncuCyte ZOOM™ assays using PC-3 prostate cancer cells and obtain estimates of D, λ and K. Comparing estimates of D, λ and K for a control assay with estimates of D, λ and K for assays where epidermal growth factor (EGF) is applied in varying concentrations confirms that EGF enhances the rate of scratch closure and that this stimulation is driven by an increase in D and λ, whereas K is relatively unaffected by EGF. Conclusions: Our approach for estimating D, λ and K from an IncuCyte ZOOM™ assay provides more detail about cellular-level behaviour than standard methods for analysing these assays. In particular, our approach can be used to quantify the balance of cell migration and cell proliferation and, as we demonstrate, allow us to quantify how the addition of growth factors affects these processes individually.