Choosing and using diversity indices: Insights for ecological applications from the German Biodiversity Exploratories

Biodiversity, a multidimensional property of natural systems, is difficult to quantify partly because of the multitude of indices proposed for this purpose. Indices aim to describe general properties of communities that allow us to compare different regions, taxa, and trophic levels. Therefore, they are of fundamental importance for environmental monitoring and conservation, although there is no consensus about which indices are more appropriate and informative. We tested several common diversity indices in a range of simple to complex statistical analyses in order to determine whether some were better suited for certain analyses than others. We used data collected around the focal plant Plantago lanceolata on 60 temperate grassland plots embedded in an agricultural landscape to explore relationships between the common diversity indices of species richness (S), Shannon's diversity (H'), Simpson's diversity (D1), Simpson's dominance (D2), Simpson's evenness (E), and Berger–Parker dominance (BP). We calculated each of these indices for herbaceous plants, arbuscular mycorrhizal fungi, aboveground arthropods, belowground insect larvae, and P. lanceolata molecular and chemical diversity. Including these trait-based measures of diversity allowed us to test whether or not they behaved similarly to the better studied species diversity. We used path analysis to determine whether compound indices detected more relationships between diversities of different organisms and traits than more basic indices. In the path models, more paths were significant when using H', even though all models except that with E were equally reliable. This demonstrates that while common diversity indices may appear interchangeable in simple analyses, when considering complex interactions, the choice of index can profoundly alter the interpretation of results. Data mining in order to identify the index producing the most significant results should be avoided, but simultaneously considering analyses using multiple indices can provide greater insight into the interactions in a system.

Detecting local adaptation in widespread grassland species - the importance of scale and local plant community

1 Adaptation of plant populations to local environments has been shown in many species but local adaptation is not always apparent and spatial scales of differentiation are not well known. In a reciprocal transplant experiment we tested whether: (i) three widespread grassland species are locally adapted at a European scale; (ii) detection of local adaptation depends on competition with the local plant community; and (iii) local differentiation between neighbouring populations from contrasting habitats can be stronger than differentiation at a European scale. 2 Seeds of Holcus lanatus, Lotus corniculatus and Plantago lanceolata from a Swiss, Czech and UK population were sown in a reciprocal transplant experiment at fields that exhibit environmental conditions similar to the source sites. Seedling emergence, survival, growth and reproduction were recorded for two consecutive years. 3 The effect of competition was tested by comparing individuals in weeded monocultures with plants sown together with species from the local grassland community. To compare large-scale vs. small-scale differentiation, a neighbouring population from a contrasting habitat (wet-dry contrast) was compared with the 'home' and 'foreign' populations. 4 In P. lanceolata and H. lanatus, a significant home-site advantage was detected in fitness-related traits, thus indicating local adaptation. In L. corniculatus, an overall superiority of one provenance was found. 5 The detection of local adaptation depended on competition with the local plant community. In the absence of competition the home-site advantage was underestimated in P. lanceolata and overestimated in H. lanatus. 6 A significant population differentiation between contrasting local habitats was found. In some traits, this small-scale was greater than large-scale differentiation between countries. 7 Our results indicate that local adaptation in real plant communities cannot necessarily be predicted from plants grown in weeded monocultures and that tests on the relationship between fitness and geographical distance have to account for habitat-dependent small-scale differentiation. Considering the strong small-scale differentiation, a local provenance from a different habitat may not be the best choice in ecological restoration if distant populations from a more similar habitat are available.

Potential contribution of natural enemies to patterns of local adaptation in plants

Genetic differentiation among plant populations and adaptation to local environmental conditions are well documented. However, few studies have examined the potential contribution of plant antagonists, such as insect herbivores and pathogens, to the pattern of local adaptation. Here, a reciprocal transplant experiment was set up at three sites across Europe using two common plant species, Holcus lanatus and Plantago lanceolata. The amount of damage by the main above-ground plant antagonists was measured: a rust fungus infecting Holcus and a specialist beetle feeding on Plantago, both in low-density monoculture plots and in competition with interspecific neighbours. Strong genetic differentiation among provenances in the amount of damage by antagonists in both species was found. Local provenances of Holcus had significantly higher amounts of rust infection than foreign provenances, whereas local provenances of Plantago were significantly less damaged by the specialist beetle than the foreign provenances. The presence of surrounding vegetation affected the amount of damage but had little influence on the ranking of plant provenances. The opposite pattern of population differentiation in resistance to local antagonists in the two species suggests that it will be difficult to predict the consequences of plant translocations for interactions with organisms of higher trophic levels.

The inclusion of forage mixtures in the diet of growing dairy heifers: impacts on digestion, energy utilisation, and methane emissions

Intensive farming focusing on monoculture grass species to maximise forage production has led to a reduction in the extent and diversity of species-rich grasslands. However, plant communities with higher species number (richness) are a potential strategy for more sustainable production and mitigation of greenhouse gas (GHG) emissions. Research has indicated the need to understand opportunities that forage mixtures can offer sustainable ruminant production systems. The objective of the two experiments reported here were to evaluate multiple species forage mixtures in comparison to ryegrass-dominant pasture, when conserved or grazed, on digestion, energy utilisation, N excretion, and methane emissions by growing 10–15 month old heifers. Experiment 1 was a 4 × 4 Latin square design with five week periods. Four forage treatments of: (1) ryegrass (control); permanent pasture with perennial ryegrass (Lolium perenne); (2) clover; a ryegrass:red clover (Trifolium pratense) mixture; (3) trefoil; a ryegrass:birdsfoot trefoil (Lotus corniculatus) mixture; and (4) flowers; a ryegrass:wild flower mixture of predominately sorrel (Rumex acetosa), ox-eye daisy (Leucanthemum vulgare), yarrow (Achillea millefolium), knapweed (Centaurea nigra) and ribwort plantain (Plantago lanceolata), were fed as haylages to four dairy heifers. Measurements included digestibility, N excretion, and energy utilisation (including methane emissions measured in respiration chambers). Experiment 2 used 12 different dairy heifers grazing three of the same forage treatments used to make haylage in experiment 1 (ryegrass, clover and flowers) and methane emissions were estimated using the sulphur hexafluoride (SF6) tracer technique. Distribution of ryegrass to other species (dry matter (DM) basis) was approximately 70:30 (clover), 80:20 (trefoil), and 40:60 (flowers) for experiment 1. During the first and second grazing rotations (respectively) in experiment 2, perennial ryegrass accounted for 95 and 98% of DM in ryegrass, and 84 and 52% of DM in clover, with red clover accounting for almost all of the remainder. In the flowers mixture, perennial ryegrass was 52% of the DM in the first grazing rotation and only 30% in the second, with a variety of other flower species occupying the remainder. Across both experiments, compared to the forage mixtures (clover, trefoil and flowers), ryegrass had a higher crude protein (CP) content (P < 0.001, 187 vs. 115 g kg −1 DM) and DM intake (P < 0.05, 9.0 vs. 8.1 kg day −1). Heifers in experiment 1 fed ryegrass, compared to the forage mixtures, had greater total tract digestibility (g kg −1) of DM (DMD; P < 0.008, 713 vs. 641) and CP (CPD, P < 0.001, 699 vs. 475), and used more intake energy (%) for body tissue deposition (P < 0.05, 2.6 vs. −4.9). For both experiments, heifers fed flowers differed the most compared to the ryegrass control for a number of measurements. Compared to ryegrass, flowers had 40% lower CP content (P < 0.001, 113 vs. 187 g kg −1), 18% lower DMD (P < 0.01, 585 vs. 713 g kg −1), 42% lower CPD (P < 0.001, 407 vs. 699 g kg −1), and 10% lower methane yield (P < 0.05, 22.6 vs. 25.1 g kg −1 DM intake). This study has shown inclusion of flowers in forage mixtures resulted in a lower CP concentration, digestibility and intake. These differences were due in part to sward management and maturity at harvest. Further research is needed to determine how best to exploit the potential environmental benefits of forage mixtures in sustainable ruminant production systems.

Criptógamos do Parque Estadual das Fontes do Ipiranga, São Paulo, SP: algas, 25: Bacillariophyceae (Naviculales: Pinnulariaceae)

Levantamento dos representantes da família Pinnulariaceae (Naviculales, Bacillariophyceae) do Parque Estadual das Fontes do Ipiranga, São Paulo, Brasil. Foram identificados dois gêneros (Caloneis com 1 e Pinnularia com 12 espécies) e 20 táxons no total, distribuídos em 13 espécies e sete variedades não típicas de suas respectivas espécies. Uma variedade, Pinnularia brauniana (Grunow) Mills var. sanctipaulensis Rocha, é descrita como nova para a ciência. Pinnularia brauniana (Grunow) Mills var. sanctipaulensis Rocha e P. subgibba Krammer var. lanceolata Gaiser & Johanser são, geograficamente, as espécies mais bem distribuídas no PEFI por ocorrerem em 5 localidades cada; e Caloneis hyalina Hustedt, Pinnularia biceps Gregory var. biceps, P. grunowii Krammer, P. joculata (Manguin) Krammer, P. schoenfelderi Krammer, P. subanglica Krammer, P. tabellaria Ehrenberg e P. viridis (Nitzsch) Ehrenberg var. viridis as menos bem representadas, por ocorrerem em uma localidade apenas cada uma.

Caracterização morfológica e citogenética de sementes e plântulas de algumas espécies de plantas tóxicas

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Hematologia como ferramenta no monitoramento do "status" da cadeia produtiva de oito espécies de Acaris ornamentais (Loricariidae) do médio Rio Guamá, estado do Pará

O presente trabalho monitorou a saúde de oito espécies de acaris ornamentais capturados e comercializados no Médio Rio Guamá - Pará, através do estabelecimento do quadro hematológico basal, avaliação de estresse de transporte e de infecção por Trypanosoma spp. São elas: ancistrus (Ancistrus sp. - L338), loricaia (Rineloricaia lanceolata - L10), picoto (Hypostomus sp. - L28), bola (Peckoltia oligospila - L06), pleco (Cochilodon sp. - L145), canoa (Lasiancistrus saetiger - L323), assacu (Pseudacanthicus spinosus - L160) e pinima (Leporacanthicus galaxias - L07). As coletas sanguíneas para a determinação do quadro hematológico basal (Capítulos I e II) foram realizadas ainda no local da captura dos peixes, sob o mínimo de estresse possível. Separarou-se as amostras sanguíneas não infectadas para possibilitar comparações com as do após-estresse de transporte (Capítulos III e IV) e também com as infectados por Trypanosoma spp. (Capítulo V). O estresse de transporte estabelecido durou 3h, com densidade de 1,5 peixe/L, simulando o processo de comercialização dos peixes na região e foi avaliado após 0, 6, 24, 48, 72 e 96h. Nos Capítulos I e II, observou-se que o hemograma basal apresentou diferença significativa (p>0,05) entre os as sete espécies de acaris, apesar de estas pertencerem a mesma família e compartilharem nichos ecológicos semelhantes. O estresse de transporte por 3h (Capítulos III e IV) não comprometeu a saúde dos acaris, pois a maioria dos parâmetros hematológicos retornou aos níveis basais em 24h em bola, em 48h em pleco e em 72h em picoto, sendo estes, respectivamente, os períodos mínimos indicados para a aclimatação destes peixes antes de uma nova comercialização. Todas as oito espécies de acaris estudadas estavam infectadas por Tryopanosoma spp. (Capítulo V). Encontrou-se anemia normocítica-hipocrômica em ancistrus e canoa, e anemia macrocítica-hipocrômica em loricaia. Pinimas infectados apresentaram quadro de estresse com linfocitopenia, neutrofilia e monocitose. Assim, os resultados deste ensaio proporcionaram a avaliação da higidez destas espécies de acaris ornamentais através de exames hematológicos, podendo assim subsidiar o desenvolvimento ou a adequação do manejo menos estressante para estes peixes, de forma a auxiliar a sustentabilidade da cadeia extrativista das espécies ornamentais.

Morphological and hematological studies of Trypanosoma spp. infecting ornamental armored catfish from Guamá River-PA, Brazil

Um total de 281 espécimes de peixes ornamentais de água doce - das espécies Leporacanthicus galaxias, Lasiancistrus saetiger, Cochliodon sp., Hypostomus sp., Pseudacanthicus spinosus, Ancistrus sp. e Rineloricaria cf. lanceolata - foram capturados na bacia hidrográfica do rio Guamá, Pará, Brasil. A infecção por Trypanosoma spp. foi inspecionada. A caracterização morfológica e morfométrica dos parasitas e os parâmetros hematológicos foram determinados. Todas as espécies foram infectadas e todos os espécimes de Leporacanthicus galaxias e Pseudacanthicus spinosus estavam parasitados. As outras espécies mostraram uma prevalência variável da infecção. Os parasitas mostraram claramente morfotipos e dimensões diferentes, e provavelmente, pertencem a espécies diferentes. A resposta hematológica à infecção variou de acordo com o hospedeiro. Em Cochliodon sp. não houve diferença entre peixes infectados e não infectados. Em outras espécies diversas modificações em alguns parâmetros hematológicos foram encontrados, mas aparentemente sem causar doença. Ressalta-se a possibilidade de introdução de parasitas em novos ambientes devido aos movimentos artificiais destes peixes ornamentais.

Avaliação comparativa das perdas de água por evapotranspiração em mesocosmos colonizados por diferentes macrófitas aquáticas

Water loss increase through evapotranspiration is one the most important modes of interference of weeds in water bodies, especially in water storage reservoirs. Thus, this research was conducted to compare the water losses in mesocosms colonized with the aquatic weeds Myriophyllum aquaticum,Brachiaria subquadripara,Echinochloa polystachya,Typha latifolia and Pontederia lanceolata. The evaluations were carried out in July 2004, in three 4-day periods. The water losses were evaluated based on the amounts of water necessary to restore the existing water level before each evaluation period. The colonization of the aquatic weeds increased the water losses in the mesocosms, with the highest losses being observed in those colonized by T. latifolia, between 3.54 to 4.71 times the water surface without aquatic weeds. The losses in the mesocosms colonized by M. aquaticum,B. subquadripara, E. polystachya, and P. lanceolata were statistically similar and promoted increases between 1.54 to 2.21 times the free surface. The results showed that aquatic weed control is important to prevent water losses in reservoirs used for water storage.

Toxicidade de produtos naturais para operárias de Atta sexdens rubropilosa Forel (Hymenoptera: Formicidae)

As formigas cortadeiras, pertencentes aos gêneros Atta e Acromyrmex, possuem esse nome pelo hábito que têm de cortar as folhas das plantas. Por este motivo, elas causam danos econômicos, principalmente em áreas de cultura agrícola. Para realizar o controle dessas pragas, existem inúmeros métodos; porém, os únicos que apresentam resultados satisfatórios são os que utilizam inseticidas tradicionais. O controle químico pode gerar efeitos maléficos ao ambiente, à fauna e à população humana. É por isso que há uma grande procura por métodos alternativos, utilizando produtos que tenham grande especificidade e sejam passíveis de rápida degradação, sendo, portanto, menos danosos ao ambiente. Uma destas alternativas é a utilização de produtos naturais presentes nos vegetais superiores, que podem constituir novas fontes de material com ação tóxica para estes insetos praga. Este trabalho teve por objetivo avaliar a toxicidade das plantas Magonia pubescens e Duguetia lanceolata para operárias de Atta sexdens rubropilosa. Para os testes, as formigas foram divididas em lotes de 50 operárias, distribuídas em 5 placas para cada tratamento e mantidas em B.O.D. durante os 25 dias do experimento. Nos bioensaios de ingestão, os extratos provenientes das plantas foram incorporados em dieta artificial e testados durante 25 dias. No bioensaio tópico, as substâncias eram colocadas no pronoto das formigas e era oferecida dieta pura em todos os dias do experimento. Após os testes, os dados foram transferidos para o software Prisma 3.0, para a confecção de curvas de sobrevivência e para a realização das análises estatísticas. Apesar de Magonia pubescens apresentar um bom resultado, não foi possível continuar com os testes, pois a alta polaridade dos extratos impossibilitava a separação das substâncias... (Resumo completo, clicar acesso eletrônico abaixo)

Composição química e atividade biológica de espécies de nectandra e stevia rebaudiana

Pós-graduação em Agronomia (Horticultura) - FCA

Androecia in two Clusia species: development, structure and resin secretion

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

A new HPLC-DAD-MS/MS method for the simultaneous determination of major compounds in the crude extract of Lychnophora salicifolia Mart. (Brazilian arnicao) leaves: Application to chemical variability evaluation

Lychnophora salicifolia Mart., which occurs in the Brazilian Cerrado in the states of Bahia and Minas Gerais as well as in the southeast of the state of Goias, is the most widely distributed and also the most polymorphic species of the genus. This plant is popularly known to have anti-inflammatory and analgesic activities. In this work, we have studied the variation in terms of polar metabolites of ninety-three Lychnophora salicifolia Mart, specimens collected from different regions of the Brazilian Cerrado. Identification of the constituents of this mixture was carried out by analysis of the UV spectra and MS data after chromatographic separation. Twenty substances were identified, including chlorogenic acid derivatives, a flavonoid C-glucoside, and other sesquiterpenes. The analytical method was validated, and the reliability and credibility of the results was ensured for the purposes of this study. The concentration range required for analysis of content variability within the analyzed group of specimens was covered with appropriate values of limits of detection and quantitation, as well as satisfactory precision and recovery. A quantitative variability was observed among specimens collected from the same location, but on average they were similar from a chemical viewpoint. In relation to the study involving specimens from different locations, there were both qualitative and quantitative differences among plants collected from different regions of Brazil. Statistical analysis revealed that there is a correlation between geographical localization and polar metabolites profile for specimens collected from different locations. This is evidence that the pattern of metabolites concentration depends on the geographical distribution of the specimens. (C) 2012 Elsevier B.V. All rights reserved.

SEASONAL VARIATION OF THE MAJOR SECONDARY METABOLITES PRESENT IN THE EXTRACT OF Eremanthus mattogrossensis Less (Asteraceae: Vernonieae) LEAVES

The species Eremanthus mattogrossensis, known as "veludo do cerrado" (cerrado velvet), is native to the Brazilian Cerrado. Because the amount of metabolites present in plants may be influenced by biological and environmental factors, here we conducted an HPLC-DAD-MS/MS investigation of the metabolite concentrations found in the MeOH/H2O extract of the leaves of this species. The main compounds were identified and quantified, and the metabolites were grouped by chemical class (caffeoylquinic acids, flavonoids, and sesquiterpene lactone). Statistical analysis indicated a straight correlation between the quantity of metabolites and seasonality, suggesting that environmental properties elicit important metabolic responses.

Stenodactilina e lanceolina: due nuove potenti “ribosome-inactivating proteins” bicatenarie. Purificazione, caratterizzazione chimico-fisica e studio dei meccanismi citotossici

Two lectins, called lanceolin and stenodactylin, were purified by affinity chromatography on CL Sepharose 6B from the caudices of the Passifloraceae Adenia lanceolata and Adenia stenodactyla, respectively. They are glycoproteins with Mw of 61,243 (lanceolin) and 63,131 daltons (stenodactylin), consisting of an enzymatic A chain linked to a larger B chain with lectin properties, with N-terminal amino acid sequences similar to that of volkensin, the toxic lectin from Adenia volkensii. These two lectins agglutinate red blood cells, inhibit protein synthesis in a cell-free system as well as in whole cells, and depurinate ribosomes and DNA, but not tRNA or poly(A). They are highly toxic to cells, in which they induce apoptosis and strongly inhibit protein synthesis, and to mice, with LD50s 8.16 mg/kg (lanceolin) and 2.76 mg/kg (stenodactylin) at 48 hours after administration. Thus, lanceolin and stenodactylin have all the properties of the toxic type 2 ribosomeinactivating proteins (RIPs). Further experiments were conducted in order to clarify the effects of these RIPs in cells. We investigated the cronological relationship between cytotoxic activity, indirectly evaluated as inhibition of protein synthesis, and loss of cell viability in NB100 cell line. The induction of apoptosis was assessed by determining caspases 3 and 7 levels, which increase 8-16 hours earlier than the beginning of protein synthesis inhibition. This suggest that the arrest of protein synthesis is not a central event in the pathway of cell poisoning by RIPs. The high toxicity and the induction of cell death only by apoptosis and not by necrosis in two muscular cell lines (TE671 and RD/18) suggest that lanceolin and stenodactylin may be potential candidates for experimental chemoablation in strabism and blepharospasm. These results show that lanceolin and stenodactylin are amongst the most potent toxins of plant origin.