Incidência e caracterização dos vírus infectando orquídeas no Estado de São Paulo

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Controle de viroses em alface por meio de métodos integrados de manejo da cultura

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Co-infecção vírus da imunodeficiência humana e vírus da hepatite C (HIV/HCV): aspectos epidemiológicos, clínicos e laboratoriais de uma população atendida em um serviço de hepatopatias na cidade de Belém-Pará

A infecção pelo Vírus da imunodeficiência humana 1 (HIV -1) em associação com a do Vírus da hepatite C (HCV) representa, atualmente, uma comorbidade que pode interferir principalmente na história natural da hepatite C. Este trabalho tem como objetivo descrever aspectos demográfico, clínico e laboratorial, incluindo exame histopatológico de pacientes coinfectados HIV/RCV. No período de agosto de 2004 a dezembro de 2006, 36 pacientes coinfectados, foram selecionados para o estudo. Noventa e dois por cento desses pacientes eram procedentes de Belém, com média de idade de 42 anos. Entre as principais informações demográficas da população estudada, foram identificados 72,52% solteiros, 83,5% do sexo masculino e 61,1% relataram ser heterossexuais. Entre os fatores de risco para o HCV o uso de drogas ilícitas injetáveis foi identificado em 41,7% dos casos, o uso de cocaína intranasal foi relatado por 38,9% dos pacientes, e o compartilhamento de seringas e material pessoal, em 38,9% dos casos. A história de etilismo em 77,8% e o uso de TARV foram os possíveis fatores agravantes mais frequentes para a doença hepática. Apenas um paciente apresentou sinais clínicos de insuficiência hepática crônica. Entre os testes bioquímicos hepáticos, a mediana de ALT e AST foi de 68UI/L e 61UI/L, respectivamente. Os níveis de linfócitos T CD4+ apresentaram mediana de 327 células/mm³, a carga viral do HIV com mediana de 2,53 logl0 cópias/mL (ep=0,34), carga viral do HCV com mediana de 5,9 log10UI/mL. O genótipo 1 do HCV foi o mais frequente (58,82%). Cinqüenta e sete por cento dos pacientes submetidos à biópsia hepática apresentavam fibrose de moderada a severa, e 11% não apresentaram fibrose pela classificação MET AVIR. Houve associação entre níveis de linfócitos T CD4+ e níveis de ALT e de AST (p=0,0009 e p=0,0002, respectivamente), assim como associação entre genótipo 1 do HCV e HCV-RNA maior ou igual a 6 log10 UI/mL (p=0.0039). Foi observada também associação entre HCV-RNA e HIV-RNA (p=0,039). Os pacientes apresentam estado geral bom, imunologicamente estáveis, sem sinais de descompensação hepática, mas com alterações estruturais hepáticas importantes, sendo portanto bons candidatos à terapia antiviral para o HCV. Futuros estudos, talvez de caso controle, com casuística maior são necessários para melhor entendimento da co-infecção HIV/HCV.

Caracterização parcial e desenvolvimento de oligonucleotídeos específicos para detecção de sequivírus infectando alface

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Tobamovírus em Capsicum spp. no Estado de São Paulo: ocorrência, análise da variabilidade e avaliação de resistência

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Receptor tipo quinase de tomate: caracterização molecular e implicações nas infecções virais

Pós-graduação em Ciências Biológicas (Genética) - IBB

Expressão, purificação e caracterização de proteínas dos fitovírus SBMV e RSPaV

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Immunohistochemical approach to the pathogenesis of clinical cases of bovine Herpesvirus type 5 infections

Meningoencephalitis by Herpesvirus type 5 (BoHV-5) in cattle has some features that are similar to those of herpetic encephalitis in humans and other animal species. Human Herpesvirus 3 (commonly known as Varicella-zoster virus 1), herpes simplex viruses (HSV), and equid Herpesvirus 1 (EHV-1) induce an intense inflammatory, vascular and cellular response. In spite of the many reports describing the histological lesions associated with natural and experimental infections, the immunopathological mechanisms for the development of neurological disorder have not been established. A total of twenty calf brains were selected from the Veterinary School, University of São Paulo State, Araçatuba, Brazil, after confirmation of BoHV-5 infection by virus isolation as well as by a molecular approach. The first part of the study characterized the microscopic lesions associated with the brain areas in the central nervous system (CNS) that tested positive in a viral US9 gene hybridization assay. The frontal cortex (Fc), parietal cortex (Pc), thalamus (T) and mesencephalon (M) were studied. Secondly, distinct pathogenesis mechanisms that take place in acute cases were investigated by an immunohistochemistry assay. This study found the frontal cortex to be the main region where intense oxidative stress phenomena (AOP-1) and synaptic protein expression (SNAP-25) were closely related to inflammatory cuffs, satellitosis and gliosis, which represent the most frequently observed neurological lesions. Moreover, MMP-9 expression was shown to be localized in the leptomeninges, in the parenchyma and around mononuclear infiltrates (p < 0.0001). These data open a new perspective in understanding the role of the AOP-1, MMP-9 and SNAP-25 proteins in mediating BoHV-5 pathogenesis and the strategies of host-virus interaction in order to invade the CNS.

What can light scattering spectroscopy do for membrane-active peptide studies

Highly charged peptides are important components of the immune system and belong to an important family of antibiotics. Although their therapeutic activity is known, most of the molecular level mechanisms are controversial. A wide variety of different approaches are usually applied to understand their mechanisms, but light scattering techniques are frequently overlooked. Yet, light scattering is a noninvasive technique that allows insights both on the peptide mechanism of action as well as on the development of new antibiotics. Dynamic light scattering (DLS) and static light scattering (SLS) are used to measure the aggregation process of lipid vesicles upon addition of peptides and molecular properties (shape, molecular weight). The high charge of these peptides allows electrostatic attraction toward charged lipid vesicles, which is studied by zeta potential (zeta-potential) measurements. Copyright (c) 2008 European Peptide Society and John Wiley & Sons, Ltd.

SEASONALITY OF VIRAL RESPIRATORY INFECTIONS IN SOUTHEAST OF BRAZIL: THE INFLUENCE OF TEMPERATURE AND AIR HUMIDITY

Viruses are the major cause of lower respiratory tract infections in childhood and the main viruses involved are Human Respiratory Syncytial Virus (HRSV), Human Metapneumovirus (HMPV), Influenzavirus A and B (FLUA and FLUB), Human Parainfluenza Virus 1, 2 and 3 (HPIV1, 2 and 3) and Human Rhinovirus (HRV). The purposes of this study were to detect respiratory viruses in hospitalized children younger than six years and identify the influence of temperature and relative air humidity on the detected viruses. Samples of nasopharyngeal washes were collected from hospitalized children between May/2004 and September/2005. Methods of viral detection were RT-PCR, PCR and HRV amplicons were confirmed by hybridization. Results showed 54% (148/272) of viral positivity. HRSV was detected in 29% (79/272) of the samples; HRV in 23.1% (63/272); HPIV3 in 5.1% (14/272); HMPV in 3.3% (9/272); HPIV1 in 2.9% (8/272); FLUB in 1.4% (4/272), FLUA in 1.1% (3/272), and HPIV2 in 0.3% (1/272). The highest detection rates occurred mainly in the spring 2004 and in the autumn 2005. It was observed that viral respiratory infections tend to increase as the relative air humidity decreases, showing significant association with monthly averages of minimal temperature and minimal relative air humidity. In conclusion, viral respiratory infections vary according to temperature and relative air humidity and viral respiratory infections present major incidences it coldest and driest periods.

Seasonality of viral respiratory infections in Southeast of Brazil: the influence of temperature and air humidity

Viruses are the major cause of lower respiratory tract infections in childhood and the main viruses involved are Human Respiratory Syncytial Virus (HRSV), Human Metapneumovirus (HMPV), Influenzavirus A and B (FLUA and FLUB), Human Parainfluenza Virus 1, 2 and 3 (HPIV1, 2 and 3) and Human Rhinovirus (HRV). The purposes of this study were to detect respiratory viruses in hospitalized children younger than six years and identify the influence of temperature and relative air humidity on the detected viruses. Samples of nasopharyngeal washes were collected from hospitalized children between May/2004 and September/2005. Methods of viral detection were RT-PCR, PCR and HRV amplicons were confirmed by hybridization. Results showed 54% (148/272) of viral positivity. HRSV was detected in 29% (79/272) of the samples; HRV in 23.1% (63/272); HPIV3 in 5.1% (14/272); HMPV in 3.3% (9/272); HPIV1 in 2.9% (8/272); FLUB in 1.4% (4/272), FLUA in 1.1% (3/272), and HPIV2 in 0.3% (1/272). The highest detection rates occurred mainly in the spring 2004 and in the autumn 2005. It was observed that viral respiratory infections tend to increase as the relative air humidity decreases, showing significant association with monthly averages of minimal temperature and minimal relative air humidity. In conclusion, viral respiratory infections vary according to temperature and relative air humidity and viral respiratory infections present major incidences it coldest and driest periods.

A single chain antibody against a viral RNA polymerase (TBSV-BS3-Statice)

Expression of antibodies in plant against essential viral proteins could provide an alternative approach to engineered viral resistance. Engineered single chain Fv antibodies scFV are particularly suitable for expression in plant because of their small size and the lack of assembly requirements. RNA-dependent RNA polymerases (RdRps) function as the catalytic subunit of viral replicases required for the replication of all positive strand RNA viruses. By using Phage technology we selected scFvs from a phage library using purified E.coli expressed TBSV(Tomato bushy stunt virus) replicase as antigen. The scFvs mediated-inhibition of RdRp activity was studied in vitro and in planta. In vitro experiments showed the inhibition of CNV(Cucumber necrosis virus) and TCV(Turnip crinkle virus) RdRp. Transient in planta assays based on agroinfiltration and an infectious clone of TBSV demonstrated the inhibition of the replication of TBSV(Tomato bushy stunt virus). Epitope mapping showed that the selected scFvs target the motif E of RdRp which is involved in template binding.Moreover T1 plants of transgenic lines of N. benthamiana expressing different scFvs either in the cytoplasm or the ER (endoplasmic reticulum) showed a high level of resistance against infection with TBSV and RCNMV(Red clover necrotic mosaic virus) upon inoculation with virus particles. This is the first report that scFvs against a RdRp of a plant viruses can inhibit viral replication in vivo. The resistance is even efficient against viruses belonging to different virus families.

Etablierung von Expressionsystemen für Gene der Indolalkaloid-Biosynthese unter besonderer Berücksichtigung von Cytochrom P450-Enzymen

Etablierung von Expressionsystemen für Gene der Indolalkaloid-Biosynthese unter besonderer Berücksichtigung von Cytochrom P450-Enzymen In der vorliegenden Arbeit wurden Enzyme aus der Arzneipflanze Rauvolfia serpentina bearbeitet. Es wurde versucht, das an der Biosynthese des Alkaloids Ajmalin beteiligte Cytochrom P450-Enzym Vinorin-Hydroxylase heterolog und funktionell zu exprimieren. Ein zunächst unvollständiger, unbekannter Cytochrom P450-Klon konnte komplettiert und eindeutig mittels heterologer Expression in sf9-Insektenzellen als Cinnamoyl-Hydroxylase identifiziert werden. Die Tauglichkeit des Insektenzellsystems für die Untersuchung der Vinorin-Hydroxylase ist auf Grund der deacetylierenden Wirkung der Insektenzellen auf das Substrat Vinorin nicht gegeben. Im Rahmen des Homology Cloning Projektes konnten mehrere Volllängenklone und diverse Teilsequenzen von neuen Cytochrom P450-Klonen ermittelt werden. Ausserdem wurde durch das unspezifische Binden eines degenerierten Primers ein zusätzlicher Klon gefunden, der der Gruppe der löslichen Reduktasen zugeordnet werden konnte. Diese putative Reduktase wurde auf die Aktivität von mehreren Schlüsselenzymen der Ajmalin-Biosynthese durch heterologe Expression in E.coli und anschliessende HPLC-gestützte Aktivitätstests ohne Erfolg geprüft. Bedingt durch die Untauglichkeit des Insektenzellsystems für die Identifizierung der Vinorin-Hydroxylase, wurde ein neuartiges Modul-gestütztes, pflanzliches Expressionsystem etabliert, um vorhandene P450-Volllängenklone auf Vinorin- Hydroxylaseaktivität testen zu können. Die Funktionalität des Systems konnte durch die heterologe Expression der Polyneuridinaldehyd Esterase bestätigt werden. Trotzdem war es bis jetzt nicht möglich, die Cinnamoyl-Hydroxylase als Kontrollenzym für das pflanzliche System oder aber die gesuchte Vinorin- Hydroxylase in aktiver Form zu exprimieren.

Twelve years' detection of respiratory viruses by immunofluorescence in hospitalised children: impact of the introduction of a new respiratory picornavirus assay

Background Direct immunofluorescence assays (DFA) are a rapid and inexpensive method for the detection of respiratory viruses and may therefore be used for surveillance. Few epidemiological studies have been published based solely on DFA and none included respiratory picornaviruses and human metapneumovirus (hMPV). We wished to evaluate the use of DFA for epidemiological studies with a long-term observation of respiratory viruses that includes both respiratory picornaviruses and hMPV. Methods Since 1998 all children hospitalized with respiratory illness at the University Hospital Bern have been screened with DFA for common respiratory viruses including adenovirus, respiratory syncytial virus (RSV), influenza A and B, and parainfluenza virus 1-3. In 2006 assays for respiratory picornaviruses and hMPV were added. Here we describe the epidemiological pattern for these respiratory viruses detected by DFA in 10'629 nasopharyngeal aspirates collected from 8'285 patients during a 12-year period (1998-2010). Results Addition of assays for respiratory picornaviruses and hMPV raised the proportion of positive DFA results from 35% to 58% (p < 0.0001). Respiratory picornaviruses were the most common viruses detected among patients ≥1 year old. The seasonal patterns and age distribution for the studied viruses agreed well with those reported in the literature. In 2010, an hMPV epidemic of unexpected size was observed. Conclusions DFA is a valid, rapid, flexible and inexpensive method. The addition of assays for respiratory picornaviruses and hMPV broadens its range of viral detection. DFA is, even in the "PCR era", a particularly adapted method for the long term surveillance of respiratory viruses in a pediatric population.

[Infectious bovine rhinotracheitis (IBR) in the canton of Jura: an epidemiological outbreak investigation]

Following an abortion in a beef herd in the summer of 2009, three outbreaks of infectious bovine rhinotracheitis (IBR) were diagnosed in the cantons of Jura and Neuchatel. An epidemiological outbreak investigation was conducted with the aims to identify the source of introduction of the bovine herpes virus 1 (BoHV-1) into the affected herds and to prevent further spread of the disease. The attack rates in the three outbreak farms were 0.89, 0.28 and 0, respectively. BoHV-1 could be isolated from nasal swabs of two animals originating from one of the affected farms. Comparative restriction enzyme analysis revealed slight differences between the isolates of the two animals, but a high similarity to previous BoHV-1 isolates from the canton of Jura, as well as to a French BoHV-1 isolate. This IBR outbreak has shown the importance of reporting and analyzing abortions. The current disease outbreaks recall the main risk factors for the spread of IBR in Switzerland: purchase and movement of bovines and semen of often unknown IBR status.