Complex rearrangements in patients with duplications of MECP2 can occur by fork stalling and template switching

Duplication at the Xq28 band including the MECP2 gene is one of the most common genomic rearrangements identified in neurodevelopmentally delayed males. Such duplications are non-recurrent and can be generated by a non-homologous end joining (NHEJ) mechanism. We investigated the potential mechanisms for MECP2 duplication and examined whether genomic architectural features may play a role in their origin using a custom designed 4-Mb tiling-path oligonucleotide array CGH assay. Each of the 30 patients analyzed showed a unique duplication varying in size from similar to 250 kb to similar to 2.6 Mb. Interestingly, in 77% of these non-recurrent duplications, the distal breakpoints grouped within a 215 kb genomic interval, located 47 kb telomeric to the MECP2 gene. The genomic architecture of this region contains both direct and inverted low-copy repeat (LCR) sequences; this same region undergoes polymorphic structural variation in the general population. Array CGH revealed complex rearrangements in eight patients; in six patients the duplication contained an embedded triplicated segment, and in the other two, stretches of non-duplicated sequences occurred within the duplicated region. Breakpoint junction sequencing was achieved in four duplications and identified an inversion in one patient, demonstrating further complexity. We propose that the presence of LCRs in the vicinity of the MECP2 gene may generate an unstable DNA structure that can induce DNA strand lesions, such as a collapsed fork, and facilitate a Fork Stalling and Template Switching event producing the complex rearrangements involving MECP2.

The Autoimmune Regulator (AIRE), Which Is Defective in Autoimmune Polyendocrinopathy-Candidiasis-Ectodermal Dystrophy Patients, Is Expressed in Human Epidermal and Follicular Keratinocytes and Associates With the Intermediate Filament Protein Cytokeratin 17

Autoimmune polyendocrinopathy-candidiasis-ectodermal dystrophy (APECED) syndrome, which is caused by mutation of the autoimmune regulator (AIRE) gene, is a highly variable disease characterized by multiple endocrine failure, chronic mucocutaneous candidiasis, and various ectodermal defects. AIRE is a transcriptional regulator classically expressed in medullary thymic epithelial cells, monocytes, macrophages, and dendritic cells. Previous studies have suggested that AIRE can shuttle between the nucleus and cytoplasm of cells, although its cytoplasmic functions are poorly characterized. Through mass spectrometry analysis of proteins co-immunoprecipitating with cytoplasmic AIRE, we identified a novel association of AIRE with the intermediate filament protein cytokeratin 17 (K17) in the THP-1 monocyte cell line. We confirmed AIRE expression in HaCaT epidermal keratinocytes, as well as its interaction with K17. Confocal microscopy of human fetal and adult scalp hair follicles demonstrated a cytoplasmic pattern of AIRE staining that moderately colocalized with K17. The cytoplasmic association of AIRE with the intermediate filament network in human epidermal and follicular keratinocytes may provide a new path to understanding the ectodermal abnormalities associated with the APECED syndrome. (Am J Pathol 2011, 178:983-988; DOI: 10.1016/j.ajpath.2010.12.007)

Notes on beta-deformations of the pure spinor superstring in AdS(5) x S(5)

We study the properties of the vertex operator for the beta-deformation of the superstring in AdS(5) x S(5) in the pure spinor formalism. We discuss the action of supersymmetry on the infinitesimal beta-deformation, the application of the homological perturbation theory, and the relation between the worldsheet description and the spacetime supergravity description. (C) 2011 Elsevier B.V. All rights reserved.

Composition and antifungal activity against Candida albicans, Candida parapsilosis, Candida krusei and Cryptococcus neoformans of essential oils from leaves of Piper and Peperomia species

This study was addressed to investigate the composition and antifungal activity of essential oils from leaves of Piperaceae species (Piper aduncum, Piper amalago, Piper cernuum, Piper diospyrifolium, Piper crassinervium, Piper gaudichaudianum, Piper solmsianum, Piper regnellii, Piper tuberculatum, Piper umbelata and Peperomia obtusifolia) against Candida albicans, C. parapsilosis, C. krusei and Cryptococcus neoformans. The essential oils from P. aduncum, P. gaudichaudianum and P. solmsianum showed the highest antifungal activity against Cryptococcus neoformans with the MIC of 62.5, 62.5 and 3.9 mg.mL-1, respectively. The oil from P. gaudichaudianum showed activity against C. krusei with MIC of 31.25 mg.mL-1.

Group 11 (Cu, Ag, Au) promotion of 15%Co/Al(2)O(3) Fischer-Tropsch synthesis catalysts

Co/Al(2)O(3) Fischer-Tropsch synthesis catalysts promoted with different quantities of Group 11 metals (Cu, Ag, Au) were characterized and tested. The presence of relatively small quantities of such metals enhanced Co reducibility and, in the cases of Ag and Au, improved the surface Co metal active site densities. EXAFS experiments with the most loaded catalyst samples show that only Co-Co and Me-Me (Me = Cu, Ag and Au) coordination could be observed. This suggests that the greater fraction of the metals form different phases. However, the reduction promoting effect of the Group 11 metal is severely hampered once the catalyst receives a mild passivation treatment following primary reduction. An explanation in terms of promoter segregation during primary reduction is proposed. At lower promoter levels (0.83%Ag and 1.51%Au) and higher Ag levels (2.76%), significant gains in Co active site densities were achieved resulting in improved CO conversion levels relative to the unpromoted catalyst. Moreover, slight decreases in light product (e.g., CH(4)) selectivity and slight increases in C(5)+ selectivity were achieved. At high Au loading (5.05%), however, too much Au was loaded which, although significantly increasing the fraction of Co reduced, blocked Co surface sites and resulted in decreased Co conversion rates. While Cu facilitated Co reduction, the increased fraction of reduced Co did not translate to improved active site densities. It appears that a fraction of Cu tended to cover the rim of Co clusters, resulting in decreases in CO conversion rates and detrimental increases in light product selectivity. (C) 2009 Elsevier B.V. All rights reserved.

Influence of hardwood, softwoodand fractionated pulp in a stratifiedthree-layered fine paper : Lövved, barrved och fraktionerad massa ochdess inverkan på ett treskiktat finpapper

Four different trials of stratified three-layered fine paper, of sulphate pulp, were performed to investigate if stratified fine fraction or fibres from birch can improve the properties of a paper compared to a reference sheet. All trials had five different scenarios and each scenario was calendered with different linear load. All sheets had a grammage of 80 g/m2.In the first trial, the paper contained birch, pine and filler of calciumcarbonate (marble), and was manufactured with the pilot paper machine XPM and the stratified headbox Formator at RCF (Stora Enso Research Center in Falun). The furnish consisted of 75% birch and 25% pine.The second trial contained coated sheets with paper from trial one as the base paper. The coating slip contained calciumcarbonate and clay and the amount was approximately 10-12 g/m2.The third trial, also with birch and pine but without filler, was performed at STFI (Skogsindustrins Tekniska Forskningsinstitut in Stockholm) with the laboratory scaled paper machine StratEx and the stratified headbox AQ-vanes. The furnish consisted of 75% birch and 25% pine, except for one scenario which contained of 75% pine and 25% birch.The last trial contained fractionated pulp of birch and pine and was performed at STFI. 50% was fine fraction and 50% was coarse fraction.This test does not show any clear benefits of making stratified sheets of birch and pine when it comes to properties such as bending stiffness, tensile index and surface smoothness. The retention can be improved with birch in the surface plies. It is possible that the formation can be improved with birch in the surface plies and pine in the middle ply. It is also possible that fine fraction in the surface plies and coarse fraction in the middle ply can improve both surface smoothness and bending stiffness. The results in this test are shown with confidence intervals which points out the difficulties of analysing sheets manufactured with a pilot paper machine or a laboratory scaled paper machine.

Discrepancies in solar irradiation data for Stockholm and Athens

The aim of this study is to evaluate the variation of solar radiation data between different data sources that will be free and available at the Solar Energy Research Center (SERC). The comparison between data sources will be carried out for two locations: Stockholm, Sweden and Athens, Greece. For the desired locations, data is gathered for different tilt angles: 0°, 30°, 45°, 60° facing south. The full dataset is available in two excel files: “Stockholm annual irradiation” and “Athens annual irradiation”. The World Radiation Data Center (WRDC) is defined as a reference for the comparison with other dtaasets, because it has the highest time span recorded for Stockholm (1964–2010) and Athens (1964–1986), in form of average monthly irradiation, expressed in kWh/m2. The indicator defined for the data comparison is the estimated standard deviation. The mean biased error (MBE) and the root mean square error (RMSE) were also used as statistical indicators for the horizontal solar irradiation data. The variation in solar irradiation data is categorized in two categories: natural or inter-annual variability, due to different data sources and lastly due to different calculation models. The inter-annual variation for Stockholm is 140.4kWh/m2 or 14.4% and 124.3kWh/m2 or 8.0% for Athens. The estimated deviation for horizontal solar irradiation is 3.7% for Stockholm and 4.4% Athens. This estimated deviation is respectively equal to 4.5% and 3.6% for Stockholm and Athens at 30° tilt, 5.2% and 4.5% at 45° tilt, 5.9% and 7.0% at 60°. NASA’s SSE, SAM and RETScreen (respectively Satel-light) exhibited the highest deviation from WRDC’s data for Stockholm (respectively Athens). The essential source for variation is notably the difference in horizontal solar irradiation. The variation increases by 1-2% per degree of tilt, using different calculation models, as used in PVSYST and Meteonorm. The location and altitude of the data source did not directly influence the variation with the WRDC data. Further examination is suggested in order to improve the methodology of selecting the location; Examining the functional dependence of ground reflected radiation with ambient temperature; variation of ambient temperature and its impact on different solar energy systems; Im pact of variation in solar irradiation and ambient temperature on system output.

European Solar Engineering School ESES : Past and Future

The European Solar Engineering School ESES is a one-year masters program that started in 1999 at the Solar Energy Research Center SERC, Dalarna University College. It has been growing in popularity over the years, with over 20 students in the current year. Approximately half the students come from Europe, the rest coming from all over the globe. This paper described the contents and experiences from seven years of running the programme and the plans for adapting the programme to the Bologna process. The majority of the students from ESES have found work in the solar industry, energy industry or taken up PhD positions. An alumni group has been started that actively gives support to past, present and potential future students.

TCA Evaluation : Lab Measurements, Modelling and System Simulations

The study reported here is part of a large project for evaluation of the Thermo-Chemical Accumulator (TCA), a technology under development by the Swedish company ClimateWell AB. The studies concentrate on the use of the technology for comfort cooling. This report concentrates on measurements in the laboratory, modelling and system simulation. The TCA is a three-phase absorption heat pump that stores energy in the form of crystallised salt, in this case Lithium Chloride (LiCl) with water being the other substance. The process requires vacuum conditions as with standard absorption chillers using LiBr/water. Measurements were carried out in the laboratories at the Solar Energy Research Center SERC, at Högskolan Dalarna as well as at ClimateWell AB. The measurements at SERC were performed on a prototype version 7:1 and showed that this prototype had several problems resulting in poor and unreliable performance. The main results were that: there was significant corrosion leading to non-condensable gases that in turn caused very poor performance; unwanted crystallisation caused blockages as well as inconsistent behaviour; poor wetting of the heat exchangers resulted in relatively high temperature drops there. A measured thermal COP for cooling of 0.46 was found, which is significantly lower than the theoretical value. These findings resulted in a thorough redesign for the new prototype, called ClimateWell 10 (CW10), which was tested briefly by the authors at ClimateWell. The data collected here was not large, but enough to show that the machine worked consistently with no noticeable vacuum problems. It was also sufficient for identifying the main parameters in a simulation model developed for the TRNSYS simulation environment, but not enough to verify the model properly. This model was shown to be able to simulate the dynamic as well as static performance of the CW10, and was then used in a series of system simulations. A single system model was developed as the basis of the system simulations, consisting of a CW10 machine, 30 m2 flat plate solar collectors with backup boiler and an office with a design cooling load in Stockholm of 50 W/m2, resulting in a 7.5 kW design load for the 150 m2 floor area. Two base cases were defined based on this: one for Stockholm using a dry cooler with design cooling rate of 30 kW; one for Madrid with a cooling tower with design cooling rate of 34 kW. A number of parametric studies were performed based on these two base cases. These showed that the temperature lift is a limiting factor for cooling for higher ambient temperatures and for charging with fixed temperature source such as district heating. The simulated evacuated tube collector performs only marginally better than a good flat plate collector if considering the gross area, the margin being greater for larger solar fractions. For 30 m2 collector a solar faction of 49% and 67% were achieved for the Stockholm and Madrid base cases respectively. The average annual efficiency of the collector in Stockholm (12%) was much lower than that in Madrid (19%). The thermal COP was simulated to be approximately 0.70, but has not been possible to verify with measured data. The annual electrical COP was shown to be very dependent on the cooling load as a large proportion of electrical use is for components that are permanently on. For the cooling loads studied, the annual electrical COP ranged from 2.2 for a 2000 kWh cooling load to 18.0 for a 21000 kWh cooling load. There is however a potential to reduce the electricity consumption in the machine, which would improve these figures significantly. It was shown that a cooling tower is necessary for the Madrid climate, whereas a dry cooler is sufficient for Stockholm although a cooling tower does improve performance. The simulation study was very shallow and has shown a number of areas that are important to study in more depth. One such area is advanced control strategy, which is necessary to mitigate the weakness of the technology (low temperature lift for cooling) and to optimally use its strength (storage).

Methodology for identifying parameters for the TRNSYS model Type 210 -wood pellet stoves and boilers

This report describes a method how to perform measurements on boilers and stoves and how to identify parameters from the measurements for the boiler/stove-model TRNSYS Type 210. The model can be used for detailed annual system simulations using TRNSYS. Experience from measurements on three different pellet stoves and four boilers were used to develop this methodology. Recommendations for the set up of measurements are given and the re-quired combustion theory for the data evaluation and data preparation are given. The data evalua-tion showed that the uncertainties are quite large for the measured flue gas flow rate and for boilers and stoves with high fraction of energy going to the water jacket also the calculated heat rate to the room may have large uncertainties. A methodology for the parameter identification process and identified parameters for two different stoves and three boilers are given. Finally the identified models are compared with measured data showing that the model generally agreed well with meas-ured data during both stationary and dynamic conditions.

Borlänge och Falun Brundtland städer

Development of an infrastructure for Brundtland Renewable Energy Network - BREN är ettEuropean Commission Alterner Project med Contract no XVII/4. 1030/Z96-032.Projektet har sitt ursprung i UN rapporten “Our Common Future” 1989. Grundläggande för att nå de mål som rapporten föreslog var att förändra och minska användningen av energi. I Danmark tog man fram en handlingsplan för hur energiförbrukningen skulle kunna minskas “Energi 2000 - Handlingsplan för en bäredygtig udvikling”. De danska och schleswigholstenske energiministrarna överenskom att starta vars ett energisparprojekt i en mindre stad. Projektet kallades “Brundtlandby” och de två första var Toftlund i Sönderjylland och Bredstedt i Nordfriesland. Efter en kort tid anslöt sig ytterligare två tyska städer, Rheinsberg och Viernheim, samt Rajec i Slovakien. Mellan städerna formades ett nätverk för att utbyta information. Nätverket, Brundtland City Project, var inspirerande för de ingående städerna i det fortsatta arbetet med energisparåtgärder. Brundtland City Project presenterades på en internationell konferens “Cities and Energy” i Trondheim, Norge, december 1995. Projektet väckte intresse och det föreslogs att nätverket, som ett pilotprojekt, skulle utvecklas i norra Europa för att senare utökas med andra europeiska länder. En ledningsgrupp tillsattes medrepresentanter från de nordiska länderna.En ansökan sändes till European Commission, Alterner Program, och denna beviljades i juli 1996. Projektet indelades i (9 Activities. Aktivitet 1, var att sammanfatta erfarenheterna av Brundtland City Project i Toftlund, Danmark och Brundtland Cities Nätverket i Sovakien, Tyskland och Danmark. Den nordiska delen startar med Aktivitet 2, vilket var att engagera kommuner/städer i Finland, Norge och Sverige. Som samordnade för den svenska delen utsågs Solar Energy Research Center SERC vid Högskolan Dalarna. Projektet presenterades vid ett seminarium den 30 september för representanter för Borlänge och Falu kommuner. Den 10 december 1996 accepterade de två kommunerna inbjudan att ingå i det nordiska nätverket. Uppgiftslämnare i Borlänge kommun har varit Pelle Helje, Borlänge Energi och i Falu kommun Anders Goop, stadsbyggnadskontoret samt för underlag till Newsletter Jan Kaans, fastighetskontoret.Rapportering till Brundtland Center Danmark av arbetet i Borlänge och Falu kommuner har skett vid tre tillfällen, Aktiviteterna 2-5, 1997-12-16, Aktivitererna 6-7 inkluderande delar av aktiviterna 8-9, 1998-05-03 samt underlag till Newsletter, 1998-07-01. De nordiska rapporterna har sammanställts vid Brundtland Center Danmark för rapportering till European Commission. Gemensamt språk har varit engelska. Efter rapportering av aktiviterna 2 - 5 inbjöds till ett projektmöte och en studiedag vid Brundtland Center den 23 och 24 mars 1998. Det var första tillfället deltagarna i projektet strålade samman och nätverket tog därmed en mera konkret form. Man beslutade också att nästa projektmöte skulle hållas i Borlänge i augusti 1998 med Borlänge Energi och Solar Energy Research Center SERC som organisatörer. Beroende på att Brundtland Centre Danmark upplösts av ekonomiska skäl blev projektmötet i Borlänge inställt.Sammanställning av Final Report, October 1998, har utförts av Esbensen Consultants.Framtida utveckling av nätverketArbetet med Brundtland City Network avses fortsätta som ett “EU Thermie B-project” och nätverket kommer att utökas med fyra nya Brundtlandstäder från Österrike, Tyskland Italien och Storbritanien. Dessutom kommer samhället Putja i Estland att ingå i nätverket men detta financieras av EU-Phare programme.

Borlänge and Falun Brundtland cities

Development of an infrastructure for Brundtland Renewable Energy Network - BREN is a European Commission Alterner Project with Contract no XVII/4. 1030/Z96-032.The project has its origin in the UN-report “Our Common Future”, 1989. A change in and reduction of the use of energy was fundamental in order to reach the goals which the report proposed. Denmark decided on an action plan on how energy consumption could be reduced “Energi 2000 - Handlingsplan för en bäredygtig udvikling”. The ministries of energy in Denmark and Schleswig Holstein both agreed to start an energy saving project in a smaller town. The project was called “Brundtlandby” and the two first were Toftlund in South Jutland and Bredstedt in North Friesland. After a short period a further two German Cities, Rheinsberg and Viernheim, and Rajec in Slovakia joined the group. A network for the exchange of knowledge and experience between the cities was formed. The network, Brundtland City Project, inspired the participating cities in the continuing work with energy saving measures. The Brundtland City Project was presented at an international conference “Cities and Energy” in Trondheim, Norway,in December 1995. Great interest was shown in the project and it was decided that a network should be developed in northern European countries as a pilot project to be enlarged with other European countries later on. A steering committee was formed with representatives from the nordic countries.An application was sent to the European Commission, Alterner Program, and was approved in Juli 1996. The project was subdivided into nine activities. Activity 1, consisted of summarising the experiences of the Brundtland City Project in Toftlund, Denmark and the Brundtland Cities network in Slovakia, Germany and Denmark. The Scandinavian part started with Activity 2, to engage municipalities/cities in Finland, Norway and Sweden in the project. The Solar Energy Research Center, SERC, Högskolan Dalarna was appointed as co-ordinator for the Swedish part. The project was presented at a seminar on the 30th September for representatives from the municipalities of Borlänge and Falun. On the 10th of December 1996 the two municipalities accepted the invitation to join the Northern network. Pelle Helje, Borlänge Energi, has been informant for the municipality of Borlänge and Anders Goop, Department of Urban Planninginformant for the municipality of Falun with Jan Kaans, Estates department providing information to the basis for the Newsletter.Reports on the work in Borlänge and Falun municipalities have been made to Brundtland Center Denmark on three occasions; Activities 2-5, 16-12-1997, Activities 6-7, including parts of activities 8-9, 03-03-1998, and the basis for the Newsletter, 01-07-1998. The Nordic reports have been compiled at the Brundtland Center Denmark for submission to the European Commission. English has been the common language. After the report of activities 2 - 5 the participants wereinvited to a project meeting and a workshop at Brundtland Center the 23rd and 24th March 1998.This was the first occasion the participants in the project met and the network thus took a moreconcrete form. It also was decided that the next meeting should be in Borlänge in August 1998,with Borlänge Energi and Solar Energy Research Center SERC as organisers. As BrundtlandCentre Denmark was wound up for financial reasons, the project meeting in Borlänge wascancelled.Compilation of the Final Report was carried out by Esbensen Consultants in October 1998Future development of the networkIt is intended to continue the work with the Brundtland City Network as an “EU Thermie Bproject”and the network will be enlarged with the addition of four new Brundtland Cities from Austria, Germany, Italy and Great Britain. In addition the village of Putja in Estonia will join the network but this will be financed by the EU-Phare programme.

After work : en longitudinell studie i arbetsmiljöns långsiktiga inverkan på sambandet mellan socioekonomisk position och äldres ohälsa

After Work. The long-term effects of work environment on the association between adult socioeconomic position and ill health among the elderly The aim of this study is to analyse the long-term effects of work environment on the association between adult socioeconomic position (SEP) and six ill health outcomes among the elderly. Data was drawn from the longitudinal Level of Living and the SWEOLD-surveys. The individuals are followed from 1968 to 1992 and from 1981 to 2002 and 2004, combining baseline information regarding SEP and work environment during the period of occupational activity with the ill health outcomes from the follow-up studies. Strongest effects where revealed when controlling for the physical work environment on the association between both measures of SEP and two of the ill health outcomes: musculoskeleta lpain and physical performance. The psychological work environment, however, explained very small parts of the associations. The results, even controlled for SEP, exposed strong direct relations between ill health and psychological work environment and rather strong relations to physical work environment. As socioeconomic position indicates a particular structural position within society it may determine the likelihood of health damaging exposures during the period of occupational activity. This study shows that the effect of work environment significantly affects ill health among the elderly. Hence, the results indicate the importance of taking measures in improving work environment during the labour-market participation period, especially since policy-makers attempt to convince workers to stay longer in the workforce.

Modelagem numérica da evolução da linha de costa das praias localizadas a oeste da cidade de Fortaleza, Ceará : trecho compreendido entre o rio Ceará e a praia do Cumbuco

Há aproximadamente meio século, as praias situadas a sotamar do Porto do Mucuripe, em Fortaleza, vem sofrendo intensos processos erosivos, creditados em grande parte à construção e ampliação deste porto. O fato é que o acentuado crescimento urbano da capital cearense ocasionou a fixação de dunas e a quebra do fluxo longitudinal de sedimentos em seu litoral, resultando no recuo da linha de costa e na necessidade de intervenção antrópica por meio de obras rígidas que viessem a garantir a preservação da infra-estrutura existente nos trechos mais afetados. Como conseqüência da fixação das praias, o suprimento de material sedimentar passou a ficar retido, enquanto que o potencial de transporte das ondas se preservou. A quebra deste equilíbrio dinâmico acarretou a transferência dos processos erosivos para as praias adjacentes, o que tornou-se um problema cada vez maior, pois as soluções adotadas nestas praias eram idênticas às anteriores. As conseqüências deste processo para uma cidade como Fortaleza, onde o turismo é uma das principais fontes de renda, são graves, dado que como resultado final, encontramos longos trechos de praias com a balneabilidade comprometida e perda de qualidade visual. O litoral situado a oeste da capital é limitado à direita pela foz do Rio Ceará e à esquerda por um promontório rochoso, onde situa-se a Ponta do Pecém. Este trecho compreende aproximadamente 30 km de praias arenosas, com granulometria média e fina, e com ondas incidindo sobre a costa de forma obliqua, o que as torna o principal mecanismo de transporte de sedimentos. A ocupação urbana concentra-se principalmente nas praias mais próximas a Fortaleza, onde observa-se ainda, o afloramento de rochas de praia e grande perda de material sedimentar, fornecendo indícios da transferência dos processos erosivos da orla marítima da capital para estas praias. Com a conclusão das obras do Porto do Pecém e de um pólo industrial que visa desfrutar da localização estratégica deste porto, é natural que ocorra uma intensificação nos processos de ocupação urbana das praias próximas à área. Tal constatação motivou um trabalho de modelagem da dinâmica desta zona com o objetivo de nortear um plano de uso e ocupação das áreas localizadas próximas à praia, de forma que se possa prever o comportamento da linha de costa e evitar que sejam repetidos certos equívocos como a construção em zonas de forte dinâmica e a fixação das fontes primárias de fornecimento de sedimentos, que são as dunas frontais. Dada a disponibilidade de dados, bons processadores e aos custos significativamente reduzidos da modelagem numérica, adotou-se o pacote GENESIS – RCPWAVE, que além de ser de domínio público, é a base do sistema de modelagem de linha de costa adotado pelo CERC (Coastal Engineering Research Center), U.S.A., para aplicações em costa aberta, em regiões sujeitas às intervenções humanas. A calibração do modelo se fez considerando as linhas de praia medidas em 1974 pela DHN e em 2001 com o uso de GPS. Os dados de onda utilizados foram obtidos por um ondógrafo direcional do tipo Waverider, instalado a uma profundidade de 18 metros nas proximidades da Ponta do Pecém. Os dados relativos ao modelo conceitual dos processos predominantes na região, como: contribuições externas, variação granulométrica e variações sazonais de perfis foram obtidos de levantamentos bibliográficos de trabalhos anteriores. Por último, informações relativas às estruturas existentes e seu comportamento, ao afloramento de formações rochosas e o último levantamento da linha de praia, foram obtidas através de trabalhos de campo. De uma forma geral, o comportamento previsto pelo modelo mostrou-se semelhante ao observado nos diferentes levantamentos. Considerando-se as limitações dos processos envolvidos no levantamento de dados, onde tanto a carta da DHN quanto o mapeamento por satélite estão sujeitos a imprecisões e ainda, que a série de dados confiáveis de ondas para a região possuía apenas dois anos, é importante notar que, em linhas gerais, a formulação matemática do modelo representou satisfatoriamente os processos envolvidos. Os resultados fornecidos possibilitam a extrapolação da evolução da linha de costa e indicam pontos de provável recuo ou avanço da praia, norteando a sua ocupação. A ferramenta gerada proporciona ainda a avaliação do impacto de intervenções por meio de estruturas rígidas ou engordamento de praia ao longo do tempo e gera uma estimativa dos valores de deriva litorânea para os diferentes trechos de praia, possibilitando avaliar os efeitos das intervenções nas praias adjacentes.

Calibração e aplicação do modelo numérico genesis nas praias de Tramandaí e Imbé-RS

O modelo numérico GENESIS (Generalized Model for Simulating Shoreline Change) é parte de um sistema de modelagem de linha de praia, o SMS (Shoreline Modeling System), desenvolvido pelo CERC (Coastal Engineering Research Center), U.S.A. É um modelo genérico, determinístico e bidimensional, com grande flexibilidade para ser adaptado a costas abertas, arenosas e sujeitas a intervenção humana. Utilizado na previsão da resposta da linha praia as diversas obras costeiras que podem ser implantadas na mesma. Características estas, que fazem dele uma ferramenta indicada para a o estudo costa do Rio Grande do Sul e para o objetivo deste estudo. A aplicação do modelo de evolução de linha praia – GENESIS neste trabalho, tem como objetivos: calibrar o modelo numérico GENESIS para a costa centro norte do Rio Grande do Sul e avaliar seu uso como ferramenta na previsão de impactos ambientais gerados por obras costeiras, Alem de reproduzir as condições do modelo físico reduzido de 1965 e comparar os resultados entre as simulações matemática e física. O modelo foi aplicado num trecho de linha de praia da região centro norte do Rio Grande do Sul, nas praias de Tramandaí e Imbé. As quais já foram alvo de estudos anteriores através de modelo físico reduzido, em função do desejo deste município em construir molhes na desembocadura do canal da Laguna de Tramandaí. Para implementação do modelo numérico GENESIS foram utilizados dados das posições da linha de praia em três diferentes anos, coletados pelo CECO/UFRGS, dados de onda coletados pelo ondógrafo do IPH/UFRGS, e diversos dados sobre as praias e sua história, retirados da extensa bibliografia publicada sobre a região de estudo. A calibração do modelo foi realizada através das linhas de praia medidas em 1997 e em 2000. O modelo foi considerado calibrado quando o mesmo consegui reproduzir a linha de praia do ano 2000 a partir da linha de 1997, obtendo um erro máximo de 15 m. Foram realizadas simulações que reproduziam as simulações feitas em modelo físico reduzido do IPH em 1965. Através da comparação dos dados de onda utilizados no modelo físico reduzido de 1965 e dos dados de onda coletados pelo ondógrafo em 1996, pudemos observar a importância do uso de um série de dados de onda neste tipo de estudo, bem como, a desenvoltura e limitações do modelo numérico GENESIS na situações geradas.