Occupational exposure to toxigenic fungi from Aspergillus flavus complex

Bioaerosols are mainly composed of fungal particles, bacteria and plant spores, being fungi responsible for the release of VOCs and micotoxins into indoor environments. Aspergillus flavus is a common opportunistic pathogen causing human infections and is involved in the production of aflatoxin and other secondary metabolites associated with toxic and allergic reactions. Poultry workers are exposed to high concentrations of fungi and are therefore more prone to develop associated pathologies. To evaluate occupational exposure of the workers to Aspergillus flavus and aflatoxins, six animal production facilities were selected, including 10 buildings, from which indoor air samples and outdoor reference samples were obtained. Twenty-five duplicate samples were collected by two methodologies: impactation onto malt extract agar of 25L air samples using a Millipore Air Tester were used to evaluate quantitative (CFU/m3) and qualitative (species identification, whenever possible) sample composition; 300 L air samples collected with the Coriolis Air Sampler into phosphate–saline buffer were used to isolate DNA, following molecular identification of Aspergillus section flavi using nor-1 specific primers by real-time PCR.

Mould and yeast identification in archival settings: preliminary results on the use of traditional methods and molecular biology options in Portuguese archives

This project was developed to fully assess the indoor air quality in archives and libraries from a fungal flora point of view. It uses classical methodologies such as traditional culture media – for the viable fungi – and modern molecular biology protocols, especially relevant to assess the non-viable fraction of the biological contaminants. Denaturing high-performance liquid chromatography (DHPLC) has emerged as an alternative to denaturing gradient gel electrophoresis (DGGE) and has already been applied to the study of a few bacterial communities. We propose the application of DHPLC to the study of fungal colonization on paper-based archive materials. This technology allows for the identification of each component of a mixture of fungi based on their genetic variation. In a highly complex mixture of microbial DNA this method can be used simply to study the population dynamics, and it also allows for sample fraction collection, which can, in many cases, be immediately sequenced, circumventing the need for cloning. Some examples of the methodological application are shown. Also applied is fragment length analysis for the study of mixed Candida samples. Both of these methods can later be applied in various fields, such as clinical and sand sample analysis. So far, the environmental analyses have been extremely useful to determine potentially pathogenic/toxinogenic fungi such as Stachybotrys sp., Aspergillus niger, Aspergillus fumigatus, and Fusarium sp. This work will hopefully lead to more accurate evaluation of environmental conditions for both human health and the preservation of documents.

Avaliação da qualidade do ar interior e estudos CFD em espaços do ISEP

Mestrado em Engenharia Química. Ramo Tecnologias de Protecção Ambiental.

Estudo comparativo de sistemas em aquecimento

Trabalho Final de Mestrado para obtenção do grau de Mestre em Engenharia Mecânica

Projecto de AVAC de um edifício com multiutilização

Trabalho Final de Mestrado para obtenção do grau de Mestre em Engenharia Mecânica

Aspergillus genera fungal contamination in a Portuguese composting plant

Fungal contamination in composting facilities has been associated with increased respiratory and skin pathologies among compost workers. In this study we aim to characterize the fungal contamination caused by Aspergillus genera within a totally indoor composting plant located in Portugal. Air samples of 50L were collected from 6 sampling sites through an impaction method. Surfaces samples were collected by swabbing the surfaces of the same indoor sites. Pre-treatment and waste screw were the sampling sites of the analyzed composting plant with the highest Aspergillus load in the air. Globally, the genus Aspergillus presented the highest prevalence both in the air from (90.6%), and surfaces from the same sampling sites (60.8%). The results obtained in this study claim the attention to the need of further research regarding the fungal contamination dur to Aspergillus genus in composting plants.

Exposure to fungi in dockers

Several activities are ensured by dockers increase occupational exposure to several risk factors. being one of them the fungal burden from the load. In this study we aim at characterizing fungal contamination in one warehouse that storage sugar cane from a ship, and also in one crane cabinet that unload the same sugar cane from the ship. Air samples were collected from the warehouse and from inside the crane cabinet. An outdoor sample was also collected, from each sampling site, and regarding as reference. Sampling volume was selected depending in the contamination expected and the air samples were collect through an impaction method in a flow rate of 140 L/min onto malt extract agar (MEA) supplemented with chloramphenicol (0.05%), using the Millipore air Tester (Millipore). Surfaces samples from the warehouse were collected by swabbing the surfaces of the same indoor sites, using a 10 by 10cm square stencil according to the International Standard ISO 18593 (2004). The obtained swabs were then plated onto MEA. All the collected samples were incubated at 27ºC for 5 to 7 days. After laboratory processing and incubation of the collected samples, quantitative (colony-forming units - CFU/m3 and CFU/m2) and qualitative results were obtained with identification of the isolated fungal species. Aspergillus fumigatus present the highest fungal load and WHO guideline was overcome in both indoor sampling sites. The results obtained in this study highlight the need to know better the exposure burden from dockers, and specifically to fungi contamination.

Reabilitação de edifícios: enquadramento e estudo da reabilitação num grupo empresarial

Dissertação para obtenção do grau de Mestre em Engenharia Civil na Área de Especialização em Edificações

Complementarity of conventional and molecular methods in the assessment of fungal contamination caused by Aspergillus fumigatus complex in one Portuguese composting plant

The handling of waste and compost that occurs frequently in composting plants (compost turning, shredding, and screening) has been shown to be responsible for the release of dust and air borne microorganisms and their compounds in the air. Thermophilic fungi, such as A. fumigatus, have been reported and this kind of contamination in composting facilities has been associated with increased respiratory symptoms among compost workers. This study intended to characterize fungal contamination in a totally indoor composting plant located in Portugal. Besides conventional methods, molecular biology was also applied to overcome eventual limitations.

Fungal contamination in two Portuguese wastewater treatment plants

The presence of filamentous fungi was detected in wastewater and air collected at wastewater treatment plants (WWTP) from several European countries. The aim of the present study was to assess fungal contamination in two WWTP operating in Lisbon. In addition, particulate matter (PM) contamination data was analyzed. To apply conventional methods, air samples from the two plants were collected through impaction using an air sampler with a velocity air rate of 140 L/min. Surfaces samples were collected by swabbing the surfaces of the same indoor sites. All collected samples were incubated at 27°C for 5 to 7 d. After lab processing and incubation of collected samples, quantitative and qualitative results were obtained with identification of the isolated fungal species. For molecular methods, air samples of 250 L were also collected using the impinger method at 300 L/min airflow rate. Samples were collected into 10 ml sterile phosphate-buffered saline with 0.05% Triton X-100, and the collection liquid was subsequently used for DNA extraction. Molecular identification of Aspergillus fumigatus and Stachybotrys chartarum was achieved by real-time polymerase chain reaction (RT-PCR) using the Rotor-Gene 6000 qPCR Detection System (Corbett). Assessment of PM was also conducted with portable direct-reading equipment (Lighthouse, model 3016 IAQ). Particles concentration measurement was performed at five different sizes: PM0.5, PM1, PM2.5, PM5, and PM10. Sixteen different fungal species were detected in indoor air in a total of 5400 isolates in both plants. Penicillium sp. was the most frequently isolated fungal genus (58.9%), followed by Aspergillus sp. (21.2%) and Acremonium sp. (8.2%), in the total underground area. In a partially underground plant, Penicillium sp. (39.5%) was also the most frequently isolated, also followed by Aspergillus sp. (38.7%) and Acremonium sp. (9.7%). Using RT-PCR, only A. fumigatus was detected in air samples collected, and only from partial underground plant. Stachybotrys chartarum was not detected in any of the samples analyzed. The distribution of particle sizes showed the same tendency in both plants; however, the partially underground plant presented higher levels of contamination, except for PM2.5. Fungal contamination assessment is crucial to evaluating the potential health risks to exposed workers in these settings. In order to achieve an evaluation of potential health risks to exposed workers, it is essential to combine conventional and molecular methods for fungal detection. Protective measures to minimize worker exposure to fungi need to be adopted since wastewater is the predominant internal fungal source in this setting.

Assessment of fungal contamination in waste sorting and incineration: case study in Portugal

Organic waste is a rich substrate for microbial growth, and because of that, workers from waste industry are at higher risk of exposure to bioaerosols. This study aimed to assess fungal contamination in two plants handling solid waste management. Air samples from the two plants were collected through an impaction method. Surface samples were also collected by swabbing surfaces of the same indoor sites. All collected samples were incubated at 27◦C for 5 to 7 d. After lab processing and incubation of collected samples, quantitative and qualitative results were obtained with identification of the isolated fungal species. Air samples were also subjected to molecular methods by real-time polymerase chain reaction (RT PCR) using an impinger method to measure DNA of Aspergillus flavus complex and Stachybotrys chartarum. Assessment of particulate matter (PM) was also conducted with portable direct-reading equipment. Particles concentration measurement was performed at five different sizes (PM0.5; PM1; PM2.5; PM5; PM10). With respect to the waste sorting plant, three species more frequently isolated in air and surfaces were A. niger (73.9%; 66.1%), A. fumigatus (16%; 13.8%), and A. flavus (8.7%; 14.2%). In the incineration plant, the most prevalent species detected in air samples were Penicillium sp. (62.9%), A. fumigatus (18%), and A. flavus (6%), while the most frequently isolated in surface samples were Penicillium sp. (57.5%), A. fumigatus (22.3%) and A. niger (12.8%). Stachybotrys chartarum and other toxinogenic strains from A. flavus complex were not detected. The most common PM sizes obtained were the PM10 and PM5 (inhalable fraction). Since waste is the main internal fungal source in the analyzed settings, preventive and protective measures need to be maintained to avoid worker exposure to fungi and their metabolites.

Avaliação de compostos halogenados em água e ar de piscinas

A procura de piscinas para a prática de atividades desportivas, recreativas e/ou terapêuticas tem sofrido um aumento gradual ao longo do tempo. No entanto, nas piscinas existem vários perigos associados à sua utilização. Relativamente aos perigos químicos, a utilização de desinfetantes à base de cloro, bromo ou compostos derivados vai, por um lado, inativar microrganismos patogénicos mas, por outro, dar origem a subprodutos ao reagir com compostos orgânicos presentes na água. Os trihalometanos são um exemplo de subprodutos que se podem formar e, entre os compostos principais, estão o clorofórmio (TCM), bromodiclorometano (BDCM), clorodibromometano (CDBM) e bromofórmio (TBM). Este trabalho teve como objetivo o desenvolvimento de uma metodologia analítica para a determinação de trihalometanos em água e ar de piscinas e a sua aplicação a um conjunto de amostras. Para a análise dos compostos, foi utilizada a microextração em fase sólida no espaço de cabeça (HS-SPME) com posterior quantificação dos compostos por cromatografia gasosa com detetor de captura eletrónica (GC-ECD). Foi realizada uma otimização das condições de extração dos compostos em estudo em amostras de água, através da realização de dois planeamentos experimentais. As condições ótimas são assim obtidas para uma temperatura de extração de 45ºC, um tempo de extração de 25 min e um tempo de dessorção de 5 min. Foram analisadas amostras de águas de piscina cedidas pelo Centro de Estudos de Águas, sendo avaliada a aplicação da técnica HS-SPME e o efeito de matriz. O modo como se manuseiam as soluções que contêm os compostos em estudo influencia os resultados devido ao facto destes serem bastante voláteis. Concluiu-se também que existe efeito de matriz, logo a concentração das amostras deverá ser determinada através do método de adição de padrão. A caraterização da água de piscinas interiores permitiu conhecer a concentração de trihalometanos (THMs). Foram obtidas concentrações de TCM entre 4,5 e 406,5 μg/L sendo que apenas 4 das 27 amostras analisadas ultrapassam o valor limite imposto pelo Decreto-Lei nº306/2007 (100 μg/L) no que diz respeito a águas de consumo humano e que é normalmente utilizado como valor indicativo para a qualidade das águas de piscina. Relativamente à concentração obtida no ar de uma piscina interior, foi detetada uma concentração média de 224 μg/m3 de TCM, valor muito abaixo dos 10000 μg/m3 impostos pelo Decreto-lei nº24/2012, como valor limite para exposição profissional a agentes químicos.

Fungal contamination assessment in Portuguese elderly care centers

Individuals spend 80-90% of their day indoors and elderly subjects are likely to spend even a greater amount of time indoors. Thus, indoor air pollutants such as bioaerosols may exert a significant impact on this age group. The aim of this study was to characterize fungal contamination within Portuguese elderly care centers. Fungi were measured using conventional as well as molecular methods in bedrooms, living rooms, canteens, storage areas, and outdoors. Bioaerosols were evaluated before and after the microenvironments' occupancy in order to understand the role played by occupancy in fungal contamination. Fungal load results varied from 32 colony-forming units CFU m(-3) in bedrooms to 228 CFU m(-3) in storage areas. Penicillium sp. was the most frequently isolated (38.1%), followed by Aspergillus sp. (16.3%) and Chrysonilia sp. (4.2%). With respect to Aspergillus genus, three different fungal species in indoor air were detected, with A. candidus (62.5%) the most prevalent. On surfaces, 40 different fungal species were isolated and the most frequent was Penicillium sp. (22.2%), followed by Aspergillus sp. (17.3%). Real-time polymerase chain reaction did not detect the presence of A. fumigatus complex. Species from Penicillium and Aspergillus genera were the most abundant in air and surfaces. The species A. fumigatus was present in 12.5% of all indoor microenvironments assessed. The living room was the indoor microenvironment with lowest fungal concentration and the storage area was highest.

Sistema de treino para ciclistas

No trabalho é desenvolvido um sistema de treino para ciclistas. O sistema de treino é constituído por uma bicicleta de ―Spinning‖, um travão accionado electricamente, e por um sensor de velocidade, utilizado para medir a velocidade de rotação da roda de inércia. Nos primeiros capítulos encontra-se o estudo dos vários conceitos que envolvem o sistema de treino. É realizado um estudo sobre as principais forças que actuam numa bicicleta. Outro conceito estudado é o filtro Kalman (FK). Este será importante para o controlo do sistema de treino. O modelo do sistema de treino está dividido em duas partes. A primeira corresponde ao sistema mecânico, e a segunda o sistema de controlo e actuação. Este é constituído por um sensor de velocidade, uma unidade de estimação e o sistema de actuação do travão da bicicleta. A unidade de estimação é composta por conjunto de filtros de Kalman que estima a velocidade, a aceleração e a posição necessárias ao cálculo da força resistente ao movimento do conjunto ciclista bicicleta. Os resultados da simulação do sistema mostram que o sistema de treino modelado apresenta um desempenho bastante razoável. A estimação efectuada pelos filtros dos valores da velocidade, da aceleração e da posição do ciclista, permite a unidade de controlo do sistema calcular o valor da força resistente ao movimento.

Avaliação do desempenho energético e da qualidade do ar de uma piscina coberta

Este trabalho teve como propósito fazer uma avaliação do desempenho energético e da qualidade do ar no interior das instalações de uma Piscina Municipal Coberta, localizada na zona norte de Portugal, sendo estabelecidos os seguintes objetivos: caracterização geral da piscina, no que respeita aos seus diferentes espaços e equipamentos, cálculo dos consumos térmicos e elétricos bem como o registo das concentrações de elementos poluentes para controlo da qualidade do ar no interior da piscina, tendo como base a legislação atualmente em vigor. A caracterização geral da piscina permitiu verificar algumas inconformidades como a temperatura da água nos tanques de natação que tem valores superiores aos recomendados e a sala de primeiros socorros que não possui acesso direto ao exterior. Acrescente-se que o pavimento nos chuveiros da casa de banho feminina e os valores de pH para água do tanque grande e pequeno não estão sempre dentro da gama de recomendação. O caudal da renovação de ar está a ser operado manualmente e quando está a funcionar a 50% da sua capacidade máxima, que acontece numa parte do dia, apenas consegue renovar 77,5% do caudal recomendado pelo RSECE. Para se obter o valor recomendado é necessário ter pelo menos 7 horas com o caudal a 100% da capacidade máxima. A avaria na UTA2 originou que 40% dos registos diários da humidade relativa interior estivessem fora da gama de valores recomendados e que esta é fortemente dependente da humidade no exterior e pode ser agravada quando as portas dos envidraçados da nave são abertas. Analisando ainda a quantidade de água removida na desumidificação do ar com a água evaporada em condições de Outono-Inverno ou Primavera-Verão, este estudo permitiu concluir que todas as combinações demonstraram a necessidade de desumidificação salvo a combinação Outono-Inverno e UTA2 a funcionar a 100% da sua capacidade máxima. Os isolamentos das tubagens na sala das caldeiras foram observados e comparados com as soluções recomendadas pelas empresas especialistas e verificou-se que alguns estão mal colocados com parcial ou total degradação, promovendo perdas térmicas. No caso das perdas calorificas por evaporação, estas representaram cerca de 67,78% das perdas totais. Como tal, estudou-se a aplicação de uma cobertura sobre o plano de água durante o período de inatividade da piscina (8 horas) e verificou-se que o resultado seria uma poupança de 654,8 kWh/dia, na ausência de evaporação da água, mais 88,00 kWh/dia do período da UTA2 a funcionar a 50% da sua capacidade, perfazendo um total de 742,8 kWh/dia. A aplicação da cobertura permite obter um VAL de valor positivo, uma TIR de 22,77% e sendo este valor superior ao WACC (Weight Average Cost of Capital), o projeto torna-se viável com um Pay-Back de 3,17 anos. Caracterizou-se também o consumo total diário em eletricidade, e verificou-se que as unidades de climatização, as bombas de circulação de água, a iluminação, e outros equipamentos representam, respetivamente, cerca de 67,81, 25,26, 2,68 e 3,91% da energia elétrica total consumida. Por fim, a análise à qualidade do ar no interior da nave em Maio e Setembro identificou que as concentrações de ozono apresentavam valores no limite do aceitável em Maio e superiores ao valor de emissão em Setembro. Os compostos orgânicos voláteis também apresentavam valores em Maio 4,98 vezes superior e em Setembro 6,87 vezes superior aos valores máximos exigidos pelo D.L. nº 79/2006. Houve ainda altas concentrações de radão registadas na casa dos filtros, em Maio com um valor 11,49 vezes superior, no entanto esse valor desceu em Setembro para 1,08 vezes, mesmo assim superior ao exigido pelo D.L. nº 79/2006.