Sola romani: morteros hidráulicos romanos en la Península Ibérica

En esta investigación se han analizado morteros de cal de cronología romana en el interior de la Península Ibérica. Para ello, se seleccionó una serie de muestras procedentes de diversos yacimientos, y de estructuras de carácter industrial. Estas muestras presentan aditivos cerámicos y conglomerantes de cal, como característica principal. Desde un principio el esfuerzo debía de centrarse en los fragmentos cerámicos presentes en los morteros. Para ello se documentaron varios morteros con aditivos cerámicos, a fin de conocer sus características básicas (componentes, distribución, micro-estratigrafía, granulometría, etc.). Por ello, y una vez tomadas las muestras, ésta fueron tratadas y procesadas para desarrollar una primera fase de estudio por medio de macroscopía. Se obtuvieron buenos resultados en cuanto a la caracterización visual de los morteros, localizando y documentando los fragmentos cerámicos. Durante la observación de dichos aditivos se observó que los fragmentos cerámicos tenían unas coronas o anillos de coloración que recorrían el borde, justo al contacto con la matriz de cal. Fueron seleccionados algunos fragmentos en los que eran más visibles dichos anillos. A fin de conocer la posible relación entre algunos yacimientos cercanos y la presencia de dicho anillo cromáticos se desarrolló una microscopía óptica polarizada, realizando láminas delgadas de las muestras y sobre los fragmentos cerámicos más determinantes, en concreto de una serie de enclaves del valle del Henares. Además de caracterizar microscópicamente los morteros, se observó que los anillos no eran un defecto visual ni una alteración física, producida tal vez por la extracción, la fase del corte o por la cocción de la cerámica. Tras analizar varios ejemplares se pudo apreciar que esos anillos eran habituales en todas las muestras y que se presentaban de diferente manera, es decir, que se observaban en granos cerámicos de diferentes características físicas (cochura, tamaño, situación con respecto del conglomerante, etc.). A fin de conocer los aspectos químicos de dicha alteración se seleccionó un grupo de muestras en las que los resultados macroscópicos habían sido muy claros, y en las que la microscopía óptica polarizada había determinado en los bordes, áreas adecuadas para otros análisis. Se realizó un mapeado o mapping de elementos químicos, a fin de saber qué podía estar sucediendo en esa interfaz entre el fragmento cerámico y la matriz de cal. Gracias a los resultados obtenidos se comprobó que existía una acumulación potencial de calcio tanto en el interior de los granos cerámicos como en el exterior, justo en la zona de contacto con el conglomerante, formando manchas que recorrían longitudinalmente el borde. Estos datos fueron muy útiles para llevar a cabo la siguiente fase de estudio, que permitiría conocer puntualmente qué estaba sucediendo químicamente en esa zona de contacto. Finalmente y con el objetivo de describir química y puntualmente este efecto en las adiciones cerámicas, se volvió a seleccionar una serie de muestras, escogidas esta vez en función de los granos cerámicos que cumpliesen unas variables estadísticas. Se eligieron granos con distintos tipos de cocciones, así como granos con tamaños diversos y granos con aditivo ceniciento en la matriz de cal, pensando que podrían ser las variables más útiles de interpretar de existir algún tipo de cambio químico entre la arcilla cocida y la matriz de cal. Tales variables se adaptaron a un sistema estadístico multi-varial y geométrico, con el objetivo de sintetizar los resultados y visualizar de forma óptima los datos en conjunto, como se ha comentado en varias ocasiones en este trabajo. Una vez seleccionados los granos por variables se procedió a realizar un análisis lineal y espectral semi-cuantitativo de SEM-EDX, con el que se caracterizaba químicamente una sección lineal del grano, desde la matriz de arcilla cocida de la cerámica hasta la matriz de cal –del interior al exterior del grano- pasando por el centro de la banda de reacción. Este análisis permitió determinar que se había producido una serie de cambios químicos porcentuales en los granos de cerámica. Dichos cambios se resumen en un incremento global de los porcentajes de calcio en el interior de las bandas de reacción de la cerámica, desde el borde mismo del anillo hasta el exterior. Así también se observaron picos porcentuales en el interfaz del fragmento cerámico con la matriz de cal, lo que confirmaba los resultados obtenidos por medio del mapping. Globalmente en todas las muestras se apreció un hombro en las gráficas de calcio a su paso por la zona de afección del anillo de reacción. Los restantes porcentajes de magnesio, silicio y aluminio se mantienen normales. En esta tesis se ha confirmado que dicho incremento global de calcio se acentúa en las muestras en donde no hay cenizas en la matriz de cal. Los casos correspondientes a estos granos sufren un incremento mayor que en el resto. La segunda variable que sufre un mayor incremento de calcio es la que corresponde a granos con buena cocción de la arcilla. Por lo tanto, parece que la tercera variable, la que corresponde con el tamaño del fragmento cerámico, no es decisiva. Por lo tanto, teniendo en cuenta la prueba visual de los anillos de reacción, y atendiendo a los resultados químicos, podríamos pensar que ese incremento de calcio en la banda de reacción de los fragmentos cerámicos se debió a una absorción de calcio en el interior de la arcilla cocida en la fase inmediatamente previa al fraguado, incluso durante el apagado de la cal. Es en este punto donde estaría la clave del cambio químico que se produce en esta interfaz, el calcio sílice-aluminato del que algunos autores ya han investigado. Esta absorción de calcio en el interior del grano no vendría sola, sino que generaría una costra de cal en el interfaz exterior de la cerámica, la cual ha sido observada químicamente por mapping y mineralógicamente por medio de microscopía óptica de polarización. La consecuencia de estos resultados es, primero, la mejora de nuestro conocimiento general acerca del factor hidráulico en los morteros. Asimismo se aprecia que la incorporación de materiales orgánicos como cenizas, puede alterar los porcentajes de calcio en el interior de los aditivos cerámicos, por lo que habría que sopesar, en trabajos futuros, si este tipo de material es adecuado o no en las mezclas destinadas a la restauración, así como seguir indagando en las propiedades de los morteros con la incorporación de aditivos orgánicos. Desde el punto de vista de la catalogación de los suelos industriales hidráulicos de época romana, además de mejorar la documentación incorporando micro-estratigrafías y granulometrías, la investigación de este material histórico constructivo mejora en cuanto a que se incorporan ensayos sencillos, que facilitan incluso la peritación de un estado de conservación por medio de una lupa binocular. Arqueológicamente hablando, es muy interesante correlacionar fábricas diferentes de estructuras situadas o bien en un mismo yacimiento, o bien en una misma área regional. Los estudios de caracterización y micro-estratigrafía no sólo aportan datos nuevos de cara a la restauración de morteros, sino que crean la posibilidad de generar patrones constructivos que sirvan de fósiles-guía para datar relativamente a unas estructuras o a otras. En lo referido a los resultados obtenidos en los diferentes complejos arqueológicos se ha observado una diferencia entre los morteros destinados a piletas y cubetas con respecto a los suelos industriales de uso indeterminado. La muestra correspondiente al yacimiento de Las Arenas no dispone de ninguna micro-estratigrafía, como sí por el contrario en las muestras obtenidas en Rotonda de Mejorada, Val de la Viña y La Magdalena. En estos enclaves las estructuras presentan grandes similitudes, con diferentes niveles constructivos empleando morteros de cal con áridos y gravas en las capas interiores, y áridos con adiciones cerámicas en las exteriores. En lo relativo a la granulometría las adiciones cerámicas de las muestras de Val de la Viña y La Magdalena presentan varias coincidencias en cuanto al tamaño de los granos y la distribución. Asimismo, de las muestras tomadas en La Magdalena, existe una gran diferencia entre las muestras MG1, MG2, MG3 y MG4 con respecto a las muestras MG5 y MG6, correspondientes éstas últimas a un mortero con fragmentos cerámicos de gran tamaño. Las estructuras EMG1 y EMG2, correspondientes a una cubeta y una pileta de La Magdalena, guardan similitud en lo referido a la micro-estratigrafía y a la granulometría. Se ha determinado que su función, así como su fabricación, debieron estar vinculadas a un mismo contexto cronocultural. Química y mineralógicamente, las muestras presentan características iguales, con presencia de un conglomerante de cal con áridos y aditivos cerámicos de diferentes cochuras. Destaca la muestra de Las Arenas, con un tamaño de los fragmentos cerámicos muy superior al resto, seguido de la estructura EMG3 de La Magdalena. Las muestras restantes de éste enclave, junto con las muestras recogidas en Val de la Viña y Rotonda de Mejorada presentan condiciones similares. En conclusión, los datos revelan que existían diferentes fábricas destinadas a distintas finalidades, y que las estructuras industriales empleaban aditivos cerámicos para la manipulación de productos con líquidos, de distintas densidades pero que requerían de cierto grado de hidraulicidad. ABSTRACT Lime Roman mortars from the Iberian Peninsula has been analyzed in this reesearch. A group of samples were selected from some sites and all the samples come from industrial structures. All this samples show ceramic additives. From the start, the effort was centered in the pieces of pottery that were found in the mortars. The samples were treated and processed to develop a first phase of the research using macroscopy. With this technique, great results were achieved in the characterization of mortars, the microstratigraphy and the location of the ceramic pieces. While observing these pieces, it was seen that the fragments of pottery had a ring bordering the piece. The pieces with the bigger and more vivid rings were chosen and they were analyzed by a polarized light microscope. The mortars were characterized microscopically and it also showed that the rings were not a physical alteration or a visual defect. After some more tests, the rings were a chemical change associated with the hydraulicity of the mortar. The best samples were selected and mappings of their chemical elements were performed in order to know what could be happening in the interface between the ceramic matrix fragment and lime. With the results obtained it was found that there was a potential; both calcium accumulation within the ceramic grains and outside, just in the area of contact with the binder, forming spots longitudinally along the edge. These data were very useful for carrying out the next phase of study, which would meet promptly what was happening chemically in the area of contact. Another group of samples were taken, and this time focused on ceramic grains that met a statistical variables. Grains were chosen with two types of cooking as well as grains with different sizes and grains with ash additive in the matrix of lime, thinking that might be the most logical to be some sort of chemical change between the baked clay and lime array variables . Such variables were adapted to a multi-varial and geometric statistical system in order to synthesize the results and optimally display the data together, as mentioned several times in this work. After selecting the variables grains proceeded to perform a linear and spectral analysis SEM-EDX. This analysis led to determine that the chemical changes were graduals. These changes are summarized in an increase in the percentages of calcium inside the reaction rim of ceramics, from the edge to the outer ring. So percentage increasing is also observed at the interface of the ceramic matrix fragment with lime, confirming the results obtained by the mapping. Overall in all samples can be seen a shoulder in graphic calcium through the area of the ring reaction condition. The remaining percentages of magnesium, silicon and aluminum are usual. We have promptly confirmed that the increase of calcium is accentuated in samples where there is no ash and lime matrix. Cases for these grains suffer a greater increase than the rest. The second variable suffering more calcium is increased corresponding to good cooking grains with clay. Therefore, it appears that the variable size of the fragment is not critical. Therefore, considering the visual tests to the rings and their response to chemical results, we might think that increasing calcium inside the ceramic fragments was due to an injection of calcium inside clay in the run-up to the setting phase. It is at this point that would be the key to the chemical change that occurs at this interface, silica-calcium aluminate some authors have already investigated. This injection of calcium into the grain does not come alone, but generate a lime crust on the outside interface of ceramics, which we tested for mapping is real in our samples. The consequence of these results is the improvement of our understanding of historical hydraulic factor in building materials, such as mortar. For example, knowing that the incorporation of organic materials such as ash powder, may be detrimental to the injection of calcium inside the ceramic additives. Archaeologically speaking, it's very interesting to correlate different factories or structures located on a single site, or in the same regional area. Characterization studies and microstratigraphy not only provide new information to help restore mortars, but create the possibility of generating constructive patterns that serve as guide fossils to determinate the age of the structures. With regard to the results obtained in different archaeological sites it has seen a difference between mortars of pools or sinks with respect to industrial floors of undetermined use. The sample of the site of Las Arenas does not have any micro-stratigraphy, as if instead in the samples obtained in Rotonda de Mejorada, Val de la Viña and La Magdalena sites. In these settlements the structures are really similar, with different construction levels using lime mortars with aggregates and gravel in the inner layers, and ceramic aggregates as external additions. With regard to the grain size of the ceramic additions Val de la Viña and La Magdalena samples has several coincidences about the size of grains and distribution. Also, samples taken at La Magdalena, there is a difference between the MG1, MG2, MG3 and MG4 samples and the MG5 and MG6 samples, so the last corresponding to a mortar samples with larger ceramic fragments. The EMG1 and EMG2 structures, corresponding to a bucket and a pool of La Magdalena settlement, have similarities with regard to micro-stratigraphy and grain size. It has been determined that the function and manufacturing must be linked with a same chronocultural context.

Membrane-bound state of the colicin E1 channel domain as an extended two-dimensional helical array

Atomic level structures have been determined for the soluble forms of several colicins and toxins, but the structural changes that occur after membrane binding have not been well characterized. Changes occurring in the transition from the soluble to membrane-bound state of the C-terminal 190-residue channel polypeptide of colicin E1 (P190) bound to anionic membranes are described. In the membrane-bound state, the α-helical content increases from 60–64% to 80–90%, with a concomitant increase in the average length of the helical segments from 12 to 16 or 17 residues, close to the length required to span the membrane bilayer in the open channel state. The average distance between helical segments is increased and interhelix interactions are weakened, as shown by a major loss of tertiary structure interactions, decreased efficiency of fluorescence resonance energy transfer from an energy donor on helix V of P190 to an acceptor on helix IX, and decreased resonance energy transfer at higher temperatures, not observed in soluble P190, implying freedom of motion of helical segments. Weaker interactions are also shown by a calorimetric thermal transition of low cooperativity, and the extended nature of the helical array is shown by a 3- to 4-fold increase in the average area subtended per molecule to 4,200 Å2 on the membrane surface. The latter, with analysis of the heat capacity changes, implies the absence of a developed hydrophobic core in the membrane-bound P190. The membrane interfacial layer thus serves to promote formation of a highly helical extended two-dimensional flexible net. The properties of the membrane-bound state of the colicin channel domain (i.e., hydrophobic anchor, lengthened and loosely coupled α-helices, and close association with the membrane interfacial layer) are plausible structural features for the state that is a prerequisite for voltage gating, formation of transmembrane helices, and channel opening.

Yeast microarrays for genome wide parallel genetic and gene expression analysis

We have developed high-density DNA microarrays of yeast ORFs. These microarrays can monitor hybridization to ORFs for applications such as quantitative differential gene expression analysis and screening for sequence polymorphisms. Automated scripts retrieved sequence information from public databases to locate predicted ORFs and select appropriate primers for amplification. The primers were used to amplify yeast ORFs in 96-well plates, and the resulting products were arrayed using an automated micro arraying device. Arrays containing up to 2,479 yeast ORFs were printed on a single slide. The hybridization of fluorescently labeled samples to the array were detected and quantitated with a laser confocal scanning microscope. Applications of the microarrays are shown for genetic and gene expression analysis at the whole genome level.

The 65-kDa carrot microtubule-associated protein forms regularly arranged filamentous cross-bridges between microtubules

In plants, cortical microtubules (MTs) occur in characteristically parallel groups maintained up to one microtubule diameter apart by fine filamentous cross-bridges. However, none of the plant microtubule-associated proteins (MAPs) so far purified accounts for the observed separation between MTs in cells. We previously isolated from carrot cytoskeletons a MAP fraction including 120- and 65-kDa MAPs and have now separated the 65-kDa carrot MAP by sucrose density centrifugation. MAP65 does not induce tubulin polymerization but induces the formation of bundles of parallel MTs in a nucleotide-insensitive manner. The bundling effect is inhibited by porcine MAP2, but, unlike MAP2, MAP65 is heat-labile. In the electron microscope, MAP65 appears as filamentous cross-bridges, maintaining an intermicrotubule spacing of 25–30 nm. Microdensitometer-computer correlation analysis reveals that the cross-bridges are regularly spaced, showing a regular axial spacing that is compatible with a symmetrical helical superlattice for 13 protofilament MTs. Because MAP65 maintains in vitro the inter-MT spacing observed in plants and is shown to decorate cortical MTs, it is proposed that this MAP is important for the organization of the cortical array in vivo.

Structural activity of a cloned potassium channel (ROMK1) monitored with the atomic force microscope: The “molecular-sandwich” technique

The atomic force microscope (AFM) was used to continuously follow height changes of individual protein molecules exposed to physiological stimuli. A AFM tip was coated with ROMK1 (a cloned renal epithelial potassium channel known to be highly pH sensitive) and lowered onto atomically flat mica surface until the protein was sandwiched between AFM tip and mica. Because the AFM tip was an integral part of a highly flexible cantilever, any structural alterations of the sandwiched molecule were transmitted to the cantilever. This resulted in a distortion of the cantilever that was monitored by means of a laser beam. With this system it was possible to resolve vertical height changes in the ROMK1 protein of ≥0.2 nm (approximately 5% of the molecule’s height) with a time resolution of ≥1 msec. When bathed in electrolyte solution that contained the catalytic subunit of protein kinase A and 0.1 mM ATP (conditions that activate the native ion channel), we found stochastically occurring height fluctuations in the ROMK1 molecule. These changes in height were pH-dependent, being greatest at pH 7.6, and lowering the pH (either by titration or by the application of CO2) reduced their magnitude. The data show that overall changes in shape of proteins occur stochastically and increase in size and frequency when the proteins are active. This AFM “molecular-sandwich” technique, called MOST, measures structural activity of proteins in real time and could prove useful for studies on the relationship between structure and function of proteins at the molecular level.

High-sensitivity array analysis of gene expression for the early detection of disseminated breast tumor cells in peripheral blood

Early detection is an effective means of reducing cancer mortality. Here, we describe a highly sensitive high-throughput screen that can identify panels of markers for the early detection of solid tumor cells disseminated in peripheral blood. The method is a two-step combination of differential display and high-sensitivity cDNA arrays. In a primary screen, differential display identified 170 candidate marker genes differentially expressed between breast tumor cells and normal breast epithelial cells. In a secondary screen, high-sensitivity arrays assessed expression levels of these genes in 48 blood samples, 22 from healthy volunteers and 26 from breast cancer patients. Cluster analysis identified a group of 12 genes that were elevated in the blood of cancer patients. Permutation analysis of individual genes defined five core genes (P ≤ 0.05, permax test). As a group, the 12 genes generally distinguished accurately between healthy volunteers and patients with breast cancer. Mean expression levels of the 12 genes were elevated in 77% (10 of 13) untreated invasive cancer patients, whereas cluster analysis correctly classified volunteers and patients (P = 0.0022, Fisher's exact test). Quantitative real-time PCR confirmed array results and indicated that the sensitivity of the assay (1:2 × 108 transcripts) was sufficient to detect disseminated solid tumor cells in blood. Expression-based blood assays developed with the screening approach described here have the potential to detect and classify solid tumor cells originating from virtually any primary site in the body.

An orchestrated gene expression component of neuronal programmed cell death revealed by cDNA array analysis

Programmed cell death (PCD) during neuronal development and disease has been shown to require de novo RNA synthesis. However, the time course and regulation of target genes is poorly understood. By using a brain-biased array of over 7,500 cDNAs, we profiled this gene expression component of PCD in cerebellar granule neurons challenged separately by potassium withdrawal, combined potassium and serum withdrawal, and kainic acid administration. We found that hundreds of genes were significantly regulated in discreet waves including known genes whose protein products are involved in PCD. A restricted set of genes was regulated by all models, providing evidence that signals inducing PCD can regulate large assemblages of genes (of which a restricted subset may be shared in multiple pathways).