On the Role of Delays in Biological Systems : Analysis and Design

This work quantifies the nature of delays in genetic regulatory networks and their effect on system dynamics. It is known that a time lag can emerge from a sequence of biochemical reactions. Applying this modeling framework to the protein production processes, delay distributions are derived in a stochastic (probability density function) and deterministic setting (impulse function), whilst being shown to be equivalent under different assumptions. The dependence of the distribution properties on rate constants, gene length, and time-varying temperatures is investigated. Overall, the distribution of the delay in the context of protein production processes is shown to be highly dependent on the size of the genes and mRNA strands as well as the reaction rates. Results suggest longer genes have delay distributions with a smaller relative variance, and hence, less uncertainty in the completion times, however, they lead to larger delays. On the other hand large uncertainties may actually play a positive role, as broader distributions can lead to larger stability regions when this formalization of the protein production delays is incorporated into a feedback system.

Furthermore, evidence suggests that delays may play a role as an explicit design into existing controlling mechanisms. Accordingly, the reccurring dual-feedback motif is also investigated with delays incorporated into the feedback channels. The dual-delayed feedback is shown to have stabilizing effects through a control theoretic approach. Lastly, a distributed delay based controller design method is proposed as a potential design tool. In a preliminary study, the dual-delayed feedback system re-emerges as an effective controller design.

Modelado y control de estación de célula de manipulación

[ES]El objetivo de este proyecto es el diseño e implementación del modelo de la estación FMS 201 (alimentación de la base) y el diseño e implementación del control de la estación. Esta estación pertenece a la serie FMS 200 (sistema didáctico modular de ensamblaje flexible) distribuido por la empresa SMC. Se dispone uno en el laboratorio de investigación del departamento de Ingeniería de Sistemas y Automática de la Escuela Superior de Ingeniería de Bilbao (EHU/UPV). Para el desarrollo e implementación del modelo se usará la herramienta informática Automation Studio. Para el control del modelo se usará el PLC. Para el intercambio de información entre modelo y controlador se utilizará la comunicación OPC Para el control de la estación se usa un PLC S7-300 de la marca SIEMENS. Se finaliza el documento realizando las pruebas de validación del modelo desarrollado, ejecutándose el programa de control en el PLC y corriendo el modelo desarrollado en el PC.

Broodstock management status and some suggestions to control negative selection and inbreeding in hatchery stocks in Bangladesh

The freshwater river systems and floodplains of Bangladesh are the breeding grounds for 13 endemic species of carps and barbs and a large number of other fish species, including a number of exotic carps and other species that have been introduced for aquaculture. Since 1967, breeding of endemic and exotic aquaculture species for seed producton through hypophysation techniques has become a common practice. The paper describes the present status of broodstock management, identifies problems, and suggests some guidelines to control negative selection and inbreeding in hatchery stocks in Bangladesh.

Evaluating holonic control systems: A case study

in the last 10 years many designs and trial implementations of holonic manufacturing systems have been reported in the literature. Few of these have resulted in any industrial take up of the approach and part of this lack of adoption might be attributed to a shortage of evaluations of the resulting designs and implementations and their comparison with more conventional approaches. This paper proposes a simple approach for evaluating the effectiveness of a holonic system design, with particular focus on the ability of the system to support reconfiguration (in the face of change). A case study relating to a laboratory assembly system is provided to demonstrate the evaluation approach. Copyright © 2005 IFAC.

Auto ID based control systems - An overview

This paper will provide a rationale for developing control systems based on the availability of automated identification (Auto ID) information provision. Much of the Auto-ID research has to date focussed on developing the essential infrastructure for dynamically extracting, networking and storing product data. These developments will help to revolutionise the accuracy, quality and timeliness of data acquired by Business Information Systems and should lead to major cost savings and performance improvements as a result. This paper introduces an additional phase of Auto ID research and development in which the nature of control system decisions is reconsidered in the light of the availability of ubiquitous, unique, item-level information. The paper will: (i) Indicate why the availability of ubiquitous, unique, item-level data can enable enhanced and fundamentally different control approaches and highlight potential benefits from control systems incorporating this Auto ID data (ii) Demonstrate what is required to develop control systems based around the availability of Auto ID data. (iii) Outline the research challenges in determining how such systems will be developed.

Robotics and neuroscience: A rhythmic interaction

At the crossing between motor control neuroscience and robotics system theory, the paper presents a rhythmic experiment that is amenable both to handy laboratory implementation and simple mathematical modeling. The experiment is based on an impact juggling task, requiring the coordination of two upper-limb effectors and some phase-locking with the trajectories of one or several juggled objects. We describe the experiment, its implementation and the mathematical model used for the analysis. Our underlying research focuses on the role of sensory feedback in rhythmic tasks. In a robotic implementation of our experiment, we study the minimum feedback that is required to achieve robust control. A limited source of feedback, measuring only the impact times, is shown to give promising results. A second field of investigation concerns the human behavior in the same impact juggling task. We study how a variation of the tempo induces a transition between two distinct control strategies with different sensory feedback requirements. Analogies and differences between the robotic and human behaviors are obviously of high relevance in such a flexible setup. © 2008 Elsevier Ltd. All rights reserved.

Diminishing Returns of Engineering Effort in Telerobotic Systems

Wilson, M.S. and Neal, M.J., 'Diminishing Returns of Engineering Effort in Telerobotic Systems', IEEE Transactions on Systems, Man and Cybernetics - Part A:Systems and Humans, 2001, September, volume 31, number 5, pp 459-465, IEEE Robotics and Automation Society, ed. Dautenhahn,K., Special Issue on Socially Intelligent Agents - The Human in the Loop