Immunodetection of planktonic algae

Interest in the identification and characterisation of cyanobacteria and dinoflagellates in aquatic environments is increasing rapidly due to the perceived roles of these organisms in primary production and nuisance aspects in terms of water treatment and public health. Techniques for the identification and quantification of these organisms currently are limited, and the application of molecular approaches provides fundamental taxonomic information and techniques of practical value. Antigenic properties of algal cells may be useful taxonomic markers. Immunodetection techniques utilise the specificity of the antibody/antigen association as a probe for recognising and distinguishing between microorganisms according to their cell- surface chemistry. Immunofluorescent detection of unicellular cyanobacteria and dinoflagellates has been studied with success in marine and freshwater ecosystems and a range of techniques and results are presented and discussed. The most recent advances in the study of planktonic algae have come with the application of continuous flow cytometric methods (CFC). Flow cytometry makes use of the autofluorescence properties of the algal cells, which alone can be used to demonstrate their presence and permit their quantification in natural water samples. When used in conjunction with immunolabelling techniques, the potential of CFC analysis is broadened to study the serological/strain composition of plankters in natural populations. Changes in algal strains represented within and between waters over periods of time are reported and discussed, along with the ecological issues thus raised.

The diversity and ecological role of protozoa in fresh waters

Protozoa feed on and regulate the abundance of most types of aquatic microorganisms, and they are an integral part of all aquatic microbial food webs. Being so small, aerobic protozoa thrive at low oxygen tensions, where they feed (largely unaffected by metazoan grazing) on the abundance of other microorganisms. In anaerobic environments, they are the only phagotrophic organisms, and they live in unique symbiotic consortia with methanogens, sulphate reducers and non-sulphur purple bacteria. The number of extant species of protozoa may be quite modest (the global number of ciliate species is estimated at 3000), and most of them probably have cosmopolitan distributions. This will undoubtedly make it easier to carry out further tasks, e.g. understanding the role of protozoan species diversity in the natural environment.

Detection of cryptosporidium oocysts in water and environmental concentrates

Whilst current methods for the isolation and enumeration of Cryptosporidium spp. oocysts in water have provided some insight into their occurrence and significance, they are regarded as being inefficient, variable and time-consuming, with much of the interpretation being left to the expertise of the analyst. Two expectations of novel developments are to reduce the variability and subjectivity associated with the isolation and identification of oocysts. Flocculation, immunomagnetisable and flow cytometric techniques, for concentrating oocysts from water samples, should prove more reliable than current methods, whilst the development of more avid and specific monoclonal antibodies in conjunction with the use of nuclear fluorochromes will aid identification. Further insight into the viability, taxonomy, species identification, infectivity and virulence of the parasite should be forthcoming through the use of techniques such as the polymerase chain reaction, in situ hybridisation and non-uniform alternating current electrical fields. Such information is necessary in order to enable microbiologists, epidemiologists, engineers, utility operators and regulators to assess the safety of a water supply, with respect to Cryptosporidium contamination, more effectively.

An introduction to RIVPACS

RIVPACS (River InVertebrate Prediction And Classification System) is a software package developed by the Institute of Freshwater Ecology (IFE). The primary application is to assess the biological quality of rivers within the UK. RIVPACS offers site-specific predictions of the macroinvertebrate fauna to be expected in the absence of major environmental stress. The expected fauna is derived by RIVPACS using a small suite of environmental characteristics. The biological evaluation is then obtained by comparing the fauna observed at the site with the expected fauna. RIVPACS also includes a site classification based on the macroinvertebrate fauna of the component reference sites. New sites, judged by their fauna to be of high biological quality, may be allocated to classification groups within the fixed RIVPACS classification. This has potential for evaluating sites for conservation. In this chapter, the origins and history of the RIVPACS approach are described, including major scientific and operational developments over the life of the project. RIVPACS III is described in detail and predictions at different taxonomic levels are demonstrated. The value of the reference dataset for river management and conservation is examined, and the chapter concludes with a brief consideration of some future challenges.

The potential of RIVPACS for predicting the effects of environmental change

RIVPACS has been used successfully for biological assessment of river water quality but its potential in forecasting the effects of environmental change has not been investigated. This study has shown that it is possible to simulate faunal changes in response to environmental disturbance, provided that the disturbance directly involves the environmental variables used in RIVPACS predictions. These variables relate to channel shape, discharge and substratum. Many impacts, particularly those associated with pollution, will not affect these variables and therefore RIVPACS cannot simulate the effects of pollution. RIVPACS was sensitive only to major changes in substratum. It was concluded that, because of the static nature of RIVPACS, it cannot respond to the dynamic effects and processes associated with environmental disturbance. Thus RIVPACS, while showing direction of change and indicating sensitive taxa, cannot be used to predict or forecast the effects of environmental impacts.

Using RIVPACS for studies on conservation and biodiversity

Invertebrate conservation relies not only on public support and political will, but also on possessing an adequate understanding of the distribution and ecology of invertebrate species and communities. In the UK, RIVPACS is making an important contribution to assessing the conservation importance of river invertebrate assemblages. So far, work has largely centred on using RIVPACS as an integral part of SERCON (System for Evaluating Rivers for Conservation), in which data collected using the standard RIVPACS method are interpreted with reference to conservation criteria such as species richness and representativeness. Applications of RIVPACS to other areas of conservation - whether providing information on the ecological requirements of rare species, monitoring the success of river restoration projects, or making broader assessments of sustainability - are probably more limited, but merit further examination. It is important to develop closer links between RIVPACS and techniques such as SERCON and RHS (River Habitat Survey) in order to maximise the benefit each can bring tostudies on conservation and biodiversity. It should also be recognised that there are limitations in transferring such systems to other countries where approaches to nature conservation may be very different.

Concentrations of major ions in the stream water of the River Duddon, England, 1970-1974 [Dataset]

This dataset provides raw data of chemical analyses made during studies on seasonal variations of some major ions in the stream water of the River Duddon in Cumbria. Measurements of sodium, calcium, potassium, magnesium and chloride ions and pH were taken at 5 stations in the River Duddon between January 1970 and August 1974.

Concentrations of major ions in the stream water of the upper basin of the River Duddon, England, 1972-1974 [Dataset]

This dataset provides raw data of chemical analyses made during studies on seasonal variations of some major ions in the stream water of the upper basin of the River Duddon in Cumbria. Measurements of sodium, calcium, potassium, magnesium and chloride ions and pH were taken at 26 stations in the River Duddon basin between 1972 and 1974.

Analysis of stream waters in the catchment of Lake Windermere (1975-1978), England [Dataset]

This dataset provides raw data of chemical analyses made during studies on seasonal variations of some major ions in the stream water of the catchment of Lake Windermere in Cumbria. Measurements of sodium, calcium, potassium, magnesium, chloride ions and pH were taken at 37 stations in the catchment between 1975 and 1978.

Analyses of treated sewage effluent from Grasmere Treatment Unit (1974-1976), England [Dataset]

This dataset provides raw data of chemical analyses made during studies on seasonal variations of treated sewage effluent from Grasmere Treatment Unit in Cumbria. Measurements of sodium, calcium, potassium, magnesium and chloride ions were taken between 1974 and 1976.

Major ions in 25 frequently sampled tarns in the English Lake District (1954-56, 1974-1976) [Dataset]

This dataset provides raw data of chemical analyses made during studies on seasonal variations of 25 frequently sampled tarns in Cumbria. Measurements of sodium, calcium, potassium, magnesium, pH, chloride ions, alkalinity, sulphite, strong acids and nitrate were taken between 1954 and 1956 and between 1974-1976.

Concentrations of major ions in 182 tarns in the English Lake District (1953-1978) [Dataset]

This dataset provides raw data of chemical analyses made during studies on seasonal variations of 182 tarns in the English Lake District, Cumbria. Measurements of sodium, calcium, potassium, magnesium, pH, chloride ions, alkalinity, sulphite, strong acids and nitrate were taken between 1953 and 1978.

Physico-chemical interactions between compartment-forming lipids and other prebiotically relevant biomolecules

Lipids are essential constituents of contemporary living cells, serving as structural molecules that are necessary to form membranous compartments. Amphiphilic lipid-like molecules may also have contributed to prebiotic chemical evolution by promoting the synthesis, aggregation and cooperative encapsulation of other biomolecules. The resulting compartments would allow systems of molecules to be maintained that represent microscopic experiments in a natural version of combinatorial chemistry. Here we address these possibilities and describe recent results related to interactions between amphiphiles and other biomolecules during early evolution toward the first living cells.

Elementos-traço (mercúrio total, selênio e cobre) em penas de pinguins do gênero Pygoscelis da Ilha Rei George, Antártica

Este estudo teve como objetivo avaliar a magnitude da exposição de pinguins do gênero Pygoscelis da Antártica ao mercúrio total (HgT), selênio (Se) e cobre (Cu) e verificar a variabilidade destes elementos-traço de acordo com suas características biológicas, para tal foram utilizadas penas do peito de Pygoscelis papua (n=30), P. antarctica (n=21) e P. adeliae (n=48) que corresponderam àquelas coletadas em animais da Ilha Rei George, Antártica. Encontrou-se níveis aparentemente inferiores de HgT e Se em P. papua tendo também sido a espécie que mais se distinguiu das outras duas. Além disto, houve correlação entre os níveis de HgT e Se para as espécies P. antarctica e P. adeliae indicando que é possível que ocorra nos pinguins um processo de destoxificação do mercúrio orgânico por meio do selênio, porém isto não pôde foi confirmado. Ressalta-se que o atual estudo é o primeiro a relatar níveis de HgT em penas do peito da espécie P. antarctica, sendo esta informação relevante para o entendimento e conservação desta espécie de pinguim da Antártica. De modo geral o cobre (8346/32545 ng/g p.s. mín/máx) foi o elemento que apareceu em concentrações maiores se comparado ao selênio (618,7/7923,5 ng/g p.s. mín/máx) e mercúrio total (114,6/1180,2 ng/g p.s. mín/máx). Estas elevadas concentrações de cobre nas penas possivelmente se deve a incorporação via alimentação composta essencialmente de krill, que é um crustáceo de altas concentrações deste elemento essencial. Genericamente foi possível observar que todas as informações reportadas no atual trabalho, tais como as correlações entre os elementos-traço (HgT e Se) e características biológicas, mostram que as três espécies de pinguins analisadas seguem padrões distintos de distribuição de elementos-traço possivelmente porque apresentam dieta diferenciada, além disto, é provável que as características individuais influenciem nestes padrões, e por isto devem ser avaliadas para um melhor entendimento da distribuição dos elementos-traço nestes animais. Observa-se que as concentrações do elemento-traço não essencial HgT aparentemente não constituiu uma ameaça aos pinguins porque foi inferior ao nível considerado prejudicial a aves, enquanto o selênio é um elemento que deve ser constantemente monitorado pois exibiu concentrações próximas àquelas considerada danosa para aves quando incorporadas via dieta. Verificou-se que a presença dos elementos-traço não constitui uma ameaça a saúde dos Pygoscelis da Ilha Rei George, apesar disso, faz-se necessária a realização de um programa de monitoramento constante nesta região, que é uma área ainda considerada como não impactada pela ação antrópica.

Growth, mortality and recruitment of Omani abalone (Haliotis mariae)

Historical length-frequency data of Oman abalone (Haliotis mariae) from two areas (Sadh and Hadbin) of the Dhofar coast of the Sultanate of Oman were used to estimate growth parameters by nonlinear least square fitting. The results were verified using the ELEFAN I program and then combined to calculate total mortality (Z) and recruitment patterns. The growth parameters values with combined sexes were L sub( infinity ) = 137 mm shell length (SL), K = 0.75 year super(1) and 1.57 year super(1) on Sadh male and female, respectively. The female Z value in Hadbin was 1.55 year super(1) in 1989/90. The 1991 Z value for combined sexes were 2.37 year super(1) in Sadh and 1.66 year super(1) in Hadbin, showing much higher fishing pressure in recent years. There were two recruitment pulses, a major one in January and a minor one in May.