Modeling of allergen proteins found in sea food products

Shellfish are a source of food allergens, and their consumption is the cause of severe allergic reactions in humans. Tropomyosins, a family of muscle proteins, have been identified as the major allergens in shellfish and mollusks species. Nevertheless, few experimentally determined three-dimensional structures are available in the Protein Data Base (PDB). In this study, 3D models of several homologous of tropomyosins present in marine shellfish and mollusk species (Chaf 1, Met e1, Hom a1, Per v1, and Pen a1) were constructed, validated, and their immunoglobulin E binding epitopes were identified using bioinformatics tools. All protein models for these allergens consisted of long alpha-helices. Chaf 1, Met e1, and Hom a1 had six conserved regions with sequence similarities to known epitopes, whereas Per v1 and Pen a1 contained only one. Lipophilic potentials of identified epitopes revealed a high propensity of hydrophobic amino acids in the immunoglobulin E binding site. This information could be useful to design tropomyosin-specific immunotherapy for sea food allergies.

Determination of some quality properties of marinated sea bream (Sparus Aurata L., 1758) during cold storage

In this study, it was aimed to determine the effect of sea bream (Sparus aurata) marinated some quality properties during cold storage. The fillets of fish were immersed into brine including 3.5% acetic acid 11% salt in the ratio of 1: 1.5 (fish: marinate brine) for marination process. After the process of ripening, samples were grouped into two and packed in plastic containers; one being plain (in sunflower oil) and the other being sauced (sauced prepared with sunflower oil). During storage, sensory, crude protein, lipid, dry matter and crude ash, TBA, TVB-N, TMA-N and peroxide analyses were done periodically. According to results of 200 days of storage, TVB-N values of sea bream marinates packaged as plain and sauced were 15.86/14.89 mg/100g, TBA 7.06/7.99 mg MA/kg, TMA-N 2.97/3.12, mg/100g, the value of peroxide was 7.23/7.45 meq/kg respectively. According to chemical and sensory analyses results obtained in the study; it was concluded that sea bream marinates packaged as plain and sauced can be stored in +4 °C for 200 days.

Peeps into fairyland : a panorama picture book of fairy stories

Kansikuva, kolmiulotteinen pop-up-kirja

Air-Sea Battle -konsepti John Wardenin Enemy as a System -teorian näkökulmasta

Tutkielman tavoitteena oli analysoida Air-Sea Battle -konseptia ja sen lähtökohtana ollutta viholliskuvaa John Wardenin Enemy as a System -teorian näkökulmasta julkisten asiakirjojen, raporttien ja artikkeleiden avulla. Tutkimusmenetelmänä on käytetty teoriaohjaavaa sisällönanalyysia. Tutkimusongelmaksi muodostui: ”Miten Air-Sea Battle -konsepti näyttäytyy Wardenin Enemy as a System -teorian näkökulmasta?” Tutkimuskysymyksien avulla pyrittiin lisäksi löytämään konseptin kehittämiseen johtaneita tekijöitä suurstrategisella tasolla, arvioimaan konseptin mukaista aseellisen voiman käyttöä sekä analysoimaan konseptia suhteessa Wardenin näkemyksiin sotilasstrategiasta. Wardenin Enemy as a System -teoria on esitelty tutkielman alkupuolella hyödyntäen alkuperäistekstejä, aiheesta kirjoitettuja tutkimuksia ja artikkeleita sekä sotataidollista kirjallisuutta. Air-Sea Battle -konseptia käsittelevän luvun aineisto on luokiteltu Wardenin neljän strategisen kysymyksen teemojen, eli tavoitteen, vaikuttamisen kohteiden, keinojen ja irtautumisen, mukaisesti. Tärkeimmät lähteet varsinaisen Air-Sea Battle -asiakirjan lisäksi olivat Yhdysvaltojen turvallisuus- ja sotilasstrategiaa määrittelevät dokumentit, tutkimuslaitosten julkaisemat raportit sekä aikakauslehtiartikkelit. Aineiston perusteella Yhdysvallat näkee tiettyjen valtioiden, kuten Kiinan, kehittyvät niin kutsutut anti-access/area denial -suorituskyvyt uhkana alueelliselle tasapainolle ja heidän kyvylleen ylläpitää sotilaallista läsnäoloa strategisesti merkittävillä alueilla. Air-Sea le -konseptin tavoitteena on määritellä ja kehittää suorituskyvyt, operatiiviset suunnitelmat ja toimintamallit, joiden mukaan toimivalla joukolla kyetään luomaan riittävä pelotevaikutus konfliktin ehkäisemiseksi tai säilyttämään toiminnanvapaus alueella sen muodostuessa.

The Baltic : sea of changes

Finnish Defence Studies is published under the auspices of the National Defence College, and the contributions reflect the fields of research and teaching of the College. Finnish Defence Studies will occasionally feature documentation on Finnish Security Policy. Views expressed are those of the authors and do not necessarily imply endorsement by the National Defence College.

EU Strategy for the Baltic Sea Region: its added value in environmental social and economic dimensions

The European Council has invited the European Commission to present the first macro-regional strategy – the EU Strategy for the Baltic Sea Region (EUSBSR) on the 14th of December 2007, primarily to address collective challenges and opportunities of the Region and also to engender cohesion in support of an European integration policy. However, macro-regional strategies conceived to aid European integration and territorial cohesion were viewed by academics with skepticism, obscuring the strategies’ potential impact. This thesis intends to investigate and measure the added value of the EUSBSR in order to analyze its impact on regional development and its feasibility as a guide for future programs intending to strengthen European cohesion and integration. To determine the added value of the EUSBSR the thesis is organized into three sections, so as to address environmental, social, and economic concerns, respectively. The first case examines EU-Russia cooperation in an environmental context to investigate how environmental cooperation with an external neighbor could forge increased cohesion in a macro-regional setting. To figure the added cooperation that academic cooperation among universities would contribute to social dimension, the work has chosen several study results. Lastly, to measure out the added value for the economic strategy objective, the study employs the project for Improved Global Competitiveness in an example of ‘A Baltic Sea Region Program for Innovation, Cluster and SME-Networks’ as an economic plan.

Between Dugin’s Eurasianism and Mahan’s Sea Power Concept: Russia’s Geopolitical Discourse within Foucault’s ‘Discursive Tree’ before and After the Incorporation of the Crimea

The fall of 2013 could be characterized as a crossroad in the geopolitics of Eastern Europe, namely Ukraine. Two rivalry geopolitical projects have been developing throughout the post-Cold War years, and it seems that they reached a collision point in Ukraine; a country whose authorities have been for long switching sides between the European Union and the Russian Federation in their foreign policy commitments. The refusal/postponing to sign the Association Agreement with Brussels, an expected event by a large category of the Ukrainian society, by Yanukovich’s government led to the outset of the latter; and brought a pro-Western, anti-Russian government in Kyiv. It seems that Ukraine, after those events, has embarked definitively on the path of integration into the West (European Union and possibly NATO). The Russian Federation, who has been throughout Putin’s years engaged into the re-integration of post-Soviet space, reacted to these developments in an assertive manner by violating borders, agreements and the territorial integrity of Ukraine. Thus, the incorporation of the Crimea into the Russian Federation is the first in its kind in the post-Soviet space, despite the existence of various other conflicts that broke out in the region after the Soviet Union broke up. I will investigate in this thesis the nature of what will be labelled, in this work, the Crimean issue. I argue that the incorporation of the Crimean peninsula into the Russian Federation marks a new era in Russian geopolitical thinking that shapes, to a far extent, Russian foreign policy. Discourse analysis will be the methodological basis for this study, with a special focus on Michel Foucault’s Archaeology of Knowledge. The innovation that this research brings is the fact that it discusses Russian geopolitical discourse within the scope of Foucault’s ‘discursive tree’, with a reference to the Crimean issue. A wide range of primary sources will be consulted in this study such as presidential addresses to the Federal Assembly (2000-2014), Foreign Policy Concepts of the Russian Federation (2000, 2008), Russian maritime doctrines, as wells as Dugin’s Osnovy Geopolitiki (Foundations of Geopolitics), Mahan’s (The Influence of Sea Power Upon History, 1660–1783) and other Eurasianism related literature.