A comprehensive and integrative reconstruction of evolutionary history for Anomura (Crustacea: Decapoda)

Background The infraorder Anomura has long captivated the attention of evolutionary biologists due to its impressive morphological diversity and ecological adaptations. To date, 2500 extant species have been described but phylogenetic relationships at high taxonomic levels remain unresolved. Here, we reconstruct the evolutionary history—phylogeny, divergence times, character evolution and diversification—of this speciose clade. For this purpose, we sequenced two mitochondrial (16S and 12S) and three nuclear (H3, 18S and 28S) markers for 19 of the 20 extant families, using traditional Sanger and next-generation 454 sequencing methods. Molecular data were combined with 156 morphological characters in order to estimate the largest anomuran phylogeny to date. The anomuran fossil record allowed us to incorporate 31 fossils for divergence time analyses. Results Our best phylogenetic hypothesis (morphological + molecular data) supports most anomuran superfamilies and families as monophyletic. However, three families and eleven genera are recovered as para- and polyphyletic. Divergence time analysis dates the origin of Anomura to the Late Permian ~259 (224–296) MYA with many of the present day families radiating during the Jurassic and Early Cretaceous. Ancestral state reconstruction suggests that carcinization occurred independently 3 times within the group. The invasion of freshwater and terrestrial environments both occurred between the Late Cretaceous and Tertiary. Diversification analyses found the speciation rate to be low across Anomura, and we identify 2 major changes in the tempo of diversification; the most significant at the base of a clade that includes the squat-lobster family Chirostylidae. Conclusions Our findings are compared against current classifications and previous hypotheses of anomuran relationships. Many families and genera appear to be poly- or paraphyletic suggesting a need for further taxonomic revisions at these levels. A divergence time analysis provides key insights into the origins of major lineages and events and the timing of morphological (body form) and ecological (habitat) transitions. Living anomuran biodiversity is the product of 2 major changes in the tempo of diversification; our initial insights suggest that the acquisition of a crab-like form did not act as a key innovation.

Alpheid shrimps (Crustacea: Decapoda: Alpheidae) of Vietnam

The present paper deals with a collection of alpheid shrimps from Vietnam received by Mr R. Serene, formerly Director the Institute of Oceanography, Nhatrang (Vietnam). Though small in size the material has proved to be fairly rich. It contains 23 species belonging to the genera Alpheopsis Coutiere, Synalpheus Bate and Alpheus Fabricius, the last named genus accounting for all but three species. Two new species, one each belonging to Alpheopsis and Alpheus, have been briefly described by the author (Tiwari, 1962) in an earlier paper. The remaining species are already known and some of them have an extensive distribution in the Indo-West-Pacific.

Efeitos bioquímicos da exposição ao nanomaterial óxido de grafeno em diferentes tecidos do camarão branco (Litopenaeus vannamei; Crustacea, Decapoda), através da suplementação na ração

O desenvolvimento da nanotecnologia vem se intensificando nos últimos anos. Sendo que os NM já estão sendo utilizados em vários produtos disponíveis no mercado. Dentre os NM mais utilizados estão os compostos de carbono que embora sejam compostos somente por este elemento podem ter estruturas diferentes que refletem em suas aplicações e possivelmente em seus efeitos. Dentre os NM de carbono, o grafeno e o óxido de grafeno apresentam promissoras características que ampliam sua utilização em diversos segmentos desde eletrônicos até a distribuição de medicamentos. A intensificação da produção e utilização destes NM é acompanhada pela liberação destes nanomateriais no ambiente que pode afetar os organismos vivos, principalmente os animais aquáticos. Entretanto, pouco se sabe sobre os efeitos do óxido de grafeno em crustáceos de importância comercial como é o caso do camarão branco Litopenaeus vannamei. Portanto, a presente dissertação teve como objetivo avaliar os efeitos biológicos da exposição ao óxido de grafeno em diferentes tecidos do camarão.

Ecological distribution of the shrimp Nematopalaemon schmitti (Crustacea: Decapoda: Caridea) in three bays on the south-eastern coast of Brazil

The relationships between the spatial and temporal variations in the abundance of the shrimp Nematopalaemon schmitti and water temperature, salinity, and texture and organic-matter content of the sediment, were analysed in Ubatumirim, Ubatuba and Mar Virado bays on the northern coast of São Paulo, Brazil. Sampling was carried out monthly, from January 1998 through December 1999, from a shrimp boat equipped with double-rig nets, along six transects in each bay. In total, 2 116 specimens of N. schmitti were caught. Their distribution differed among bays, transects and seasons (ANOVA, p < 0.05). Highest total abundance was found in areas of high organic-matter content, in substrate composed mainly of very fine sand and silt and clay, and during winter and autumn. Although multiple regression analysis showed no significant relationship (p > 0.05), observations suggest that water temperature, sediment texture, organic-matter content, and the presence of biodetritus and plant fragments, provided favourable environmental conditions for the establishment of N. schmitti in the region.

Processo biotecnológico voltado a produção de estoques poliploides do camarão-branco litopenaeus vannamei (decapoda, penaeidae)

without practical results so far. Protocols used in biotechnological cultured aquatic organisms aimed at increasing growth rates and disease resistance, have been studied and perfected. Among the available techniques, the application of chromosomal manipulation, although still nascent, is presented as a tool aimed at mitigating ecological and economical issues in shrimp farming. The polyploidization artificial method already employed in fish and shellfish, has been widely researched for use in farmed shrimp. Some limitations of this method of expansion in shrimp refer to a better knowledge of cytogenetic aspects, the level of sexual dimorphism and performance in growing conditions. To contribute on some of these issues, the present study aimed to characterize cytogenetic species Litopenaeus vannamei (Decapoda) and Artemia franciscana (Anostraca), analyze the effectiveness of methods for detection of ploidy, through the use of flow cytometry in processes of induction polyploidy cold thermal shock at different stages of development of newly fertilized eggs. Additionally, aimed also the qualitative and quantitative comparison of larval development between diploid and polyploid organisms, besides the identification of sexual dimorphism in L. vannamei, through geometric morphometrics. The results provide information relevant to the improvement and widespread use of biotechnological methods applied toward national productivity in shrimp farming

Biologia do caranguejo-uçá, Ucides cordatus (Crustacea: Decapoda: Brachyura), na Baía da Babitonga, Santa Catarina, Brasil

O objetivo deste estudo é caracterizar pela primeira vez alguns aspectos da reprodução do caranguejo-uçá em manguezais da Baía da Babitonga (Santa Catarina). Além disso, a densidade e o tamanho do estoque deste recurso pesqueiro foram também estimados. Os exemplares foram coletados mensalmente, de maio de 2002 a abril de 2003, em duas áreas distintas: Iperoba e Palmital; um total de 2265 espécimes (1623 machos e 642 fêmeas) foi analisado. Os machos com gônadas maturas foram registrados durante todo o ano, enquanto as fêmeas com gônadas maturas ocorreram em apenas cinco meses. As fêmeas ovígeras foram registradas apenas em dezembro e janeiro. O etograma do fenômeno de migração reprodutiva (andada) esteve em concordância com a maior atividade de caranguejos associada às luas cheias e novas, com maior intensidade em dezembro e janeiro, relacionados ao verão austral. A densidade total no Manguezal de Iperoba foi de 2,05 ± 0,97 ind./m², não diferindo significativamente daquela registrada para o Manguezal do Palmital (2,06 ± 1,08 ind./m²) (p < 0,05). A média global para a estimativa de densidade na Baia da Babitonga foi de 2,05 ± 1,00 ind./m², correspondendo a 1,42 ± 0,89 ind./m² com base nas galerias abertas e 0,64 ± 0,63 ind./m² para as galerias fechadas.

Kinetic Analysis of Gill (Na+,K+)-ATPase Activity in Selected Ontogenetic Stages of the Amazon River Shrimp, (Decapoda, Palaemonidae): Interactions at ATP- and Cation-Binding Sites

We investigated modulation by ATP, Mg2+, Na+, K+ and NH4 (+) and inhibition by ouabain of (Na+,K+)-ATPase activity in microsomal homogenates of whole zoeae I and decapodid III (formerly zoea IX) and whole-body and gill homogenates of juvenile and adult Amazon River shrimps, . (Na+,K+)-ATPase-specific activity was increased twofold in decapodid III compared to zoea I, juveniles and adults, suggesting an important role in this ontogenetic stage. The apparent affinity for ATP ( (M) = 0.09 +/- A 0.01 mmol L-1) of the decapodid III (Na+,K+)-ATPase, about twofold greater than the other stages, further highlights this relevance. Modulation of (Na+,K+)-ATPase activity by K+ also revealed a threefold greater affinity for K+ ( (0.5) = 0.91 +/- A 0.04 mmol L-1) in decapodid III than in other stages; NH4 (+) had no modulatory effect. The affinity for Na+ ( (0.5) = 13.2 +/- A 0.6 mmol L-1) of zoea I (Na+,K+)-ATPase was fourfold less than other stages. Modulation by Na+, Mg2+ and NH4 (+) obeyed cooperative kinetics, while K+ modulation exhibited Michaelis-Menten behavior. Rates of maximal Mg2+ stimulation of ouabain-insensitive ATPase activity differed in each ontogenetic stage, suggesting that Mg2+-stimulated ATPases other than (Na+,K+)-ATPase are present. Ouabain inhibition suggests that, among the various ATPase activities present in the different stages, Na+-ATPase may be involved in the ontogeny of osmoregulation in larval The NH4 (+)-stimulated, ouabain-insensitive ATPase activity seen in zoea I and decapodid III may reflect a stage-specific means of ammonia excretion since functional gills are absent in the early larval stages.

Infestation rates of the pedunculated barnacle Octolasmis lowei (Cirripedia: Poecilasmatidae) on the spider crab Libinia spinosa (Decapoda: Majoidea)

The prevalence and infestation intensities of Octolasmis lowei in the bronchial chambers of Libinia spinosa were evaluated according to the host's sex, size, and moult condition. Epibionts were classified as cyprid larvae, non-ovigerous or ovigerous according to their developmental stage. A median intensity of infestation of 21 epibionts/host was found (range = 1-644; Q(3) = 81). Epibiont prevalence values (88%) were higher on ovigerous female hosts than on males (55%) or on non-ovigerous females (31%). Intensity of infestation was positively correlated with host size in both sexes for non-ovigerous and ovigerous epibionts. No preference between host sex by cyprid larvae was observed, nor any correlation between cyprid abundance and host size. Cyprid larvae abundance was positively correlated with settled epibionts on both host sexes. The duration of the intermoult phase was the main factor linked to the establishment of sessile epibionts. These observations are important in relation to crabs that have a terminal moult, because these animals cannot eliminate their epibionts in future moults, thus increasing the importance of density-dependent mechanisms on epibiont establishment; in that way, prevalence of infestation alone can underestimate the real impact of infestation on the host's life cycle.

Impact of maintenance of Macrobrachium rosenbergii de Man, 1879 (Crustacea, Decapoda, Palaemonidae) broodstock on the water used in culture ponds

A produção aquícola gera benefícios sociais e econômicos, no entanto, também pode proporcionar impactos ambientais. Os objetivos deste trabalho foram: a) caracterizar os impactos causados pela manutenção de reprodutores do camarão-da-malásia (Macrobrachium rosenbergii) nas características físicas e químicas da água utilizada nos viveiros de cultivo; e b) avaliar a relação entre a biomassa de camarões e o impacto do cultivo na água utilizada no viveiro. Entre janeiro e dezembro de 2004, foram determinadas, mensalmente, a biomassa de M. rosenbergii, por meio de biometria, e as variáveis físicas e químicas da água de abastecimento e do efluente de um viveiro utilizado para a manutenção de reprodutores. Os resultados mostraram que o efluente possui maiores valores de clorofila a, material particulado em suspensão (MPS), pH, oxigênio dissolvido, nitrogênio Kjeldahl total (NKT) e nitrogênio Kjeldahl dissolvido (NKD), nitrogênio inorgânico (NI), fósforo (PT) e fósforo dissolvido (PD) e P-ortofosfato do que a água de abastecimento do viveiro. A maior biomassa de M. rosenbergii ocorreu em abril (127,0 g.m-2) e a menor em agosto (71,5 g.m-2) e houve correlações lineares positivas entre a biomassa de camarões e a intensidade do aumento de NKT, NKD, NI, PT e PD da água utilizada no viveiro. A manutenção de reprodutores de M. rosenbergii aumentou a clorofila-a, MPS, nitrogênio e fósforo da água utilizada no viveiro. Além disso, o aumento da biomassa de camarões intensifica a exportação de nitrogênio e fósforo do viveiro pelo efluente.

Reproductive cycle of the swimming crab Portunus spinimanus Latreille (Crustacea, Decapoda, Brachyura) from Ubatuba, São Paulo, Brazil

This study analyses some reproductive aspects of Portunus spinimanus Latreille, 1819, a crab usually commercialized in Ubatuba region. Monthly otter-trawl collections were taken for two years along the northern coast of São Paulo State, Brazil. The reproductive period was studied based on the frequency of ovigerous females in the population along the year; the frequency of physiologically mature swimming crabs and the type of spawn. The condition of development of ovigerous females ovary was associated with the stage of eggs development. This species presents continuous reproduction in Ubatuba region and total spawn, but with successive broods, which suggests a multiple spawn during the reproduction period.

Ablação ocular no camarão Macrobrachium rosenbergii (De Man) (Crustacea, Decapoda, Palaemonidae): efeitos sobre a reprodução, pigmentação epidérmica e atividade alimentar

This study analyze the consequences of unilateral and bilateral ablation based on ovigerous percentage, consecutive spawns, and secondary effects of the surgical process in the females of Macrobrachium rosenbergii (De Man, 1879). Two experiments were carried out with four and seven months old females in intermolt stage. Each experiment was comprised of control, unilateral and bilateral ablation. Eyestalk ablation was done with a bistoury with a topic hot cauterization followed by application of antibiotic pomades. The animals were maintained at constant temperature (28 ± 1,05ºC) and photoperiod of 12L: 12D within fibercement boxes with sandy bottom and biological filter. Females were observed once a day during fourteen weeks, registering gonadal condition, ecdysis and presence of spermatophore (mating) and spawning. Unilateral ablation technique is more efficient due to the anticipation of the first spawn, repeatability between spawns, expressive rate of ovigerous females and survival, that favored its applicability. Bilateral eyestalk ablation produced the mortality of ali the females with change in coloration and food activity patterns. These results corroborate other observations on penaeid shrimps. though bilateral ablation on some lobsters was a success. These results showing an interespecific variation and can be used in aquaculture projects.

The history of the introduction of the giant river prawn, Macrobrachium cf. rosenbergii (Decapoda, Palaemonidae), in Brazil: new insights from molecular data

The giant river prawn, Macrobrachium cf. rosenbergii, is one of the most cultivated freshwater prawns in the world and has been introduced into more than 40 countries. In some countries, this prawn is considered an invasive species that requires close monitoring. Recent changes in the taxonomy of this species (separation of M. rosenbergii and M. dacqueti) require a re-evaluation of introduced taxa. In this work, molecular analyses were used to determine which of these two species was introduced into Brazil and to establish the geographic origin of the introduced populations that have invaded Amazonian coastal waters. The species introduced into Brazil was M. dacqueti through two introduction events involving prawns originating from Vietnam and either Bangladesh or Thailand. These origins differ from historical reports of the introductions and underline the need to confirm the origin of other exotic populations around the world. The invading populations in Amazonia require monitoring not only because the biodiversity of this region may be affected by the introduction, but also because admixture of different native haplotypes can increase the genetic variability and the likelihood of persistence of the invading species in new habitats.

Ascidonia Flavomaculata (Heller, 1864), a new record for the Portuguese marine invertebrate fauna (Decapoda, Pontoniidae)

Several specimens of Ascidonia flavomaculata were collected during experimental fishing trials along the southern coast of Portugal. All specimens were associated with the solitary ascidian, Phallusia mammillata. The pontoniinae shrimp, A. flavomaculata is here recorded from the Portuguese coast for the first time, extending the species’ known distribution range further north along the coast of the eastern Atlantic Ocean.

First record of Calcinus tubularis on the southern coast of Portugal (Crustacea: Decapoda: Anomura: Diogenidae)

Twenty-five specimens of the hermit crab Calcinus tubularis were observed during SCUBA dives for fauna and flora assessment in the shallow rocky reefs of the southern coast of Portugal between 2003 and 2008. Of the specimens observed, only one specimen used a tube gallery, while the others occupied unidentified gastropod shells with strong bio-cover. Calcinus tubularis is here recorded from the mainland Portuguese coast for the first time. This is the first record of the species in European coastal waters outside the Mediterranean Sea (excluding the Atlantic Islands) and extends the known geographical distribution of the species further north in the north-eastern Atlantic.

Desenvolvimento dos ovários da lagosta Panulirus echinatus (Crustacea: Palinuridae) baseados nas análises macroscópica, microscópica e relação gonadossomática (RGS)

Os estádios de desenvolvimento dos ovários da lagosta Panulirus echinatus Smith, 1869 foram caracterizados com base nos aspectos macroscópicos, microscópicos e na relação gonadossomática (RGS). Através de amostragem mensal (novembro/1999 a outubro/2000) foram capturadas 711 fêmeas, empregando-se redes de espera de fundo. Retirou-se a região dorsal da carapaça para avaliação dos ovários. Estes foram dissecados, pesados, fixados em solução de Bouin e submetidos aos procedimentos histológicos. A análise microscópica dos ovários foi avaliada pela presença de células germinativas nas diferentes fases de desenvolvimento. Esta análise quando associada a macroscopia (mudança de cor e volume das gônadas no cefalotórax) e a relação gonadossomática (RGS) possibilitou a caracterização de cinco estádios de desenvolvimento: imaturo (I), em desenvolvimento (II), pré-maturação (III), maduro (IV) e pós-desova (V). As análises estatísticas confirmaram que a RGS pode ser utilizada como indicadora dos estádios de maturidade.