Supporting land use change modelling with automated monitoring of land use dynamics in the La Plata River Basin.

2008

Sensor TTC - the La Plata River basin application: policy cases, main land use change drivers and case studies.

2008

Small rivers in the southwestern Amazon and their role in CO(2) outgassing

A recent estimate of CO(2) outgassing from Amazonian wetlands suggests that an order of magnitude more CO(2) leaves rivers through gas exchange with the atmosphere than is exported to the ocean as organic plus inorganic carbon. However, the contribution of smaller rivers is still poorly understood, mainly because of limitations in mapping their spatial extent. Considering that the largest extension of the Amazon River network is composed of small rivers, the authors` objective was to elucidate their role in air-water CO(2) exchange by developing a geographic information system ( GIS)- based model to calculate the surface area covered by rivers with channels less than 100 m wide, combined with estimated CO(2) outgassing rates at the Ji-Parana River basin, in the western Amazon. Estimated CO(2) outgassing was the main carbon export pathway for this river basin, totaling 289 Gg C yr(-1), about 2.4 times the amount of carbon exported as dissolved inorganic carbon ( 121 Gg C yr(-1)) and 1.6 times the dissolved organic carbon export ( 185 Gg C yr(-1)). The relationships established here between drainage area and channel width provide a new model for determining small river surface area, allowing regional extrapolations of air - water gas exchange. Applying this model to the entire Amazon River network of channels less than 100 m wide ( third to fifth order), the authors calculate that the surface area of small rivers is 0.3 +/- 0.05 million km(2), and it is potentially evading to the atmosphere 170 +/- 42 Tg C yr(-1) as CO(2). Therefore, these ecosystems play an important role in the regional carbon balance.

Evidence of chromosome fusion in Gymnotus sylvius Albert & Fernandes-Matoli, 1999 (Teleostei: Gymnotiformes) detected by telomeric probes and R-banding

Gymnotus cf. carapo and Gynznotus sylvius are two fish species inhabiting the Upper Parana River Basin, presenting respectively 2n =54 and 2n = 40 chromosomes. In the present cytogenetic analysis, R-banding and telomere-sequence hybridization were carried out in order to determine the possible relationship between the karyotipes of these two species. Incorporation bands (R-bands) obtained for the two species allowed the identification of chromosome similarities, showing to be an usefull alternative to the G-banding methods, which fail in producing satisfying results in most of analyzed fish species. This approach, associated with the hybridization of telomeric sequences, permited to identify chromosomal rearrangements that could be used as indicators of karyotypic evolution within the group. In the present case, telomeric sequences were detected in the centromeric region of two metacentric chromosome pairs of Gymnotus sylvius. The results obtained after hybridization with the telomere sequences, coupled with the chromosome homeologies detected by R-banding, showed that G. cf carapo and G. sylvius should present a common ancestor, and this may also be corroborated by the similarities found in three chromosome pairs, that seem to have been conserved during the evolution of the two species. Based on the data here presented we propose that G. sylvius may have undergone a recent process of chromosome fusion that resulted in the diminution of its chromosome number.

5S rDNA chromosomal mapping and COI sequence analysis reveal differentiation among distinct populations of a characid fish Serrapinnus notomelas

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Baixa diversidade de zooplâncton na desembocadura de uma represa eutrófica (SP, Brasil): reflexo da poluição?

The Tiete River (in São Paulo state) receives most of the efuents of the metropolitan region of São Paulo; and the Barra Bonita reservoir, 200 km distant downstream, receives and recycle most of that pollution load. This work studied the ecological features of the zooplankton (Rotifera, Cladocera and Copepoda) sampled in a point of Tiete River's mouth. Monthly samples were collected, from April, 2001 to February, 2008. The hypothesis currently tested was that the composition and availability of zooplankton were similar to the others reservoir regions (middle and lacustrine sensu Thornton) and to other reservoirs of the Upper Parana River basin, supporting the idea that these organisms manage to stand the strong pollution. The reservoir shows a typical variation of accumulation, with wide variation of seasonal altimetric grading and large fow in the rainy pe- riod, infuenced by the rainfall regime, with efects upon zooplankton assemblage. As a whole, 24 species were registered: 12 Rotifera, 8 Cladocera and 4 Copepoda. Data showed that the hypothesis formulated must be rejected, due the variation trends of zooplankton environmental attributes not being regular, with relatively high abundance values for a lotic environment in specifc months, and low organism abundance or absence in other months. Those facts can be attributed to pollution efects conducting to low dissolved oxygen concentration (> 4mg.l-1) in some months, which causes the zooplankton community to be very much afected. [K]

Bryconamericus turiuba, a new species from the upper Rio Paraná system (Ostariophysi: Characiformes)

Bryconamericus turiuba, new species, is described from the upper Rio Paraná system in Brazil. It differs from all congeners in the following combination of characters: 15-20 branched anal-fin rays; four or five scales in a transverse series from the dorsal-fin origin to the lateral line; shallow body (depth 23.6-30.6% of SL); 37-43 perforated lateral line scales; first, third, and fifth or, more rarely, first and fourth outer premaxillary tricuspid teeth projecting anteriorly; two to five tricuspid to pentacuspid maxillary teeth; dentary with three or four tricuspid or pentacuspid large teeth, followed by five to seven smaller conical to tricuspid teeth; a conspicuous dark, vertically elongate humeral spot, extending to below the lateral line; a dark dorsal stripe extending from the supraoccipital spine to the caudal peduncle with a gap at the adipose-fin base; caudal-fin lobes without conspicuous markings, uniformly pigmented along rays; mature males lacking hooks on the pelvic- and anal-fin rays. The new species is compared with the Bryconamericus species described from the basins of the Rio Paraná, Rio Paraguay, Rio São Francisco, and coastal Brazilian rivers. © 2005 by the American Society of Ichthyologists and Herpetologists.

Can DNA barcoding accurately discriminate megadiverse Neotropical freshwater fish fauna?

Background: The megadiverse Neotropical freshwater ichthyofauna is the richest in the world with approximately 6,000 recognized species. Interestingly, they are distributed among only 17 orders, and almost 80% of them belong to only three orders: Characiformes, Siluriformes and Perciformes. Moreover, evidence based on molecular data has shown that most of the diversification of the Neotropical ichthyofauna occurred recently. These characteristics make the taxonomy and identification of this fauna a great challenge, even when using molecular approaches. In this context, the present study aimed to test the effectiveness of the barcoding methodology (COI gene) to identify the mega diverse freshwater fish fauna from the Neotropical region. For this purpose, 254 species of fishes were analyzed from the Upper Parana River basin, an area representative of the larger Neotropical region.Results: Of the 254 species analyzed, 252 were correctly identified by their barcode sequences (99.2%). The main K2P intra- and inter-specific genetic divergence values (0.3% and 6.8%, respectively) were relatively low compared with similar values reported in the literature, reflecting the higher number of closely related species belonging to a few higher taxa and their recent radiation. Moreover, for 84 pairs of species that showed low levels of genetic divergence (<2%), application of a complementary character-based nucleotide diagnostic approach proved useful in discriminating them. Additionally, 14 species displayed high intra-specific genetic divergence (>2%), pointing to at least 23 strong candidates for new species.Conclusions: Our study is the first to examine a large number of freshwater fish species from the Neotropical area, including a large number of closely related species. The results confirmed the efficacy of the barcoding methodology to identify a recently radiated, megadiverse fauna, discriminating 99.2% of the analyzed species. The power of the barcode sequences to identify species, even with low interspecific divergence, gives us an idea of the distribution of inter-specific genetic divergence in these megadiverse fauna. The results also revealed hidden genetic divergences suggestive of reproductive isolation and putative cryptic speciation in some species (23 candidates for new species). Finally, our study constituted an important contribution to the international Barcoding of Life (iBOL.org) project, providing barcode sequences for use in identification of these species by experts and non-experts, and allowing them to be available for use in other applications. © 2013 Pereira et al.; licensee BioMed Central Ltd.

Avaliação temporal do processo de introdução da espécie Cichla monoculus (Kullander & Ferreira, 2006) no reservatório de UHE Escola Mackenzie (Capivara) Rio Paranapanema

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Caracterização genética do pintado Pseudoplatystoma corruscans (Siluriformes: Pimelodidae), da Bacia Paraná-Paraguai, por marcadores moleculares do tipo microssatélite

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Estimativa de emissão de carbono por difusão CO2 e CH4 na bacia do Ji-Paraná

Pós-graduação em Geociências e Meio Ambiente - IGCE

Comunidades de helmintos parasitos de Steindachnerina insculta e Astynax fasciatus como indicadores de impacto ambiental no rio Taquari, São Paulo

Pós-graduação em Ciências Biológicas (Zoologia) - IBB

METHODOLOGY FOR AUTOMATICALLY DELIMITING PERMANENT PRESERVATION AREAS ALONG WATER COURSES - THE USE OF GIS IN THE HYDROLOGICAL BASIN OF THE SERGIPE RIVER, BRAZIL

ABSTRACT Permanent Preservation Areas (PPAs) along watercourses have been the focus of numerous studies, not only because of the fragility and ecological relevance of riverine vegetation, but also because of the inefficiency demonstrated in conforming to the legislation protecting it. One of the major difficulties encountered in terms of guaranteeing the effective conservation of these riverside areas is the absence of methodologies that can be used to define them rapidly and accurately without manually determining the widths of the rivers or assigning only uniform linear values for the entire watercourse. The present work sought to develop a spatial analysis methodology capable of automatically defining permanent preservation areas along watercourses using geographic information system (GIS) software. The present study was undertaken in the Sergipe River basin, "considering the river itself and its principal affluents. We used the database of the Digital Atlas of Hydrological Resources (SEMARH/SE), and the delimitations of the PPAs were performed using ArcGIS 10.1 and the XToolPro 9.0 extension. A total of 5,003.82 hectares of Permanent Preservation Areas were delimited along the margins of the rivers analyzed, with a margin of error of <1% in delimiting the widths of the rivers within the entire area considered. The methodology described here can be used to define PPAs efficiently, relatively rapidly, and with very small margins of error, thus representing a technological advance in terms of using GIS for land management.

Population structure of the migratory fish Prochilodus lineatus (Characiformes) from rio Grande basin (Brazil), an area fragmented by dams

1. Prochilodus lineatus (Prochilodontidae, Characiformes) is a migratory species of great economic importance both in fisheries and aquaculture that is found throughout the Jacui, Paraiba do Sul, Parana, Paraguay and Uruguay river basins in South America. Earlier population studies of P. lineatus in the rio Grande basin (Parana basin) indicated the existence of a single population; however, the range of this species has been fragmented by the construction of several dams. Such dams modified the environmental conditions and could have constrained the reproductive migration of P. lineatus, possibly leading to changes in the population genetic structure. 2. In order to evaluate how genetic diversity is allocated in the rio Grande basin, 141 specimens of P. lineatus from eight collection sites were analysed using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) with 15 restriction enzymes. 3. Forty-six haplotypes were detected, and 70% of them are restricted. The mean genetic variability indexes (h = 0.7721 and pi = 1.6%) were similar to those found in natural populations with a large effective size. Fst and Exact Test values indicated a lack of structuring among the samples, and the model of isolation by distance was tested and rejected. 4. The haplotype network indicated that this population of P. lineatus has been maintained as a single variable stock with some differences in the genetic composition (haplotypes) between samples. Indications of population expansion were detected, and this finding was supported by neutrality tests and mismatch distribution analyses. 5. The present study focused on regions between dams to serve as a parameter for further evaluations of genetic variability and the putative impact of dams and repopulation programmes in natural populations of P. lineatus. Copyright (C) 2011 John Wiley & Sons, Ltd.

Reproduction of the fish community of Passa Cinco Stream, Corumbataí River sub-basin, São Paulo State, Southeastern Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)