Desenvolvimento de interfaces gráficas para estatística Bayesiana aplicada à comparação mista de tratamentos

A partir dos avanços obtidos pela industria farmacêutica surgiram diversos medicamentos para o combate de enfermidades. Esses medicamentos possuem efeito tópico similar porém com suaves modificações em sua estrutura bioquímica, com isso a concorrência entre as industrias farmacêuticas se torna cada vez mais acirrada. Como forma de comparar a efetividade desses medicamentos, surgem diversas metodologias, com o objetivo de encontrar qual seria o melhor medicamento para uma dada situação. Uma das metodologias estudadas é a comparação mista de tratamentos, cujo objetivo é encontrar a efetividade de determinadas drogas em estudos e/ou ensaios clínicos que abordem, mesmo que de maneira indireta, os medicamentos estudados. A utilização dessa metodologia é demasiadamente complexa pois requer conhecimento de linguagens de programação em ambientes estatísticos além do domínio sobre as metodologias aplicadas a essa técnica. O objetivo principal desse estudo é a criação de uma interface gráfica que facilite a utilização do MTC para usuários que não possuam conhecimento em linguagens de programação, que seja de código aberto e multiplataforma. A expectativa é que, com essa interface, a utilização de técnicas mais abrangentes e avançadas seja facilitada, além disso, venha tornar o ensinamento sobre o tema mais facilitado para pessoas que ainda não conhecem o método

Uma técnica híbrida para geração de rotas em espaço geográfico com obstáculos.

Este trabalho está inserido no campo da Geomática e se concentra, mais especificamente, no estudo de métodos para exploração e seleção de rotas em espaços geográficos sem delimitação prévia de vias trafegáveis. As atividades que poderiam se beneficiar de estudos desse tipo estão inseridas em áreas da engenharia, logística e robótica. Buscou-se, com as pesquisas realizadas nesse trabalho, elaborar um modelo computacional capaz de consultar as informações de um terreno, explorar uma grande quantidade de rotas viáveis e selecionar aquelas rotas que oferecessem as melhores condições de trajetória entre dois pontos de um mapa. Foi construído um sistema a partir do modelo computacional proposto para validar sua eficiência e aplicabilidade em diferentes casos de estudo. Para que esse sistema fosse construído, foram combinados conceitos de sistemas baseados em agentes, lógica nebulosa e planejamento de rotas em robótica. As informações de um terreno foram organizadas, consumidas e apresentadas pelo sistema criado, utilizando mapas digitais. Todas as funcionalidades do sistema foram construídas por meio de software livre. Como resultado, esse trabalho de pesquisa disponibiliza um sistema eficiente para o estudo, o planejamento ou a simulação de rotas sobre mapas digitais, a partir de um módulo de inferência nebuloso aplicado à classificação de rotas e um módulo de exploração de rotas baseado em agentes autônomos. A perspectiva para futuras aplicações utilizando o modelo computacional apresentado nesse trabalho é bastante abrangente. Acredita-se que, a partir dos resultados alcançados, esse sistema possa ajudar a reduzir custos e automatizar equipamentos em diversas atividades humanas.

A rhetorical approach to IT diffusion: reconceptualizing the ideology-framing relationship in computerization movements

In this paper we propose rhetoric as a valuable yet underdeveloped alternative paradigm for examining IT diffusion. Building on recent developments of computerization movements theory, our rhetorical approach proposes that two central elements of the theory, framing and ideology, rather than being treated as separate can be usefully integrated. We suggest that IT diffusion can be usefully explored through examining the interrelationship of the deep structures underlying ideology and the type and sequence of rhetorical claims underpinning actors’ framing strategies. Our theoretical developments also allow us to better understand competing discourses influencing the diffusion process. These discourses reflect the ideologies and shape the framing strategies of actors in the broader field context. We illuminate our theoretical approach by drawing on the history of the diffusion of free and open source software.

Development of teaching resources for physical modelling community

Physical modelling of interesting geotechnical problems has helped clarify behaviours and failure mechanisms of many civil engineering systems. Interesting visual information from physical modelling can also be used in teaching to foster interest in geotechnical engineering and recruit young researchers to our field. With this intention, the Teaching Committee of TC2 developed a web-based teaching resources centre. In this paper, the development and organisation of the resource centre using Wordpress. Wordpress is an open-source content management system which allows user content to be edited and site administration to be controlled remotely via a built-in interface. Example data from a centrifuge test on shallow foundations which could be used for undergraduate or graduate level courses is presented and its use illustrated. A discussion on the development of wiki-style addition to the resource centre for commonly used physical model terms is also presented. © 2010 Taylor & Francis Group, London.

Quality practices and problems in free software projects

Free software and open source projects are often perceived to be of high quality. It has been suggested that the high level of quality found in some free software projects is related to the open development model which promotes peer review. While the quality of some free software projects is comparable to, if not better than, that of closed source software, not all free software projects are successful and of high quality. Even mature and successful projects face quality problems; some of these are related to the unique characteristics of free software and open source as a distributed development model led primarily by volunteers. In exploratory interviews performed with free software and open source developers, several common quality practices as well as actual quality problems have been identified. The results of these interviews are presented in this paper in order to take stock of the current status of quality in free software projects and to act as a starting point for the implementation of quality process improvement strategies.

Discrete multicomponent model for biodiesel spray combustion simulation

An important first step in spray combustion simulation is an accurate determination of the fuel properties which affects the modelling of spray formation and reaction. In a practical combustion simulation, the implementation of a multicomponent model is important in capturing the relative volatility of different fuel components. A Discrete Multicomponent (DM) model is deemed to be an appropriate candidate to model a composite fuel like biodiesel which consists of four components of fatty acid methyl esters (FAME). In this paper, the DM model is compared with the traditional Continuous Thermodynamics (CTM) model for both diesel and biodiesel. The CTM model is formulated based on mixing rules that incorporate the physical and thermophysical properties of pure components into a single continuous surrogate for the composite fuel. The models are implemented within the open-source CFD code OpenFOAM, and a semi-quantitative comparison is made between the predicted spray-combustion characteristics and optical measurements of a swirl-stabilised flame of diesel and biodiesel. The DM model performs better than the CTM model in predicting a higher magnitude of heat release rate in the top flame brush region of the biodiesel flame compared to that of the diesel flame. Using both the DM and CTM models, the simulation successfully reproduces the droplet size, volume flux, and droplet density profiles of diesel and biodiesel. The DM model predicts a longer spray penetration length for biodiesel compared to that of diesel, as seen in the experimental data. Also, the DM model reproduces a segregated biodiesel fuel vapour field and spray in which the most abundant FAME component has the longest vapour penetration. In the biodiesel flame, the relative abundance of each fuel component is found to dominate over the relative volatility in terms of the vapour species distribution and vice versa in the liquid species distribution. © 2014 Elsevier Ltd. All rights reserved.

Unified form language: A domain-specific language for weak formulations of partial differential equations

We present the Unified Form Language (UFL), which is a domain-specific language for representing weak formulations of partial differential equations with a view to numerical approximation. Features of UFL include support for variational forms and functionals, automatic differentiation of forms and expressions, arbitrary function space hierarchies formultifield problems, general differential operators and flexible tensor algebra. With these features, UFL has been used to effortlessly express finite element methods for complex systems of partial differential equations in near-mathematical notation, resulting in compact, intuitive and readable programs. We present in this work the language and its construction. An implementation of UFL is freely available as an open-source software library. The library generates abstract syntax tree representations of variational problems, which are used by other software libraries to generate concrete low-level implementations. Some application examples are presented and libraries that support UFL are highlighted. © 2014 ACM.

QtUCP-A program for determining unit-cell parameters in electron diffraction experiments using double-tilt and rotation-tilt holders

A computer program, QtUCP, has been developed based on several well-established algorithms using GCC 4.0 and Qt (R) 4.0 (Open Source Edition) under Debian GNU/Linux 4.0r0. it can determine the unit-cell parameters from an electron diffraction tilt series obtained from both double-tilt and rotation-tilt holders. In this approach, two or more primitive cells of the reciprocal lattice are determined from experimental data, in the meantime, the measurement errors of the tilt angles are checked and minimized. Subsequently, the derived primitive cells are converted into the reduced form and then transformed into the reduced direct primitive cell. Finally all the patterns are indexed and the least-squares refinement is employed to obtain the optimized results of the lattice parameters. Finally, two examples are given to show the application of the program, one is based on the experiment, the other is from the simulation. (C) 2008 Elsevier B.V. All rights reserved.

VCSTalk:基于DEA的开源软件开发人员效率评价工具

介绍了VCSTalk的具体设计和实现架构,并展示了它用于评价若干开源软件项目中的开发人员效率的一个具体实例.

一种开放源代码的网络仿真器的原理与实现

随着互联网的飞速发展,网络拥塞已经成为一个十分重要的问题,网络仿真是一种检测拥塞控制算法有效性的常用方法.该文给出了一种开放源代码的网络仿真器NS2(Network Simulator V2)的原理与实现.首先比较了四种不同仿真器的优缺点,然后详细描述了NS2的模块组成、工作环境、主代码结构以及扩展方法等,最后用RED(Random EarlyDetection)队列调度和移动IP数据传输两个典型实例说明了NS2的应用价值.

The Application of Toolkit of Optimization in Designs of Accelerator Magnets

The traditional design of accelerator magnet usually involves many time consuming iterations of the manual analysis process. A software platform to do these iterations automatically is proposed in this paper. In this platform, we use DAKOTA (a open source software developed by Sandia National Laboratories) as the optimizing routine, which provides a variety of optimization methods and algorithms, and OPERA (software from Vector Fields) is selected as the electromagnetic simulating routine. In this paper, two examples of designs of accelerator magnets are used to illustrate how an optimization algorithm is chosen and the platform works.

data transformation and attribute subset selection: do they help make differences in software failure prediction?

IEEE, IEEE Comp Soc, Tech Council Software Engn

an empirical study on bug assignment automation using chinese bug data

Univ SE Calif, Ctr Syst & Software Engn, ABB, Microsoft Res, IEEE, ACMSIGSOFT, N Carolina State Univ Comp Sci

DSpace Manual: Software version 1.5

DSpace is an open source software platform that enables organizations to: - Capture and describe digital material using a submission workflow module, or a variety of programmatic ingest options - Distribute an organization's digital assets over the web through a search and retrieval system - Preserve digital assets over the long term This system documentation includes a functional overview of the system, which is a good introduction to the capabilities of the system, and should be readable by nontechnical personnel. Everyone should read this section first because it introduces some terminology used throughout the rest of the documentation. For people actually running a DSpace service, there is an installation guide, and sections on configuration and the directory structure. Note that as of DSpace 1.2, the administration user interface guide is now on-line help available from within the DSpace system. Finally, for those interested in the details of how DSpace works, and those potentially interested in modifying the code for their own purposes, there is a detailed architecture and design section.

KInNeSS: A Modular Framework for Computational Neuroscience

Making use of very detailed neurophysiological, anatomical, and behavioral data to build biological-realistic computational models of animal behavior is often a difficult task. Until recently, many software packages have tried to resolve this mismatched granularity with different approaches. This paper presents KInNeSS, the KDE Integrated NeuroSimulation Software environment, as an alternative solution to bridge the gap between data and model behavior. This open source neural simulation software package provides an expandable framework incorporating features such as ease of use, scalabiltiy, an XML based schema, and multiple levels of granularity within a modern object oriented programming design. KInNeSS is best suited to simulate networks of hundreds to thousands of branched multu-compartmental neurons with biophysical properties such as membrane potential, voltage-gated and ligand-gated channels, the presence of gap junctions of ionic diffusion, neuromodulation channel gating, the mechanism for habituative or depressive synapses, axonal delays, and synaptic plasticity. KInNeSS outputs include compartment membrane voltage, spikes, local-field potentials, and current source densities, as well as visualization of the behavior of a simulated agent. An explanation of the modeling philosophy and plug-in development is also presented. Further developement of KInNeSS is ongoing with the ultimate goal of creating a modular framework that will help researchers across different disciplines to effecitively collaborate using a modern neural simulation platform.