Colonização bacteriana na região marginal de restaurações cerâmicas: efeito do método de remoção do cimento e do polimento

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Cytogenetic and molecular analyses in troglobitic and epigean species of Pimelodella (Siluriformes: Heptapteridae) from Brazil

Samples from seven different locations of the genus Pimelodella were genetically examined, two caves (exclusively subterranean, upper Tocantins River and Sao Francisco River) and five epigean (from upper Parana River basin). Cytogenetic analyses revealed the same diploid number (2n=46) for all species besides similarities in both number and location of nucleolar organizer regions and C bands. FISH with 5S rDNA probes and CMA(3) staining indicated significant differences among the studied species. Application of PCR-RFLP in ATPase 6 and 8 mitochondrial genes allowed building a minimum evolution phenogram identifying the close evolutionary relationship among groups. Both chromosomal and molecular data were useful to infer the relationships among studied Pimelodella species.

Trypanosoma livingstonei: a new species from African bats supports the bat seeding hypothesis for the Trypanosoma cruzi clade

Abstract Background Bat trypanosomes have been implicated in the evolutionary history of the T. cruzi clade, which comprises species from a wide geographic and host range in South America, Africa and Europe, including bat-restricted species and the generalist agents of human American trypanosomosis T. cruzi and T. rangeli. Methods Trypanosomes from bats (Rhinolophus landeri and Hipposideros caffer) captured in Mozambique, southeast Africa, were isolated by hemoculture. Barcoding was carried out through the V7V8 region of Small Subunit (SSU) rRNA and Fluorescent Fragment Length barcoding (FFLB). Phylogenetic inferences were based on SSU rRNA, glyceraldehyde phosphate dehydrogenase (gGAPDH) and Spliced Leader (SL) genes. Morphological characterization included light, scanning and transmission electron microscopy. Results New trypanosomes from bats clustered together forming a clade basal to a larger assemblage called the T. cruzi clade. Barcoding, phylogenetic analyses and genetic distances based on SSU rRNA and gGAPDH supported these trypanosomes as a new species, which we named Trypanosoma livingstonei n. sp. The large and highly polymorphic SL gene repeats of this species showed a copy of the 5S ribosomal RNA into the intergenic region. Unique morphological (large and broad blood trypomastigotes compatible to species of the subgenus Megatrypanum and cultures showing highly pleomorphic epimastigotes and long and slender trypomastigotes) and ultrastructural (cytostome and reservosomes) features and growth behaviour (when co-cultivated with HeLa cells at 37°C differentiated into trypomastigotes resembling the blood forms and do not invaded the cells) complemented the description of this species. Conclusion Phylogenetic inferences supported the hypothesis that Trypanosoma livingstonei n. sp. diverged from a common ancestral bat trypanosome that evolved exclusively in Chiroptera or switched at independent opportunities to mammals of several orders forming the clade T. cruzi, hence, providing further support for the bat seeding hypothesis to explain the origin of T. cruzi and T. rangeli.

Variação espacial e temporal da trama trófica bentônica de um ambiente costeiro à plataforma continental adjacente no Atlântico Sudoeste: análise de isótopos estáveis

A análise das razões de isótopos estáveis de carbono (δ13C) e nitrogênio (δ15N) vem sendo utilizada para identificar as fontes primárias de carbono dos ecossistemas e traçar as interações tróficas entre seus componentes. Nesse contexto, a variabilidade espacial e temporal da trama trófica bentônica da Baía de Santos e da plataforma continental interna e média, ao largo da costa sul do estado de São Paulo, Brasil (23,9-24,5°S), foi investigada durante o inverno de 2005 e o verão de 2006. A matéria orgânica particulada em suspensão (MOPS), zooplâncton, macroalgas, vegetais terrestres (C3), sedimento e 21 categorias de consumidores bentônicos foram analisados. Segundo os valores de δ13C, a MOPS foi a principal fonte primária de matéria orgânica. A análise de regressão entre os valores médios de δ15N e δ13C indicou, no inverno, semelhanças nas assinaturas isotópicas dos consumidores bentônicos entre a plataforma interna e média e diferenças entre essas e as da baía. Por outro lado, no verão, foram observadas diferenças nessas assinaturas entre a baía, a plataforma interna e a média. Os valores de 13C dos consumidores decresceram do ambiente costeiro em direção à plataforma média, enquanto os de 15N aumentaram. Em relação ao δ13C, houve diferença da MOPS, possivelmente pela contribuição de produção primária nova (PPN) ou do microfitobentos no verão. Quanto ao δ15N, o enriquecimento da mesma categoria trófica no gradiente ambiental pode ser devido às diferenças na MOPS, resultante da PPN na plataforma interna no verão, decorrente da entrada da Água Central do Atlântico Sul (ACAS), que enriquece a água oligotrófica nessa área

Trypanosoma livingstonei: a new species from African bats supports the bat seeding hypothesis for the Trypanosoma cruzi clade

BACKGROUND: Bat trypanosomes have been implicated in the evolutionary history of the T. cruzi clade, which comprises species from a wide geographic and host range in South America, Africa and Europe, including bat-restricted species and the generalist agents of human American trypanosomosis T. cruzi and T. rangeli. METHODS: Trypanosomes from bats (Rhinolophus landeri and Hipposideros caffer) captured in Mozambique, southeast Africa, were isolated by hemoculture. Barcoding was carried out through the V7V8 region of Small Subunit (SSU) rRNA and Fluorescent Fragment Length barcoding (FFLB). Phylogenetic inferences were based on SSU rRNA, glyceraldehyde phosphate dehydrogenase (gGAPDH) and Spliced Leader (SL) genes. Morphological characterization included light, scanning and transmission electron microscopy. RESULTS: New trypanosomes from bats clustered together forming a clade basal to a larger assemblage called the T. cruzi clade. Barcoding, phylogenetic analyses and genetic distances based on SSU rRNA and gGAPDH supported these trypanosomes as a new species, which we named Trypanosoma livingstonei n. sp. The large and highly polymorphic SL gene repeats of this species showed a copy of the 5S ribosomal RNA into the intergenic region. Unique morphological (large and broad blood trypomastigotes compatible to species of the subgenus Megatrypanum and cultures showing highly pleomorphic epimastigotes and long and slender trypomastigotes) and ultrastructural (cytostome and reservosomes) features and growth behaviour (when co-cultivated with HeLa cells at 37°C differentiated into trypomastigotes resembling the blood forms and do not invaded the cells) complemented the description of this species. CONCLUSION: Phylogenetic inferences supported the hypothesis that Trypanosoma livingstonei n. sp. diverged from a common ancestral bat trypanosome that evolved exclusively in Chiroptera or switched at independent opportunities to mammals of several orders forming the clade T. cruzi, hence, providing further support for the bat seeding hypothesis to explain the origin of T. cruzi and T. rangeli.

Oxygen and Chlorophyll Distribution in the Eastern Atlantic Ocean from 0º to 35ºS.

Programa de doctorado en Oceanografía. Trabajo presentado para la obtención del Diploma de Estudios Avanzados.

2,3-Divinyl- und 2-Aryl-3-vinylindole als Bausteine zu Carbazolen und Versuche zur photochemischen und Ultraschall-induzierten 1,6-Elektrocyclisierung

Es wurden neue funktionalisierte Carbazole und anellierte Benzo[a]carbazole als potentielle pharmakologische Therapeutika durch 1,6-pi-Elektrocyclisierung auf photo-chemischem, thermischem und sonochemischem Weg synthetisiert und die Synthesemethoden der 1,6-pi-Elektrocyclisierung sowie der 2,3-Divinylindole und der 2-Aryl-3-vinylindole als entsprechende Ausgangsprodukte validiert und evaluiert. Es gelang weder das nach den Woodward-Hoffmann-Regeln erwartete primäre Cyclisierungsprodukt mit Indolochinodimethanstruktur noch die Existenz des in einer photochemischen Abfangreaktion daraus resultierenden Cycloprodukts NMR-spektroskopisch nachzuweisen, um den stereochemischen Verlauf der Cyclisierung vorherzusagen. Ergebnisse der quantenchemischen Berechnungen der Eduktmoleküle (AO-Koeffizienten der MO's, HOMO/LUMO-Energien) sowie der Übergangszustandsgeometrien der Cyclisierungen decken sich mit den experimentellen Daten. Divinyl- und 2-Aryl-3-vinylindole sind als Systeme mit Hexatriensymmetrie aufzufassen, deren Cyclisierungsverhalten sich mit den Woodward-Hoffmann-Regeln beschreiben läßt. Im Vergleich der verschiedenen 1,6-pi-Elektrocyclisierungsmethoden zeigte sich, daß die photochemische Variante eine elegante Synthesemethode darstellt, um funktionalisierte Carbazole und Benzo[a]carbazole mit unterschiedlichen pharmakologischen Aktivitäten unter schonenden Reaktionsbedingungen mit den vergleichbar höchsten Ausbeuten zu erhalten. Demgegenüber lieferten die Ultraschallreaktionen keine nachweisbaren Cyclisierungsprodukte. Die thermische Cyclisierung führte zur Gruppe der 1,2-Dihydrocarbazole. Sie bildeten sich in einer Folgereaktion durch [1,5s]-H-Verschiebung aus dem primär entstandenen Woodward-Hoffmann-Cyclisierungsprodukt. In abschließenden DNA-Bindestudien mit verschiedenen Testsystemen zeigte keine der synthetisierten Testsubstanzen DNA-Bindungsaktivität.

Lifecycle analysis for surgery instruments at a hospital

Gli strumenti chirurgici sono importanti “devices” utilizzati come supporto indi-spensabile nella cura di pazienti negli ospedali. Essi sono caratterizzati da un intero ciclo di vita che inizia convenzionalmente nello “Store”, dove gli strumenti sterilizzati sono prelevati per essere utilizzati all’interno delle sale operatorie, e termina nuovamente nello “Store”, dove gli strumenti vengono immagazzinati per essere riutilizzati in un nuovo ciclo. Può accadere che le singole fasi del ciclo subiscano ritardi rispetto ai tempi previ-sti, non assicurando, pertanto, nelle sale operatorie, il corretto numero degli stru-menti secondo i tempi programmati. Il progetto che vado ad illustrare ha come obiettivo l’ottimizzazione del ciclo degli strumenti chirurgici all’interno di un nuovo ospedale, applicando i principi della Lean philosophy ed in particolare i metodi: “Poke Yoke, 5S e tracciabilità”. Per raggiungere tale scopo, il progetto è stato articolato come segue. In un primo momento si è osservato l’intero ciclo di vita degli strumenti nei due principali ospedali di Copenhagen (Hervel e Gentofte hospital). Ciò ha permesso di rilevare gli steps del ciclo, nonché di riscontrare sul campo i principali problemi relativi al ciclo stesso quali: bassa flessiblità, decentramento dei differenti reparti di cleaning e di store rispetto alle operation theatres ed un problema nel solleva-mento degli strumenti pesanti. Raccolte le dovute informazioni, si è passati alla fase sperimentale, in cui sono stati mappati due cicli di vita differenti, utilizzando tre strumenti di analisi: • Idef0 che consente di avere una visione gerarchica del ciclo; • Value stream Mapping che permette di evidenziare i principali sprechi del ciclo; • Simulator Tecnomatix che favorisce un punto di vista dinamico dell’analisi. Il primo ciclo mappato è stato creato con il solo scopo di mettere in risalto gli steps del ciclo e alcuni problemi rincontrati all’interno degli ospedali visitati. Il secondo ciclo, invece, è stato creato in ottica Lean al fine di risolvere alcuni tra i principali problemi riscontrati nei due ospedali e ottimizzare il primo ciclo. Si ricordi, infatti, che nel secondo ciclo le principali innovazioni introdotte sono state: l’utilizzo del Barcode e Rfid Tag per identificare e tracciare la posizione degli items, l’uso di un “Automatic and Retrievial Store” per minimizzare i tempi di inserimento e prelievo degli items e infine l’utilizzo di tre tipologie di carrello, per consentire un flessibile servizio di cura. Inoltre sono state proposte delle solu-zioni “Poke-Yoke” per risolvere alcuni problemi manuali degli ospedali. Per evidenziare il vantaggio del secondo ciclo di strumenti, è stato preso in consi-derazione il parametro “Lead time”e le due simulazioni, precedentemente create, sono state confrontate. Tale confronto ha evidenziato una radicale riduzione dei tempi (nonché dei costi associati) della nuova soluzione rispetto alla prima. Alla presente segue la trattazione in lingua inglese degli argomenti oggetto di ri-cerca. Buona lettura.

Evolutionary tendencies in African Marantaceae

Die Marantaceae (550 Arten) sind eine weltweit verbreitete Familie von Stauden und Lianen aus dem Unterwuchs tropischer Tieflandregenwälder. Der morphologisch-ökologische Vergleich des basal abzweigenden Sarcophrynium-Astes mit dem in abgeleiteter Position stehenden Marantochloa-Ast, soll beispielhaft evolutionäre Muster in der Familie beleuchten. So wird in der Doktorarbeit zum ersten Mal ein Überblick über die Blütenbiologie und Phylogenie von rund 30 der 40 afrikanischen Marantaceae Arten präsentiert. Die Analysen basieren auf Daten von drei mehrmonatigen Feldaufenthalten in Gabun jeweils zwischen September und Januar. Vier Blütentypen werden beschrieben, die jeweils mit einer spezifischen Bestäubergilde verbunden sind (kleine, mittlere, große Bienen bzw. Vögel). Bestäubungsexperimente belegen, dass 18 Arten selbstkompatibel, aber nur zwei Arten autogam sind, also keine Bestäubungsvermittler benötigen. Der Fruchtansatz ist generell gering (10 -30 %). Die komplexe Synorganisation der Blüte ermöglicht in den Marantaceae einen explosiven Bestäubungsmechanismus. Um dessen ökologische Funktionalität zu verstehen, werden die Blüten von 66 Arten, alle wichtigen Äste der Marantaceae abdeckend, unter einem morphologisch-funktionalen Gesichtspunkt untersucht. Es gibt große Übereinstimmungen zwischen allen untersuchten Arten im Zusammenspiel (Synorganisation) der wichtigsten Bauelemente (Griffel, Kapuzenblatt, Schwielenblatt), die eine präzise Pollenübertragung ermöglichen. Basierend auf Daten von nrDNA (ITS, 5S) und cpDNA (trnL-F) wird für ein nahezu komplettes Artenspektrum die Phylogenie der zwei afrikanischen Äste erstellt. Hierauf werden morphologische und ökologische Merkmale sowie geographischer Verbreitungsmuster nach dem Parsimonieprinzip rekonstruiert, um so deren evolutionäre Bedeutung für die Marantaceae abschätzen zu können. Die Ergebnisse weisen auf die Beteiligung einer Vielzahl verschiedener Artbildungsfaktoren hin.

Ribosome Biogenesis and cell cycle regulation: Effect of RNA Polymerase III inhibition

In cycling cells positive stimuli like nutrient, growth factors and mitogens increase ribosome biogenesis rate and protein synthesis to ensure both growth and proliferation. In contrast, under stress situation, proliferating cells negatively modulate ribosome production to reduce protein synthesis and block cell cycle progression. The main strategy used by cycling cell to coordinate cell proliferation and ribosome biogenesis is to share regulatory elements, which participate directly in ribosome production and in cell cycle regulation. In fact, there is evidence that stimulation or inhibition of cell proliferation exerts direct effect on activity of the RNA polymerases controlling the ribosome biogenesis, while several alterations in normal ribosome biogenesis cause changes of the expression and the activity of the tumor suppressor p53, the main effector of cell cycle progression inhibition. The available data on the cross-talk between ribosome biogenesis and cell proliferation have been until now obtained in experimental model in which changes in ribosome biogenesis were obtained either by reducing the activity of the RNA polymerase I or by down-regulating the expression of the ribosomal proteins. The molecular pathways involved in the relationship between the effect of the inhibition of RNA polymerase III (Pol III) activity and cell cycle progression have been not yet investigated. In eukaryotes, RNA Polymerase III is responsible for transcription of factors involved both in ribosome assembly (5S rRNA) and rRNA processing (RNAse P and MRP).Thus, the aim of this study is characterize the effects of the down-regulation of RNA Polymerase III activity, or the specific depletion of 5S rRNA. The results that will be obtained might lead to a deeper understanding of the molecular pathway that controls the coordination between ribosome biogenesis and cell cycle, and might give useful information about the possibility to target RNA Polymerase III for cancer treatment.

Synthese von Naturstoffen mit Lacton-Strukturen großer und mittlerer Ringgröße: Ein Curvularin-Analogon und Phomol

1.1 Synthese des dreizehngliedrigen (S)-(-)-Curvularin-AnalogonsrnAus biologischen Studien ist bekannt, dass (S)-(-)-Curvularin die Tyrosin-Phosphorylierung von STAT1-Proteinen inhibiert. Die Struktur des biologischen Targets ist jedoch unbekannt. Aus diesem Grund wurde eine Variation des (S)-(-)-Curvularin-Gerüsts vorgenommen werden, indem das zwölfgliedrige Ringgerüst erweitert wurde. Das dreizehngliedrigen (S)-(-)-Curvularin-Analogons konnte aus Acetondicarbonsäuredimethylester, (S)-Hex-5-en-2-ol, und Adipinsäuremonoallylester in 11 Stufen dargestellt werden.rn1.2 PhomolrnDas zweite Ziel dieser Arbeit war die Totalsynthese von Phomol. Zunächst wurden ausgehend von D Mannitol (3S,4R)-3,4-O-Isopropyliden-dec-1-en-5-ol in sechs Stufen und (3R,4R)-3,4-Dibenzyloxy-5-hexensäure in sieben Stufen synthetisiert und anschließend unter Yamaguchi-Bedingungen verestert. Die erhaltenen Ester wurden der Ringschlussmetathese unterworfen. Hierbei entstand das gewünschte Makrolacton lediglich in Spuren, welches spektroskopisch nachgewiesen werden konnten. Daher wurden im weiteren Verlauf (3S,4S,5S)-3-(p-Methoxybenzyl)-4-(triisopropylsilyloxy)-1-decen-5-ol und (3S,4S,5R)-3-(p-Methoxyben-zyl)-4-(triisopropylsilyloxy)-1-decen-5-ol in 10 Stufen aus (+) Xylose synthetisiert. Diese Alkohole wurden mit (3R,4R)-3,4-Di-p-methoxybenzyloxy-5-hexensäure, welche analog (3R,4R)-3,4-Dibenzyloxy-5-hexensäure dargestellt wurden, unter Yamaguchi-Bedingungen verestert und anschließend Studien zur Ringschlussmetathese unterworfen. Hierbei ließ sich nur ein Diastereomer zur Reaktion bringen wodurch sich (4R,5R,8S,9S,10R,E)-4,5,8-Tri(p-methoxybenzyloxy)-10-pentyl-9-(triisopropylsilyloxy)-3,3,5,8,9,10-hexahydro-2H-oxecin-2-on bildete. Nach Spaltung des Silylethers sollte die Seitenkette an C-8 eingeführt werden, was jedoch unter verschiedenen Bedingungen nicht gelungen ist. rnDas Grundgerüst des Phomols konnte in einer 20-stufigen Synthese ausgehend von D Mannitol und (+) Xylose aufgebaut werden. rn

Implementazione del processo di miglioramento continuo nello stabilimento produttivo di Forlimpopoli di Marcegaglia S.p.A.

Questo lavoro è svolto nell’ambito di un progetto di “miglioramento continuo” avviato all’interno dello stabilimento di Forlimpopoli dell’azienda Marcegaglia S.p.A. con lo scopo di migliorare l’efficienza e le condizioni di lavoro lungo le linee produttive. L’elaborato inizia con una breve introduzione all’approccio “kaizen” di miglioramento continuo. Il secondo capitolo descrive lo stabilimento di Forlimpopoli e in particolare le tre linee pilota. Il capitolo tre descrive la pianificazione del progetto. Nel quarto capitolo si illustra a livello sia teorico che pratico l’implementazione del motodo 5S, lo strumento della lean production approntato all’organizzazione e la pulizia dell’area di lavoro. I capitoli cinque e sei trattano rispettivamente le fasi di raccolta e analisi dati, punto di partenza per definire le contromisure e le azioni di miglioramento. Nel settimo capitolo si riportano le contromisure identificate per diminuire i fermi macchina, mentre l’ottavo capitolo tratta l’applicazione della metodologia SMED sulle linee TX001 e TX003. L’ultimo capitolo riassume brevemente i risultati e le azioni svolte.

Spins, moments and radii of cd isotopes

The complex nature of the nucleon-nucleon interaction and the wide range of systems covered by the roughly 3000 known nuclides leads to a multitude of effects observed in nuclear structure. Among the most prominent ones is the occurence of shell closures at so-called ”magic numbers”, which are explained by the nuclear shell model. Although the shell model already is on duty for several decades, it is still constantly extended and improved. For this process of extension, fine adjustment and verification, it is important to have experimental data of nuclear properties, especially at crucial points like in the vicinity of shell closures. This is the motivation for the work performed in this thesis: the measurement and analysis of nuclear ground state properties of the isotopic chain of 100−130Cd by collinear laser spectroscopy.rnrnThe experiment was conducted at ISOLDE/CERN using the collinear laser spectroscopy apparatus COLLAPS. This experiment is the continuation of a run on neutral atomic cadmium from A = 106 to A = 126 and extends the measured isotopes to even more exotic species. The required gain in sensitivity is mainly achieved by using a radiofrequency cooler and buncher for background reduction and by using the strong 5s 2S1/2 → 5p 2P3/2 transition in singly ionized Cd. The latter requires a continuous wave laser system with a wavelength of 214.6 nm, which has been developed during this thesis. Fourth harmonic generation of an infrared titanium sapphire laser is achieved by two subsequent cavity-enhanced second harmonic generations, leading to the production of deep-UV laser light up to about 100 mW.rnrnThe acquired data of the Z = 48 Cd isotopes, having one proton pair less than the Z = 50 shell closure at tin, covers the isotopes from N = 52 up to N = 82 and therefore almost the complete region between the neutron shell closures N = 50 and N = 82. The isotope shifts and the hyperfine structures of these isotopes have been recorded and the magnetic dipole moments, the electric quadrupole moments, spins and changes in mean square charge radii are extracted. The obtained data reveal among other features an extremely linear behaviour of the quadrupole moments of the I = 11/2− isomeric states and a parabolic development in differences in mean square nuclear charge radii between ground and isomeric state. The development of charge radii between the shell closures is smooth, exposes a regular odd-even staggering and can be described and interpreted in the model of Zamick and Thalmi.

Radiographic technique and anatomy of the equine sacroiliac region

Radiography is part of evaluating horses with poor performance and pelvic limb lameness; however, the radiographic appearance of the sacroiliac region is poorly described. The goal of the present study was to describe the use of a simple technique to obtain radiographs of the sacroiliac region in the anesthetized horse and to describe the radiographic appearance of this region. Seventy-nine horses underwent radiography of the pelvis under general anesthesia in dorsal recumbency. During a 5s exposure time the horse was actively ventilated to blur the abdominal viscera, which allowed assessment of individual bone structures in 77 horses. A large variation in the shape of the sacral wings, their articulation with the transverse processes of L6, and the relation of the sacrum to the ilium were observed. Females had significantly narrower width of the sacral wings. Broad sacral wings and bony proliferations at the caudal aspect were commonly observed features and their size was highly correlated with gender. In males, caudal osteophytes were significantly larger than in females. Five horses had transitional or hemitransitional vertebrae. Radiography with the ventilation-induced blurring technique is a simple approach that results in diagnostic quality radiographs and delineation of the highly variable bone structures of the sacroiliac region.