Reproductive biology and moulting cycle of the crab Callinectes ornatus (Decapoda, Portunidae) from the Ubatuba region, Sao Paulo, Brazil

To investigate the reproductive biology of Callinectes ornatus gonadal and moulting cycles were studied over two consecutive years in the Ubatuba region. Six stages of gonadal development were detected in females and four in males. Observations on the number of ovigerous females, on the moulting stages of males and females, and on the percentage of individuals exhibiting mature gonads reveal a continuous reproductive cycle, the stages of which progress at different rates. These data support the hypothesis that C. ornatus shows staggered spawning, with possibly more than one annual reproductive period. A pause in growth before the terminal moult may occur in this species.

Energetic and physiological correlates of prey handling and ingestion in lizards and snakes

In this review, we summarize the energetic and physiological correlates of prey handling and ingestion in lizards and snakes. There were marked differences in the magnitude of aerobic metabolism during prey handling and ingestion between these two groups, although they show a similar pattern of variation as a function of relative prey mass. For lizards, the magnitude of aerobic metabolism during prey handling and ingestion also varied as a function of morphological specializations for a particular habitat, prey type, and behavior. For snakes, interspecific differences in aerobic metabolism during prey handling seem to be correlated with adaptations for prey capture (venom injection vs. constriction). During ingestion by snakes, differences in aerobic metabolism might be due to differences in cranial morphology, although allometric effects might be a potentially confounded effect. Anaerobic metabolism is used for prey handling and ingestion, but its relative contribution to total ATP production seems to be more pronounced in snakes than in lizards. The energetic costs of prey handling and ingestion are trivial for both groups and cannot be used to predict patterns of prey-size selection. For lizards, it seems that morphological and ecological factors set the constraints on prey handling and ingestion. For snakes, besides these two factors, the capacity of the cardio-respiratory system may also be an important factor constraining the capacity for prey handling and ingestion. © 2001 Elsevier B.V.

Relative growth, sexual maturity, and breeding season of three species of the genus Persephona (Decapoda: Brachyura: Leucosiidae): A comparative study

The relative growths of Persephona lichtensteinii, P. mediterranea, and P. punctata were investigated on the south-eastern Brazilian coast, focusing on differences in the growth rates between immature and mature phases, the onset of morphological sexual maturity, and the breeding seasons of these species. Crabs were collected every two months from January 1991 through to November 1992, from a shrimp fishing boat equipped with two otter-trawl nets. Significant differences in the patterns of body growth were observed between immature and mature phases of all three species. Changes in the growth rates of the chelipeds (males) and abdomen (females) observed for P. lichtensteinii, P. mediterranea, and P. punctata, seem to be related to the puberty moult for both sexes. Males of P. mediterranea and P. punctata reached larger mean sizes of carapace width than females, whereas no difference was recorded for P. lichtensteinii. The body size at which 50% of males attained sexual maturity was also larger in P. mediterranea and P. punctata, and smaller in P. lichtensteinii. The absence of a pronounced sexual dimorphism and the size at the onset of sexual maturity observed only for P. lichtensteinii might be explained by distinct reproductive strategies of males. The presence of ovigerous females during the entire sampling period suggests that all three species have a continuous reproduction pattern at the Ubatuba region. Future studies on the population structure, functional maturity, and mating system should improve the understanding of factors driving the biology and ecology of these species at a subtropical region. © Marine Biological Association of the United Kingdom 2013.

Quantificação econômica e energética em cultura de cana-de-açúcar na região da Alta paulista

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Farfantepenaeus brasiliensis (Crustacea : Penaeoidea): morfologia do hepatopâncreas e sua relação com os metais pesados encontrados no litoral sul do Espírito Santo

Pós-graduação em Ciências Biológicas (Biologia Celular e Molecular) - IBRC

Eficiência energética e econômica da produção de leite bovino em explorações familiares no Município de Pardinho,região de Botucatu-SP

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Distribuição e conservação de aves migratórias neárticas da ordem Charadriiformes (famílias Charadriidae e Scolopacidae) no Brasil

Apesar dos esforços de pesquisa nos últimos anos, muitos dos aspectos das migrações dos charadrídeos e escolopacídeos no Brasil permanecem desconhecidos. A maioria dos estudos em escala local ou regional revela a necessidade de uma síntese das informações em escala espacial adequada para facilitar a detecção dos grandes padrões de movimento destas espécies no país. Desta forma, esta tese teve como objetivo geral identificar os padrões de distribuição e migrações das espécies de aves das famílias Charadriidae e Scolopacidae que se reproduzem no hemisfério norte e usam o território brasileiro durante as suas migrações, visando desenvolver estratégias para a conservação do grupo. Como objetivos específicos, caracterizar as principais rotas migratórias para estas espécies; identificar as áreas críticas para a conservação utilizando os critérios propostos pela metodologia das AIAs e ACBs; avaliar o estado de conservação atual das áreas críticas para a conservação destas espécies de acordo ao Sistema Nacional de Unidades de Conservação; avaliar se as áreas críticas são parte das áreas prioritárias para a conservação da biodiversidade brasileira; aplicar os critérios da Convenção de Ramsar e da WHSRN para identificar áreas críticas para conservação destas espécies. A base de dados foi estabelecida a partir de levantamento bibliográfico; consultas às coleções científicas de museus brasileiros e estrangeiros; utilização de bases de dados de recuperações de anilhas brasileiras e norte-americanas; dados cedidos por pesquisadores do Brasil, Argentina e Estados Unidos; dados de campo coletados pessoalmente no Pantanal (MS), litoral dos estados do Maranhão e Rio Grande do Sul. Entre os principais resultados, 19 das 24 espécies possuem um conjunto importante de dados, com as demais sendo ocasionais ou com poucas informações. Há uma maior concentração de dados na região costeira do país, com menor cobertura de áreas do interior. A Amazônia Ocidental mostrou-se a menos conhecida nos aspectos abordados, embora seja a via de passagem para algumas das espécies analisadas. O litoral entre a foz do Amazonas e São Luiz, no Maranhão foi a principal área de concentração em termos numéricos. A costa do Rio Grande do Sul foi o segundo local com maior destaque nas análises. Quinze espécies foram registradas em todos os meses do ano, demonstrando que nem todos os indivíduos migram anualmente para o hemisfério norte. Considerando as rotas globais, 8 espécies utilizam a rota do Atlântico e 10 a rota do Mississipi ou do centro da América do Norte. As outras 6 possivelmente utilizam-se das duas rotas. O conhecimento na utilização das 5 rotas propostas por Antas (1983) durante a migração sul-norte indicou que algumas espécies têm registros no interior da Amazônia, período em que possivelmente seus habitats estariam inundados. O padrão de chegada na migração norte-sul no Brasil é entre agosto e outubro, com incremento a partir de setembro. A migração sul-norte ocorre entre meados de março e abril na maioria das espécies. Durante o período não reprodutivo existe um padrão de distribuição ao longo da costa utilizado por 9 espécies, outro continental para 7 espécies no interior e ainda um terceiro, difuso, encontrado em 5 espécies que se distribuem tanto na costa quanto no interior do país. Foram identificadas 260 áreas críticas importantes para as espécies avaliadas. Observou-se que 72% das ACBs identificadas estão fora do SNUC. A sobreposição das ACBs com as Áreas Prioritárias para a Conservação revelou que 46% das primeiras estão sem indicação de importância neste programa. São elegíveis para os critérios da Convenção Ramsar 69 ACBs, enquanto 65 podem ser inseridas no programa da WHSRN. Entre as principais conclusões, o conhecimento de processos biológicos fundamentais à manutenção do ciclo de vida e o curso de suas migrações anuais, de parâmetros relacionados à mudas de penas, ganho de massa corporal, razão sexual e etária das populações migrantes são aspectos ainda insuficientemente detalhados para estas espécies no Brasil, e mesmo na América do Sul, assim como a necessidade de pesquisas que possam gerar estimativas e tendências populacionais, uma vez que em escala global várias destas espécies apresentam declínio populacional.

Energética alimentar de Gracilinanus microtarsus (Didelphimorphia: Didelphidae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Temperature and thermal regime effects on the specific dynamic action of Bothrops alternatus (Serpentes, Viperidae)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Unravelling the reaction mechanism of matrix metalloproteinase 3 using QM/MM calculations

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Adopting an integrated, flexible approach to reducing the birdstrike risk from Canada geese

Canada Geese overflying the runways at London’s Heathrow Airport have been struck on eleven occasions by aircraft during the last ten years. Four of these occurred during the pre-breeding season and seven during the post moult period. A monitoring study was initiated in 1999 to evaluate the movements of geese around the airport and determine appropriate mitigation strategies to reduce the risk of birdstrike. Moult sites within 13km of the airport were identified. 4,900 moulting geese were caught and fitted with colour rings and radio-transmitters between 1999 and 2004. 2,500 visits were made to over 300 sites resulting in over 10,000 sightings of known individuals. Birds that crossed the airport approaches whilst moving between roost sites and feeding areas in newly harvested cereal crops were identified. Throughout the monitoring period efforts were made to control the risk, but by 2003 it was estimated that 10,000 bird transits of the approaches involving almost 700 individuals occurred during a 50 day period. The knowledge of the movements of ringed and tagged birds was used to inform a revised habitat management, daily roost dispersal and on-airfield bird deterrence programme in 2004. By adopting a flexible approach to management, an estimated 70% reduction in bird transits was achieved. This paper discusses the techniques used to achieve this reduction.

Administration of a murine diet supplemented with conjugated linoleic acid increases the expression and activity of hepatic uncoupling proteins

Daily intake of conjugated linoleic acid (CLA) has been shown to reduce body fat accumulation and to increase body metabolism; this latter effect has been often associated with the up-regulation of uncoupling proteins (UCPs). Here we addressed the effects of a CLA-supplemented murine diet (similar to 2 % CLA mixture, cis-9, trans-10 and trans-10, cis-12 isomers; 45 % of each isomer on alternating days) on mitochondrial energetics, UCP2 expression/activity in the liver and other associated morphological and functional parameters, in C57BL/6 mice. Diet supplementation with CLA reduced both lipid accumulation in adipose tissues and triacylglycerol plasma levels, but did not augment hepatic lipid storage. Livers of mice fed a diet supplemented with CLA showed high UCP2 mRNA levels and the isolated hepatic mitochondria showed indications of UCP activity: in the presence of guanosine diphosphate, the higher stimulation of respiration promoted by linoleic acid in mitochondria from the CLA mice was almost completely reduced to the level of the stimulation from the control mice. Despite the increased generation of reactive oxygen species through oxi-reduction reactions involving NAD(+)/NADH in the Krebs cycle, no oxidative stress was observed in the liver. In addition, in the absence of free fatty acids, basal respiration rates and the phosphorylating efficiency of mitochondria were preserved. These results indicate a beneficial and secure dose of CLA for diet supplementation in mice, which induces UCP2 overexpression and UCP activity in mitochondria while preserving the lipid composition and redox state of the liver.

Population structure and sexual maturity of the calico box crab Hepatus epheliticus Linnaeus (Brachyura, Hepatidae) from Yucatan Peninsula, Mexico

The calico box crab Hepatus epheliticus is an abundant species from shallow and continental shelf waters of the Atlantic coast of USA and Mexico. Information about population structure and sexual maturity is absent, even though this crab is caught to be used as bait for the octopus fishery in the Campeche Bank, Mexico. In order to achieve such information, a total of 768 individuals were collected from January to March 2010 through baited traps installed in the Yucatan Peninsula, Mexico. Our results showed that sex ratio is biased towards more males than females (1:0.55), contradicting to that reported in other brachyuran crabs. The absence of ovigerous females suggests that they did not enter into the traps during embryogenesis. Males reached a larger maximum size than females (64.0 +/- 6.15 and 58.4 +/- 5.60 mm carapace width, respectively). The general scheme of growth being positive allometric throughout ontogeny of both sexes. Males presented a transition phase from juveniles to adult corresponding to the puberty moult. The estimation of the onset of functional sexual maturity revealed a steady situation for the population, with 21.5 and 13.8% of males and females, respectively, morphologically immature at the time of catch. This study constitutes the first report on population structure and sexual maturity in a population of the calico box crab H. epheliticus.

Movement of NH3 through the human urea transporter B: a new gas channel

Aquaporins and Rh proteins can function as gas (CO2 and NH3) channels. The present study explores the urea, H2O, CO2, and NH3 permeability of the human urea transporter B (UT-B) (SLC14A1), expressed in Xenopus oocytes. We monitored urea uptake using [14C]urea and measured osmotic water permeability (Pf) using video microscopy. To obtain a semiquantitative measure of gas permeability, we used microelectrodes to record the maximum transient change in surface pH (∆pHS) caused by exposing oocytes to 5% CO2/33 mM HCO3- (pHS increase) or 0.5 mM NH3/NH4+ (pHS decrease). UT-B expression increased oocyte permeability to urea by >20-fold, and Pf by 8-fold vs. H2O-injected control oocytes. UT-B expression had no effect on the CO2-induced ∆pHS but doubled the NH3-induced ∆pHS. Phloretin reduced UT-B-dependent urea uptake (Jurea * ) by 45%, Pf * by 50%, and (- ∆pHS * )NH3 by 70%. p-Chloromercuribenzene sulfonate reduced Jurea * by 25%, Pf * by 30%, and (∆pHS * )NH3 by 100%. Molecular dynamics (MD) simulations of membrane-embedded models of UT-B identified the monomeric UT-B pores as the main conduction pathway for both H2O and NH3 and characterized the energetics associated with permeation of these species through the channel. Mutating each of two conserved threonines lining the monomeric urea pores reduced H2O and NH3 permeability. Our data confirm that UT-B has significant H2O permeability and for the first time demonstrate significant NH3 permeability. Thus the UTs become the third family of gas channels. Inhibitor and mutagenesis studies and results of MD simulations suggest that NH3 and H2O pass through the three monomeric urea channels in UT-B.

Theoretical studies of mononuclear non-heme iron active sites

The quantum chemical investigations presented in this thesis use hybrid density functional theory to shed light on the catalytic mechanisms of mononuclear non-heme iron oxygenases, accommodating a ferrous ion in their active sites. More specifically, the dioxygen activation process and the subsequent oxidative reactions in the following enzymes were studied: tetrahydrobiopterin-dependent hydroxylases, naphthalene 1,2-dioxygenase and α-ketoglutarate-dependent enzymes. In light of many experimental efforts devoted to the functional mimics of non-heme iron oxygenases, the reactivity of functional analogues was also examined. The computed energetics and the available experimental data served to assess the feasibility of the reaction mechanisms investigated. Dioxygen activation in tetrahydrobiopterin- and α-ketoglutarate-dependent enzymes were found to involve a high-valent iron-oxo species, which was then capable of substrate hydroxylation. In the case of naphthalene 1,2-dioxygenase, the reactivity of an iron(III)-hydroxperoxo species toward the substrate was investigated and compared to the biomimetic counterpart.