Brain surface non-rigid registration in auditory processing

Résumé: Le développement rapide de nouvelles technologies comme l'imagerie médicale a permis l'expansion des études sur les fonctions cérébrales. Le rôle principal des études fonctionnelles cérébrales est de comparer l'activation neuronale entre différents individus. Dans ce contexte, la variabilité anatomique de la taille et de la forme du cerveau pose un problème majeur. Les méthodes actuelles permettent les comparaisons interindividuelles par la normalisation des cerveaux en utilisant un cerveau standard. Les cerveaux standards les plus utilisés actuellement sont le cerveau de Talairach et le cerveau de l'Institut Neurologique de Montréal (MNI) (SPM99). Les méthodes de recalage qui utilisent le cerveau de Talairach, ou celui de MNI, ne sont pas suffisamment précises pour superposer les parties plus variables d'un cortex cérébral (p.ex., le néocortex ou la zone perisylvienne), ainsi que les régions qui ont une asymétrie très importante entre les deux hémisphères. Le but de ce projet est d'évaluer une nouvelle technique de traitement d'images basée sur le recalage non-rigide et utilisant les repères anatomiques. Tout d'abord, nous devons identifier et extraire les structures anatomiques (les repères anatomiques) dans le cerveau à déformer et celui de référence. La correspondance entre ces deux jeux de repères nous permet de déterminer en 3D la déformation appropriée. Pour les repères anatomiques, nous utilisons six points de contrôle qui sont situés : un sur le gyrus de Heschl, un sur la zone motrice de la main et le dernier sur la fissure sylvienne, bilatéralement. Evaluation de notre programme de recalage est accomplie sur les images d'IRM et d'IRMf de neuf sujets parmi dix-huit qui ont participés dans une étude précédente de Maeder et al. Le résultat sur les images anatomiques, IRM, montre le déplacement des repères anatomiques du cerveau à déformer à la position des repères anatomiques de cerveau de référence. La distance du cerveau à déformer par rapport au cerveau de référence diminue après le recalage. Le recalage des images fonctionnelles, IRMf, ne montre pas de variation significative. Le petit nombre de repères, six points de contrôle, n'est pas suffisant pour produire les modifications des cartes statistiques. Cette thèse ouvre la voie à une nouvelle technique de recalage du cortex cérébral dont la direction principale est le recalage de plusieurs points représentant un sillon cérébral. Abstract : The fast development of new technologies such as digital medical imaging brought to the expansion of brain functional studies. One of the methodolgical key issue in brain functional studies is to compare neuronal activation between individuals. In this context, the great variability of brain size and shape is a major problem. Current methods allow inter-individual comparisions by means of normalisation of subjects' brains in relation to a standard brain. A largerly used standard brains are the proportional grid of Talairach and Tournoux and the Montreal Neurological Insititute standard brain (SPM99). However, there is a lack of more precise methods for the superposition of more variable portions of the cerebral cortex (e.g, neocrotex and perisyvlian zone) and in brain regions highly asymmetric between the two cerebral hemipsheres (e.g. planum termporale). The aim of this thesis is to evaluate a new image processing technique based on non-linear model-based registration. Contrary to the intensity-based, model-based registration uses spatial and not intensitiy information to fit one image to another. We extract identifiable anatomical features (point landmarks) in both deforming and target images and by their correspondence we determine the appropriate deformation in 3D. As landmarks, we use six control points that are situated: one on the Heschl'y Gyrus, one on the motor hand area, and one on the sylvian fissure, bilaterally. The evaluation of this model-based approach is performed on MRI and fMRI images of nine of eighteen subjects participating in the Maeder et al. study. Results on anatomical, i.e. MRI, images, show the mouvement of the deforming brain control points to the location of the reference brain control points. The distance of the deforming brain to the reference brain is smallest after the registration compared to the distance before the registration. Registration of functional images, i.e fMRI, doesn't show a significant variation. The small number of registration landmarks, i.e. six, is obvious not sufficient to produce significant modification on the fMRI statistical maps. This thesis opens the way to a new computation technique for cortex registration in which the main directions will be improvement of the registation algorithm, using not only one point as landmark, but many points, representing one particular sulcus.

Estudi de les estratègies comportamentals dels gripau corredor (Bufo Calamita) a la zona semi-àrida de Mas de Melons (terme municipal de Lleida) durant l'hivern i principis de primavera del 2007

En aquest treball s’han radiomarcat, un total de 4 gripaus corredors (Bufo calamita) que posteriorment foren alliberats a la Bassa de l’Astor, per tal d’estudiar les estratègies comportamentals de l’espècie en una zona semi-àrida. Dels 4 animals alliberats, un es perdé als pocs dies, la resta foren seguits mitjançant radioseguiment uns 64 dies, entre finals d’hivern i principis de primavera del 2007. En el treball de seguiment s’anotà en cada una de les localitzacions la temperatura ambiental del moment i la freqüència a la qual emetia l’emissor. Donat que es tenien els emissors calibrats, a partir d’aquesta freqüència es podia obtenir la temperatura a la qual es trobava l’emissor, és a dir la temperatura corporal del gripau en aquest cas. Mitjançant programes estadístics s’ha pogut determinar que durant el període hivernal i principis de primavera existeix una relació estadísticament significativa entre la variació de la temperatura ambiental i la temperatura corporal dels gripaus. Aquesta relació no es dona però en el període estival. Això fa pensar que el comportament del calamita esdevé una forma de termoregulació actuant per tal d’evitar extrems crítics de temperatura i humitat. S’ha pogut determinar també que gràcies a les característiques dels refugis utilitzats en la zona d’estudi (munts de pedres o caus d’altres espècies) els gripaus aconsegueixen mantenir-se en ambients on la variació de temperatura és inferior a la variació de la temperatura exterior. Així la variació de la temperatura corporal dels gripaus és també inferior. Pel que fa als moviments entre els diferents refugis, aquests han variat en funció de cada animal. La distància mitja recorreguda en el total dels desplaçaments ha estat d’uns 185 metres lineals. Aquests desplaçaments s’han donat sempre en dies de pluja o l’endemà d’un dia de pluja.

Effect of Mechanical and Geometric Mismatching on Fatigue and Damage of Welded Joints

The future of high technology welded constructions will be characterised by higher strength materials and improved weld quality with respect to fatigue resistance. The expected implementation of high quality high strength steel welds will require that more attention be given to the issues of crack initiation and mechanical mismatching. Experiments and finite element analyses were performed within the framework of continuum damage mechanics to investigate the effect of mismatching of welded joints on void nucleation and coalescence during monotonic loading. It was found that the damage of undermatched joints mainly occurred in the sandwich layer and the damageresistance of the joints decreases with the decrease of the sandwich layer width. The damage of over-matched joints mainly occurred in the base metal adjacent to the sandwich layer and the damage resistance of the joints increases with thedecrease of the sandwich layer width. The mechanisms of the initiation of the micro voids/cracks were found to be cracking of the inclusions or the embrittled second phase, and the debonding of the inclusions from the matrix. Experimental fatigue crack growth rate testing showed that the fatigue life of under-matched central crack panel specimens is longer than that of over-matched and even-matched specimens. Further investigation by the elastic-plastic finite element analysis indicated that fatigue crack closure, which originated from the inhomogeneousyielding adjacent to the crack tip, played an important role in the fatigue crack propagation. The applicability of the J integral concept to the mismatched specimens with crack extension under cyclic loading was assessed. The concept of fatigue class used by the International Institute of Welding was introduced in the parametric numerical analysis of several welded joints. The effect of weld geometry and load condition on fatigue strength of ferrite-pearlite steel joints was systematically evaluated based on linear elastic fracture mechanics. Joint types included lap joints, angle joints and butt joints. Various combinations of the tensile and bending loads were considered during the evaluation with the emphasis focused on the existence of both root and toe cracks. For a lap joint with asmall lack-of-penetration, a reasonably large weld leg and smaller flank angle were recommended for engineering practice in order to achieve higher fatigue strength. It was found that the fatigue strength of the angle joint depended strongly on the location and orientation of the preexisting crack-like welding defects, even if the joint was welded with full penetration. It is commonly believed that the double sided butt welds can have significantly higher fatigue strength than that of a single sided welds, but fatigue crack initiation and propagation can originate from the weld root if the welding procedure results in a partial penetration. It is clearly shown that the fatigue strength of the butt joint could be improved remarkably by ensuring full penetration. Nevertheless, increasing the fatigue strength of a butt joint by increasing the size of the weld is an uneconomical alternative.

Gas exchange of the umbu tree under semi-arid conditions

A study was carried out at Embrapa Semi-Árido, Petrolina-PE, Brazil, aiming to understand the gas exchange process of the umbu tree (Spondias tuberosa Arr. Cam.) in the dry and rainy seasons. Stomatal conductance, transpiration, photosynthesis and internal CO2 concentration were obtained with a portable infrared gas analyzer (IRGA). During the dry season the umbu tree showed a much lower stomatal conductance early in the morning, as soon as the vapor pressure deficit increased, apparently affecting CO2 assimilation more than transpiration. The highest values were detected around 6:00 am but decreased to the lowest points between 10:00 am and 2:00 pm. During the rainy season, however, stomatal conductance, transpiration and photosynthesis were significantly higher, reaching the highest values between 8:00 and 10:00 am and the lowest around 2:00 pm. It was also observed at 4:00 pm, mainly during the rainy season, an increase on these variables indicating that the umbu tree exhibits a two-picked daily course of gas exchange.

Comportamento de seis variedades de pomelo (Citrus paradisi Macfad.) cultivadas sob irrigação na região semi-árida de Pernambuco

O uso da irrigação nas regiões semi-áridas do Nordeste brasileiro tem viabilizado o cultivo comercial de inúmeras fruteiras, tais como a uva, a manga, a goiaba, o coco e a banana. Outras espécies, como o pomelo, ou grapefruit, vêm sendo ainda objeto de estudos e avaliações. Uma coleção formada de 06 variedades de pomelos (Citrus paradisi), de polpas com coloração rosa-avermelhada ('Marsh Foster', 'Star Ruby', 'Rio Red' e 'Red Blush') e amarelada ('Triumph' e 'Marsh Foster Nucelar'), foi implantada em 1993 na Estação Experimental de Ibimirim, localizada no município de Ibimirim, no Vale do Rio Moxotó - região semi-árida de Pernambuco. Contando com cinco plantas por parcela, a coleção foi conduzida sob irrigação localizada e as avaliações realizadas durante três anos (2000 a 2002). Os resultados demostraram alta variabilidade na produção de frutos, tendo a variedade 'Marsh Foster Nucelar' alcançado a produção média de 135,0 kg/planta, enquanto a 'Star Ruby' atingiu apenas 31,0 kg/planta. O peso médio dos frutos variou de 285,5g ('Red Blush') até um máximo de 401,6g na variedade 'Triumph'. O volume de suco extraído, os sólidos solúveis totais (SST), a acidez total titulável (ATT) e a relação SSS/ATT também apresentaram mudanças entre as variedades estudadas.

El Semi-Semanario Ilerdense (1822)

En este artículo se pretende analizar la prensa de la ciudad de Lleida durante el Trienio Liberal. Para ello se ha iniciado el texto introduciendo un contexto histórico marcado por la contrarrevolución realista destinada a acabar con el gobierno liberal. Para a continuación esbozar una breve caracterización de la prensa en el Trienio Liberal. Finalmente se estudian de una manera pormenorizada los ocho números del Semi-Semanario Ilerdense (1822), el único periódico editado y publicado en Lleida a lo largo del período liberal, el cual se identificó por su carácter liberal exaltado.

Efeito do ácido indolbutírico e época de coleta no enraizamento de estacas semi-lenhosas do cacaueiro

O objetivo do trabalho foi verificar o efeito do ácido indolbutírico (AIB) no enraizamento de estacas do cacaueiro. O delineamento experimental foi o inteiramente casualizado, em esquema fatorial 3 x 5 x 2, envolvendo 3 clones (Cepec 2008, CCN 51 e TSH 1188), 5 concentrações de ácido indolbutírico AIB (0; 1.000; 3.000; 6.000 e 9.000 mg kg-1), duas épocas do ano (verão e inverno),, cinco repetições e 10 estacas por parcela. A avaliação do experimento foi realizada 120 dias após o plantio e analisadas as seguintes variáveis: percentagem de sobrevivência (SOB), número de brotações (NB), matéria seca das brotações (MSB), percentagem de estacas enraizadas (ENR), número de raízes (NR) e matéria seca de raízes (MSR). Os fatores época do ano e concentração de AIB apresentaram efeito significativo para as variáveis estudadas quando isolados e em interação com os clones. Os dados obtidos possibilitaram concluir que o valor médio da concentração ideal de AIB (CI) foi de 4.169 mg kg-1 e 3.985 mg kg-1 no verão e inverno, respectivamente. Verificou-se que os clones apresentam diferentes respostas em relação à CI de AIB e época do ano. De modo geral, as CIs no verão foram maiores que no inverno. Os resultados mostraram que a época de plantio e a concentração de AIB influenciaram de maneira mais expressiva na sobrevivência e enraizamento das estacas dos clones Cepec 2008 e CCN 51 e em menor intensidade no clone TSH 1188. Existe uma concentração ideal de AIB para cada um dos clones estudados.

Stable isotopes in arid and semi-arid forest systems

El empleo de isótopos estables en el ámbito de la ecología forestal ha ido creciendo progresivamente en las últimas dos décadas. Cabe esperar que esta tendencia se mantenga en el futuro, ya que éstos aportan una visión integradora de cómo las plantas, hoy y en el pasado, han interaccionado con el medio así como con otros organismos. Su implementación es particularmente relevante en climas secos debido a la fuerte limitación de recursos que en ellos acontece. Tras una breve introducción sobre las bases teóricas de los isótopos estables en fisiología vegetal, esta revisión destaca, sobre diferentes escalas espaciales y temporales, los últimos avances en ecología forestal empleando esta metodología y con un énfasis especial en los sistemas áridos y semiáridos.

A semi-grand canonical Monte Carlo simulation model for ion binding to ionizable surfaces: Proton binding of carboxylated latex particles as a case study

In this paper, we present a computer simulation study of the ion binding process at an ionizable surface using a semi-grand canonical Monte Carlo method that models the surface as a discrete distribution of charged and neutral functional groups in equilibrium with explicit ions modelled in the context of the primitive model. The parameters of the simulation model were tuned and checked by comparison with experimental titrations of carboxylated latex particles in the presence of different ionic strengths of monovalent ions. The titration of these particles was analysed by calculating the degree of dissociation of the latex functional groups vs. pH curves at different background salt concentrations. As the charge of the titrated surface changes during the simulation, a procedure to keep the electroneutrality of the system is required. Here, two approaches are used with the choice depending on the ion selected to maintain electroneutrality: counterion or coion procedures. We compare and discuss the difference between the procedures. The simulations also provided a microscopic description of the electrostatic double layer (EDL) structure as a function of pH and ionic strength. The results allow us to quantify the effect of the size of the background salt ions and of the surface functional groups on the degree of dissociation. The non-homogeneous structure of the EDL was revealed by plotting the counterion density profiles around charged and neutral surface functional groups. © 2011 American Institute of Physics.