Promoting good practices for handling nanomaterials : an international wiki project

As production and use of nanomaterials in commercial products grow it is imperative to ensure these materials are used safely with minimal unwanted impacts on human health or the environment. Foremost among the populations of potential concern are workers who handle nanomaterials in a variety of occupational settings, including university laboratories, industrial manufacturing plants and other institutions. Knowledge about prudent practices for handling nanomaterials is being developed by many groups around the world but may be communicated in a way that is difficult for practitioners to access or use. The GoodNanoGuide is a collaborative, open-access project aimed at creating an international forum for the development and discussion of prudent practices that can be used by researchers, workers and their representatives, occupational safety professionals, governmental officials and even the public. The GoodNanoGuide is easily accessed by anyone with access to a web browser and aims to become a living repository of good practices for the nanotechnology enterprise. Interested individuals are invited to learn more about the GoodNanoGuide at http://goodnanoguide.org.

The cell cycle–regulated genes of schizosaccharomyces pombe

Many genes are regulated as an innate part of the eukaryotic cell cycle, and a complex transcriptional network helps enable the cyclic behavior of dividing cells. This transcriptional network has been studied in Saccharomyces cerevisiae (budding yeast) and elsewhere. To provide more perspective on these regulatory mechanisms, we have used microarrays to measure gene expression through the cell cycle of Schizosaccharomyces pombe (fission yeast). The 750 genes with the most significant oscillations were identified and analyzed. There were two broad waves of cell cycle transcription, one in early/mid G2 phase, and the other near the G2/M transition. The early/mid G2 wave included many genes involved in ribosome biogenesis, possibly explaining the cell cycle oscillation in protein synthesis in S.pombe. The G2/M wave included at least three distinctly regulated clusters of genes: one large cluster including mitosis, mitotic exit, and cell separation functions, one small cluster dedicated to DNA replication, and another small cluster dedicated to cytokinesis and division. S. pombe cell cycle genes have relatively long, complex promoters containing groups of multiple DNA sequence motifs, often of two, three, or more different kinds. Many of the genes, transcription factors, and regulatory mechanisms are conserved between S. pombe and S. cerevisiae. Finally, we found preliminary evidence for a nearly genome-wide oscillation in gene expression: 2,000 or more genes undergo slight oscillations in expression as a function of the cell cycle, although whether this is adaptive, or incidental to other events in the cell, such as chromatin condensation, we do not know.

The transcriptional network activated by Cln3 cyclin at the G1-to-S transition of the yeast cell cycle

Background: The G1-to-S transition of the cell cycle in the yeast Saccharomyces cerevisiae involves an extensive transcriptional program driven by transcription factors SBF (Swi4-Swi6) and MBF (Mbp1-Swi6). Activation of these factors ultimately depends on the G1 cyclin Cln3. Results: To determine the transcriptional targets of Cln3 and their dependence on SBF or MBF, we first have used DNA microarrays to interrogate gene expression upon Cln3 overexpression in synchronized cultures of strains lacking components of SBF and/or MBF. Secondly, we have integrated this expression dataset together with other heterogeneous data sources into a single probabilistic model based on Bayesian statistics. Our analysis has produced more than 200 transcription factor-target assignments, validated by ChIP assays and by functional enrichment. Our predictions show higher internal coherence and predictive power than previous classifications. Our results support a model whereby SBF and MBF may be differentially activated by Cln3. Conclusions: Integration of heterogeneous genome-wide datasets is key to building accurate transcriptional networks. By such integration, we provide here a reliable transcriptional network at the G1-to-S transition in the budding yeast cell cycle. Our results suggest that to improve the reliability of predictions we need to feed our models with more informative experimental data.

Viabilidade da cultura do morangueiro no Paraná - BR

Avaliou-se a viabilidade da exploração do morangueiro, no Paraná, em duas áreas, 0,3 ha (área média cultivada pela agricultura familiar) e 1 ha, por um ano. Elaborou-se uma planilha de fluxo de caixa a partir da qual se calcularam: Período de Recuperação do Capital (PRC), Retorno sobre Investimento (RI), Valor Presente Líquido (VPL) e Taxa Interna de Retorno (TIR). Todos para Custo Operacional Efetivo (COE), Custo Operacional Total (COT) e Custo Total de Produção (CTP). Para uma situação considerada normal, os indicadores de rentabilidade calculados foram (Tipo de custo: VPL área-padrão (TIR área- padrão) / VPL área efetiva (TIR área efetiva)) COE: US$ 17.856,55 (42%) / US$ 4.795,85 (39%); COT: US$ 5.182,40 (11%) / - US$ 1.691,97 (-13%); CPT: US$ 4.846,26 (10%) / -US$ 1.792,80 (-14%). Fez-se a análise de cenários para os fatores produtividade, preço de venda e mão de obra, analisando o VPL e a TIR. Verificou-se que o tamanho da área influenciou na viabilidade econômica, mostrando a importância de se determinar anualmente a área mínima viável para a agricultura familiar. Os resultados indicaram que a cultura é viável em curto prazo, quando considerado o COE como parâmetro de análise, mas pode não se sustentar em prazos maiores quando se consideram o COT, o CTP e a variação de alguns fatores de produção. Pela análise de cenários definidos pelos fatores de produção analisados, o VPL e a TIR alteram-se para níveis que oferecem risco à exploração.

Characterisation of COPD heterogeneity in the ECLIPSE cohort

Background Chronic obstructive pulmonary disease (COPD) is a complex condition with pulmonary and extra-pulmonary manifestations. This study describes the heterogeneity of COPD in a large and well characterised and controlled COPD cohort (ECLIPSE). Methods We studied 2164 clinically stable COPD patients, 337 smokers with normal lung function and 245 never smokers. In these individuals, we measured clinical parameters, nutritional status, spirometry, exercise tolerance, and amount of emphysema by computed tomography. Results COPD patients were slightly older than controls and had more pack years of smoking than smokers with normal lung function. Co-morbidities were more prevalent in COPD patients than in controls, and occurred to the same extent irrespective of the GOLD stage. The severity of airflow limitation in COPD patients was poorly related to the degree of breathlessness, health status, presence of co-morbidity, exercise capacity and number of exacerbations reported in the year before the study. The distribution of these variables within each GOLD stage was wide. Even in subjects with severe airflow obstruction, a substantial proportion did not report symptoms, exacerbations or exercise limitation. The amount of emphysema increased with GOLD severity. The prevalence of bronchiectasis was low (4%) but also increased with GOLD stage. Some gender differences were also identified. Conclusions The clinical manifestations of COPD are highly variable and the degree of airflow limitation does not capture the heterogeneity of the disease.

Terapeuttiset strategiat toimintaterapiaryhmässä asiakkaan oman tahdon toteuttamisen tukena

Opinnäytetyömme tarkoituksena on tarkastella terapeuttisia strategioita toimintaterapiaryhmän toteutuksen kautta (Kielhofner 2002). Etsimme vastausta kysymykseen: Minkälaiset terapeuttiset strategiat tukevat ja mahdollistavat ryhmän jäsenen oman tahdon toteuttamista? Työelämän yhteistyökumppanimme Haavikon opetus- ja aikuiskasvatuskeskus mahdollisti ryhmän toteuttamisen heidän kuudelle opiskelijalleen, joilla kaikilla on kehitysvamma. Ryhmään valikoituivat Haavikon opetus- ja aikuiskasvatuskeskuksen opiskelijoista henkilöt, joilla on vaikeutta oman tahdon toteuttamisessa. Ryhmämuotoisen toimintaterapian ohjaaviksi viitekehyksiksi olemme valinneet Inhimillisen toiminnan mallin (Kielhofner 2002), josta työssämme korostuu tahto-osa-alue sekä Terapeuttisen toimintaryhmän systeemimallin ( Borg - Bruce 1991), joka jäsentää ryhmän suunnittelua ja toteutusta. Tarkastelun kohteena olevat terapeuttiset strategiat kuuluvat Inhimillisen toiminnan malliin, ne ohjaavat terapeutin vuorovaikutusta ja ohjaamistapaa terapiatilanteessa. Opinnäytetyömme on tapaustutkielma, jossa teoria ja empiria ovat tiiviissä vuorovaikutuksessa. Aineistonkeruumme pohjaa ryhmän toteuttamiseen, jossa aineistonkeruumenetelmänä käytämme osallistuvaa havainnointia. Tahdon havainnointimenetelmän (De las Heras 1998) neljätoista arvioitavaa osa-aluetta muodostavat havainnointirungon ensimmäisen vaiheen, toisessa vaiheessa yhdeksästä terapeuttisesta strategiasta valitaan ryhmän jäsenen tuen tarpeeseen kohdennetut strategiat. Kerätty aineisto teemoitellaan teoriaohjaavan sisällönanalyysin avulla. Tuloksissa tuomme esille kunkin ryhmän jäsenen kohdalla korostuneet terapeuttiset strategiat. Johtopäätöksissä pohdimme tulosten yleistettävyyttä oman tahdon tukemisessa, terapeuttisten strategioiden ilmenemistä terapiasuhteen eri vaiheissa ja mahdollisuutta ammatilliseen kasvuun oman työskentelyn tarkastelun myötä.

The ESRg matrix for strong field d5 systems

This review has tried to collect and correlate all the various equations for the g matrix of strong field d5 systems obtained from different basis sets using full electron and hole formalism calculations. It has corrected mistakes found in the literature and shown how the failure to properly take in symmetry boundary conditions has produced a variety of apparently inconsistent equations in the literature. The review has reexamined the problem of spin-orbit interaction with excited t4e states and finds that the earlier reports that it is zero in octahedral symmetry is not correct. It has shown how redefining what x, y, and z are in the principal coordinate system simplifies, compared to previous methods, the analysis of experimental g values with the equations.

Little evidence for association between the TGFBR1*6A variant and colorectal cancer: a family-based association study on non-syndromic family members from Australia and Spain.

Genome-wide linkage studies have identified the 9q22 chromosomal region as linked with colorectal cancer (CRC) predisposition. A candidate gene in this region is transforming growth factor beta receptor 1 (TGFBR1). Investigation of TGFBR1 has focused on the common genetic variant rs11466445, a short exonic deletion of nine base pairs which results in truncation of a stretch of nine alanine residues to six alanine residues in the gene product. While the six alanine (*6A) allele has been reported to be associated with increased risk of CRC in some population based study groups this association remains the subject of robust debate. To date, reports have been limited to population-based case-control association studies, or case-control studies of CRC families selecting one affected individual per family. No study has yet taken advantage of all the genetic information provided by multiplex CRC families. Methods: We have tested for an association between rs11466445 and risk of CRC using several family-based statistical tests in a new study group comprising members of non-syndromic high risk CRC families sourced from three familial cancer centres, two in Australia and one in Spain. Results: We report a finding of a nominally significant result using the pedigree-based association test approach (PBAT; p = 0.028), while other family-based tests were non-significant, but with a p-value < 0.10 in each instance. These other tests included the Generalised Disequilibrium Test (GDT; p = 0.085), parent of origin GDT Generalised Disequilibrium Test (GDT-PO; p = 0.081) and empirical Family-Based Association Test (FBAT; p = 0.096, additive model). Related-person case-control testing using the 'More Powerful' Quasi-Likelihood Score Test did not provide any evidence for association (M-QL5; p = 0.41). Conclusions: After conservatively taking into account considerations for multiple hypothesis testing, we find little evidence for an association between the TGFBR1*6A allele and CRC risk in these families. The weak support for an increase in risk in CRC predisposed families is in agreement with recent meta-analyses of case-control studies, which estimate only a modest increase in sporadic CRC risk among 6*A allele carriers.

METODOLOGIAS DE COLETA, PRESERVAÇÃO E ARMAZENAMENTO DE AMOSTRAS DE ÁGUA PARA ANÁLISE DE MERCÚRIO - UMA REVISÃO

Knowing the mercury levels of an environment allows a diverse array of biogeochemical studies into the mercury cycle on a local or global scale. Among matrices commonly evaluated, water remains a challenge for research because its mercury levels can be very low, requiring development of complex analytical protocols. Currently, sample preservation methods, protocols that avoid contamination, and analytical techniques with low detection limits allow analysis of mercury in pristine waters. However, different protocols suggest different methods depending on a range of factors such as the characteristics of water sampled and storage time. In remote areas, such as oceanic and Amazonian regions, sample preservation and transport to a laboratory can be difficult, requiring processing of the water during the sampling expedition and the establishment of a field laboratory. Brazilian research on mercury in water can be limited due to difficulty obtaining reagents, lack of laboratory structure, qualified personnel, and financial support. Considering this complexity for analyzing water, we reviewed methodologies for sampling, preservation, and storage of water samples for analysis of the most commonly evaluated mercury species (dissolved gaseous mercury, reactive mercury, methylmercury and total mercury).

Demokraatit tienhaarassa 1972

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