Quantitative analysis of crystal/grain sizes and their distributions in 2D and 3D

We review methods to estimate the average crystal (grain) size and the crystal (grain) size distribution in solid rocks. Average grain sizes often provide the base for stress estimates or rheological calculations requiring the quantification of grain sizes in a rock's microstructure. The primary data for grain size data are either 1D (i.e. line intercept methods), 2D (area analysis) or 3D (e.g., computed tomography, serial sectioning). These data have been used for different data treatments over the years, whereas several studies assume a certain probability function (e.g., logarithm, square root) to calculate statistical parameters as the mean, median, mode or the skewness of a crystal size distribution. The finally calculated average grain sizes have to be compatible between the different grain size estimation approaches in order to be properly applied, for example, in paleo-piezometers or grain size sensitive flow laws. Such compatibility is tested for different data treatments using one- and two-dimensional measurements. We propose an empirical conversion matrix for different datasets. These conversion factors provide the option to make different datasets compatible with each other, although the primary calculations were obtained in different ways. In order to present an average grain size, we propose to use the area-weighted and volume-weighted mean in the case of unimodal grain size distributions, respectively, for 2D and 3D measurements. The shape of the crystal size distribution is important for studies of nucleation and growth of minerals. The shape of the crystal size distribution of garnet populations is compared between different 2D and 3D measurements, which are serial sectioning and computed tomography. The comparison of different direct measured 3D data; stereological data and direct presented 20 data show the problems of the quality of the smallest grain sizes and the overestimation of small grain sizes in stereological tools, depending on the type of CSD. (C) 2011 Published by Elsevier Ltd.

Produção de grãos e absorção de Cu, Fe, Mn e Zn pelo milho em solo adubado com lodo de esgoto, com e sem calcário

O lodo de esgoto (LE), apesar do seu reconhecido valor como fertilizante, ainda é motivo de preocupação quando usado na agricultura, em virtude do potencial de absorção excessiva de metais pesados pelas plantas e entrada na cadeia alimentar. Para avaliar o efeito da adição de 0, 20, 40, 60 e 80 Mg ha-1 (com base no material seco) de LE, aplicado de forma única ou parcelada em 2, 3 e 4 anos nas doses de 40, 60 e 80 Mg ha-1, respectivamente, com e sem calcário, na produção de grãos e massa seca da parte aérea e na absorção de Cu, Fe, Mn e Zn pelo milho, foi realizado, em Cordeirópolis (SP), um experimento em condições de campo, utilizando um Latossolo Vermelho distrófico típico, no período de 1983 a 1987. Foi utilizado o experimento em faixas ("split block") com quatro repetições. A maior dose de LE adicionou ao solo, em kg ha-1, 63, 3040, 25 e 152 de Cu, Fe, Mn e Zn, respectivamente. A produção de grãos e de massa seca da parte aérea aumentou linearmente com a adição de LE nos anos estudados. O LE aumentou significativamente as concentrações de Zn nas folhas e na parte aérea e provocou a redução nas concentrações de Fe e Mn, mas não alterou as de Cu. As concentrações dos metais nos grãos não foram influenciadas de forma significativa pela adição de LE, estando mesmo nas maiores doses, dentro dos níveis aceitáveis, sem causar restrição ao consumo humano. A absorção de Zn, Fe e Mn pelo milho foi significativamente reduzida pela adição de calcário. O Zn foi o metal que mais teve reduzida sua concentração na parte aérea pela adição de calcário. O parcelamento das doses de lodo de 40 a 80 Mg ha-1 provocou, de modo geral, aumento das quantidades absorvidas de metais pelo milho, sendo o Fe e o Zn os elementos que mais se acumularam na planta em resposta a esse parcelamento.

Crystal structure of yeast peroxisomal multifunctional enzyme: structural basis for substrate specificity of (3R)-hydroxyacyl-CoA dehydrogenase units.

(3R)-hydroxyacyl-CoA dehydrogenase is part of multifunctional enzyme type 2 (MFE-2) of peroxisomal fatty acid beta-oxidation. The MFE-2 protein from yeasts contains in the same polypeptide chain two dehydrogenases (A and B), which possess difference in substrate specificity. The crystal structure of Candida tropicalis (3R)-hydroxyacyl-CoA dehydrogenase AB heterodimer, consisting of dehydrogenase A and B, determined at the resolution of 2.2A, shows overall similarity with the prototypic counterpart from rat, but also important differences that explain the substrate specificity differences observed. Docking studies suggest that dehydrogenase A binds the hydrophobic fatty acyl chain of a medium-chain-length ((3R)-OH-C10) substrate as bent into the binding pocket, whereas the short-chain substrates are dislocated by two mechanisms: (i) a short-chain-length 3-hydroxyacyl group ((3R)-OH-C4) does not reach the hydrophobic contacts needed for anchoring the substrate into the active site; and (ii) Leu44 in the loop above the NAD(+) cofactor attracts short-chain-length substrates away from the active site. Dehydrogenase B, which can use a (3R)-OH-C4 substrate, has a more shallow binding pocket and the substrate is correctly placed for catalysis. Based on the current structure, and together with the structure of the 2-enoyl-CoA hydratase 2 unit of yeast MFE-2 it becomes obvious that in yeast and mammalian MFE-2s, despite basically identical functional domains, the assembly of these domains into a mature, dimeric multifunctional enzyme is very different.

Influência de diferentes sistemas de uso e manejo na coesão, resistência ao cisalhamento e óxidos de Fe, Si E Al em solo de tabuleiro costeiro de Alagoas

A tensão de cisalhamento e a coesão do solo constituem importantes propriedades físicas do solo, podendo ser influenciadas pelo sistema de manejo e óxidos de Fe, Si e Al do solo. Os efeitos de diferentes sistemas de manejo de solo cultivado com cana-de-açúcar na tensão de cisalhamento, ângulo de atrito interno, coesão do solo e nos teores de óxidos de Fe, Si e Al de um Argissolo Amarelo Coeso foram estudados em quatro áreas da Usina Triunfo, no Estado de Alagoas. Os tratamentos abrangeram: uma área irrigada, uma área não irrigada, uma com aplicação de vinhaça e uma sob floresta nativa, como condição original. Amostras foram tiradas de cada área a 0,2-0,4 m e 0,4-0,8 m de profundidade. Os sistemas sequeiro e irrigado promoveram os maiores aumentos na coesão, ângulo de atrito interno e resistência ao cisalhamento do solo. Os teores de água e de óxidos no solo influíram nos valores de coesão do solo, tendo sido os maiores valores deste atributo obtidos em solos com teores de água mais baixos e solos com maiores teores de óxidos.

Further characterisation of the 91500 zircon crystal

This paper reports the results from a second characterisation of the 91500 zircon, including data from electron probe microanalysis, laser ablation inductively coupled plasma-mass spectrometry (LA-ICP-MS), secondary ion mass spectrometry (SIMS) and laser fluorination analyses. The focus of this initiative was to establish the suitability of this large single zircon crystal for calibrating in situ analyses of the rare earth elements and oxygen isotopes, as well as to provide working values for key geochemical systems. In addition to extensive testing of the chemical and structural homogeneity of this sample, the occurrence of banding in 91500 in both backscattered electron and cathodoluminescence images is described in detail. Blind intercomparison data reported by both LA-ICP-MS and SIMS laboratories indicate that only small systematic differences exist between the data sets provided by these two techniques. Furthermore, the use of NIST SRM 610 glass as the calibrant for SIMS analyses was found to introduce little or no systematic error into the results for zircon. Based on both laser fluorination and SIMS data, zircon 91500 seems to be very well suited for calibrating in situ oxygen isotopic analyses.

CPPD crystal deposition disease in patients with rheumatoid arthritis.

The aim of this study was to assess the frequency and the outcome of patients suffering from rheumatoid arthritis in which calcium pyrophosphate dihydrate (CPPD) crystal deposits were found to coexist in synovial fluid analysis. Such association was more frequent than previously believed with CPPD crystals found in 25.8% of 93 patients with rheumatoid arthritis. As a group, a trend toward a worse outcome was suggested by more frequent prostheses of the lower limb.

Activity of phosphorus of synthetic Fe-K-P compounds in superphosphate fertilizers as affected by pH and ionic strength

The concentration of orthophosphate ions released from Fe-K-P compounds (Fe3KH8(PO4)6 .6H2O and Fe3KH14(PO4)8 .4H2O) present in superphosphates increases with pH, which initially suggests that the agronomic effectiveness of P fertilizers containing high amounts of these compounds would also increase with soil pH but studies considering activity, instead of concentration, are necessary. With this purpose, both compounds were synthesized under laboratory conditions, characterized by elemental chemical analysis, optical microscopy, X ray diffractometry, scanning electron microscopy (SEM) and energy dispersive spectroscopy (EDS), and used in a solubility study. Solutions of 0.01, 0.05 and 0.1 mol L-1 NaCl with pH adjusted to 3.0, 4.0, 5.0, 5.5, 6.0, 6.5, 7.0 and 7.5 were prepared for the solubility study of H8-syn, H14-syn and a phosphate rock (PR) from Brazil. The orthophosphate activity as H2PO4- and HPO4(2-) was calculated in each situation as related to pH and ionic strength using software MINTEQ. The remaining precipitates after equilibrium were chemically analyzed and subjected to X ray, SEM and EDS. Results of chemical analysis and instrumental techniques confirmed the preparation method. The activity of orthophosphate ions of both compounds tended to decrease under increasing pH and/or ionic strength of the solution, which in turn suggests that an increase in the solution pH does not necessarily promote an increase in the P bioavailability for plant uptake. This can be important when evaluating agronomic data of P fertilizers with high contents of these two Fe-K-P compounds.

Determinação de Fe, Zn, Cu e Mn extraídos do solo por diferentes extratores e dosados por espectrofotometria de emissão ótica em plasma induzido e espectrofotometria de absorção atômica

Para aumentar a precisão nas análises químicas de fertilidade do solo e dosar simultaneamente vários elementos, alguns laboratórios vêm optando pelo uso da técnica da espectrofotometria de emissão ótica em plasma induzido (ICP), em detrimento da técnica da espectrofotometria de absorção atômica (EAA), hoje comumente utilizada nos laboratórios de análise de solos. Este trabalho, além de comparar as duas técnicas de dosagem quanto à precisão, à reprodutibilidade e à magnitude dos teores dos micronutrientes Fe, Zn, Cu e Mn, extraídos por Mehlich-1, Mehlich-3 e DTPA-TEA, objetivou, também, selecionar os comprimentos de onda que apresentam menores interferências espectrais no ICP. Foram utilizadas 36 amostras (0 a 0,2 m) de solos coletadas nos Estados de Minas Gerais e Bahia, com ampla variação nos teores de micronutrientes, sendo selecionados três solos para definir os comprimentos de onda do ICP e avaliar a precisão e a reprodutibilidade dos métodos de dosagem. Os comprimentos de onda com menores interferências espectrais no ICP foram: 259,939 nm para Fe em Mehlich-1 e DTPA-TEA e 234,349 nm em Mehlich-3; 213,857 nm para Zn e 324,752 nm para Cu nos três extratores; e 259,372 nm para Mn em Mehlich-1 e DTPA-TEA e 260,568 nm em Mehlich-3. Tanto o ICP quanto o EAA foram precisos e reprodutíveis nas dosagens de Fe e Mn, sendo o ICP, em virtude do seu menor limite de detecção, mais preciso e reprodutível nas dosagens de Zn e Cu. Os métodos de dosagem diferiram estatisticamente (p < 0,01) pelo teste de identidade aplicado, para as dosagens de Fe, Zn, Cu e Mn, utilizando Mehlich-1, Mehlich-3 e DTPA-TEA, comprometendo assim a interpretação dos resultados gerados pelo ICP, com base nos níveis críticos gerados a partir do EAA.

Coverage effects on the magnetism of Fe/MgO(001) ultrathin films

Different aspects of the structure-magnetism and morphology-magnetism correlation in the ultrathin limit are studied in epitaxial Fe films grown on MgO(001). In the initial stages of growth the presence of substrate steps, intrinsically higher than an Fe atomic layer, prevent the connection between Fe islands and hence the formation of large volume magnetic regions. This is proposed as an explanation to the superparamagnetic nature of ultrathin Fe films grown on MgO in addition to the usually considered islanded, or Vollmer-Weber, growth. Using this model, we explain the observed transition from superparamagnetism to ferromagnetism for Fe coverages above 3 monolayers (ML). However, even though ferromagnetism and magnetocrystalline anisotropy are observed for 4 ML, complete coverage of the MgO substrate by the Fe ultrathin films only occurs around 6 ML as determined by polar Kerr spectra and simulations that consider different coverage situations. In annealed 3.5 ML Fe films, shape or configurational anisotropy dominates the intrinsic magnetocrystalline anisotropy, due to an annealing induced continuous to islanded morphological transition. A small interface anisotropy in thicker films is observed, probably due to dislocations observed at the Fe¿MgO(001) interface.

Growth, optical characterization, and laser operation of a stoichiometric crystal KYb(WO4)(2)

We present our recent achievements in the growing and optical characterization of KYb(WO4)2 (hereafter KYbW) crystals and demonstrate laser operation in this stoichiometric material. Single crystals of KYbW with optimal crystalline quality have been grown by the top-seeded-solution growth slow-cooling method. The optical anisotropy of this monoclinic crystal has been characterized, locating the tensor of the optical indicatrix and measuring the dispersion of the principal values of the refractive indices as well as the thermo-optic coefficients. Sellmeier equations have been constructed valid in the visible and near-IR spectral range. Raman scattering has been used to determine the phonon energies of KYbW and a simple physical model is applied for classification of the lattice vibration modes. Spectroscopic studies (absorption and emission measurements at room and low temperature) have been carried out in the spectral region near 1 µm characteristic for the ytterbium transition. Energy positions of the Stark sublevels of the ground and the excited state manifolds have been determined and the vibronic substructure has been identified. The intrinsic lifetime of the upper laser level has been measured taking care to suppress the effect of reabsorption and the intrinsic quantum efficiency has been estimated. Lasing has been demonstrated near 1074 nm with 41% slope efficiency at room temperature using a 0.5 mm thin plate of KYbW. This laser material holds great promise for diode pumped high-power lasers, thin disk and waveguide designs as well as for ultrashort (ps/fs) pulse laser systems.