Sedimen-water nutrient fluxes: Preliminary results of in situ measurements in Alfaques Bay, Ebro River Delta.

Sediment-water exchanges of oxygen, ammonium, nitrate, total dissolved nitrogen, phosphate and total dissolved phosphorus were measured by means of an in situ incubator of 7 1 volume and 700 cm2 base area. The incubations lasted for three hours and were done over a whole season on different kinds of sediments in Alfaques Bay. We present some preliminary results on: i) methodological aspects, ii) spatial and temporal variability of fluxes, and iii) estimates of contribution of benthic nutrient regeneration relative to total nutrient loading of the Bay. Oxygen uptake averaged 1700 mmo1 m-2 h-1 (range 200-3500); no differences were found between sandy and muddy sediments. The release of ammonia from the sediment averaged 70 mmo1 m-2 h-1 and was higher in muddy sediments than in sandy ones. Very low to null nitrate and nitrite fluxes and only small fluxes of organic nitrogen were detected. We conclude that ammonium release from sediment is the major path of nitrogen regeneration. Some sediments removed dissolved reactive phosphorus (DRP) from the water and released dissolved organic phosphorus (DOP). Additional manipulative experiments revealed DRP release under particular conditions (turbulence, anoxia). From these data, we estimate that at least 50% of the nitrogen requirements of phytoplankton in the area may be supplied by benthic remineralization.

CD3 delta establishes a functional link between the T cell receptor and CD8.

T cells expressing T cell receptor (TCR) complexes that lack CD3 delta, either due to deletion of the CD3 delta gene, or by replacement of the connecting peptide of the TCR alpha chain, exhibit severely impaired positive selection and TCR-mediated activation of CD8 single-positive T cells. Because the same defects have been observed in mice expressing no CD8 beta or tailless CD8 beta, we examined whether CD3 delta serves to couple TCR.CD3 with CD8. To this end we used T cell hybridomas and transgenic mice expressing the T1 TCR, which recognizes a photoreactive derivative of the PbCS 252-260 peptide in the context of H-2K(d). We report that, in thymocytes and hybridomas expressing the T1 TCR.CD3 complex, CD8 alpha beta associates with the TCR. This association was not observed on T1 hybridomas expressing only CD8 alpha alpha or a CD3 delta(-) variant of the T1 TCR. CD3 delta was selectively co-immunoprecipitated with anti-CD8 antibodies, indicating an avid association of CD8 with CD3 delta. Because CD8 alpha beta is a raft constituent, due to this association a fraction of TCR.CD3 is raft-associated. Cross-linking of these TCR-CD8 adducts results in extensive TCR aggregate formation and intracellular calcium mobilization. Thus, CD3 delta couples TCR.CD3 with raft-associated CD8, which is required for effective activation and positive selection of CD8(+) T cells.

Molecular identification and characterization of the Arabidopsis delta(3,5),delta(2,4)-dienoyl-coenzyme A isomerase, a peroxisomal enzyme participating in the beta-oxidation cycle of unsaturated fatty acids.

Degradation of unsaturated fatty acids through the peroxisomal beta-oxidation pathway requires the participation of auxiliary enzymes in addition to the enzymes of the core beta-oxidation cycle. The auxiliary enzyme delta(3,5),delta(2,4)-dienoyl-coenzyme A (CoA) isomerase has been well studied in yeast (Saccharomyces cerevisiae) and mammals, but no plant homolog had been identified and characterized at the biochemical or molecular level. A candidate gene (At5g43280) was identified in Arabidopsis (Arabidopsis thaliana) encoding a protein showing homology to the rat (Rattus norvegicus) delta(3,5),delta(2,4)-dienoyl-CoA isomerase, and possessing an enoyl-CoA hydratase/isomerase fingerprint as well as aspartic and glutamic residues shown to be important for catalytic activity of the mammalian enzyme. The protein, named AtDCI1, contains a peroxisome targeting sequence at the C terminus, and fusion of a fluorescent protein to AtDCI1 directed the chimeric protein to the peroxisome in onion (Allium cepa) cells. AtDCI1 expressed in Escherichia coli was shown to have delta(3,5),delta(2,4)-dienoyl-CoA isomerase activity in vitro. Furthermore, using the synthesis of polyhydroxyalkanoate in yeast peroxisomes as an analytical tool to study the beta-oxidation cycle, expression of AtDCI1 was shown to complement the yeast mutant deficient in the delta(3,5),delta(2,4)-dienoyl-CoA isomerase, thus showing that AtDCI1 is also appropriately targeted to the peroxisome in yeast and has delta(3,5),delta(2,4)-dienoyl-CoA isomerase activity in vivo. The AtDCI1 gene is expressed constitutively in several tissues, but expression is particularly induced during seed germination. Proteins showing high homology with AtDCI1 are found in gymnosperms as well as angiosperms belonging to the Monocotyledon or Dicotyledon classes.

Analisis litosismico y estructura sedimentaria de la plataforma interna al Norte del Delta del Ebro (Sector de Vandellos)

El análisis sísmico de perfiles de alta resolución del tipo ((uniboom)), realizados en la plataforma interna al N del Delta del Ebro, permite definir las unidades sísmicas y establecer la estructura sedimentaria del recubrimiento cuaternario medio/superior. Ambos aspectos reflejan la influencia diferencial de los procesos dinámicos y de las oscilaciones eustáticas.

Comportamento físico-hídrico de um podzólico vermelho-amarelo câmbico fase terraço sob diferentes sistemas de manejo

O estudo foi desenvolvido no município de Viçosa, MG, na fazenda Fundão, pertencente ao câmpus da Universidade Federal de Viçosa (UFV), com o fim de verificar o comportamento físico- hídrico de um Podzólico Vermelho-Amarelo câmbico fase terraço, sob diferentes sistemas de manejo. Foi utilizado delineamento experimental em blocos ao acaso, com cinco tratamentos e quatro repetições. Os tratamentos foram: 1 - arado de aiveca; 2 - arado de discos; 3 - grade pesada; 4 - plantio direto; 5 - testemunha, com as parcelas mantidas em pousio. Os parâmetros avaliados foram: teores de matéria orgânica; granulometria; densidade do solo; densidade de partículas; porosidade total, macroporosidade, microporosidade, agregados e curva de retenção da água no solo. Pode-se concluir que: o uso da grade pesada reduz os teores de matéria orgânica na camada de 0-15 cm; a utilização da grade pesada acarreta adensamento da camada superficial; o revolvimento do solo ocasiona maior macroporosidade; o sistema plantio direto proporciona menor desagregação do solo; o sistema plantio direto garante maior retenção de água.

Avaliação de um modelo físico de produção de bovinos no semi-árido integrando caatinga, capim-buffel e leucena.: I. fase de cria

O estudo teve como objetivo avaliar um modelo físico do sistema de cria de bovinos para as áreas mais secas do Semi-Árido brasileiro, associando a pastagem natural com pastos cultivados tolerantes à seca. A caatinga foi pastejada no período verde, e o capim buffel no restante do ano. A suplementação com leucena ocorreu no período seco, sob pastejo direto e feno no cocho. Parâmetros de desempenho, monitorados de novembro de 1991 a outubro de 1995, mostraram uma taxa média de parição da ordem de 72,8% ao ano e taxas de mortalidade praticamente nulas. O peso vivo médio dos bezerros aos 205 dias de idade foi de 153,4 kg e a produ- ção de bezerros desmamados foi de 109,5 kg/matriz exposta/ano e de 25,5 kg/hectare/ano. Os resultados são considerados bastante expressivos, considerando-se que mais da metade da área era ocupada com pastagens nativas de caatinga e que a oferta de leucena foi limitada pela ocorrência de uma forte estiagem.

Peroxisome Proliferator-Activated Receptor beta/delta in the Brain: Facts and Hypothesis.

peroxisome proliferator-activated receptors (PPARs) are nuclear receptors acting as lipid sensors. Besides its metabolic activity in peripheral organs, the PPAR beta/delta isotype is highly expressed in the brain and its deletion in mice induces a brain developmental defect. Nevertheless, exploration of PPARbeta action in the central nervous system remains sketchy. The lipid content alteration observed in PPARbeta null brains and the positive action of PPARbeta agonists on oligodendrocyte differentiation, a process characterized by lipid accumulation, suggest that PPARbeta acts on the fatty acids and/or cholesterol metabolisms in the brain. PPARbeta could also regulate central inflammation and antioxidant mechanisms in the damaged brain. Even if not fully understood, the neuroprotective effect of PPARbeta agonists highlights their potential benefit to treat various acute or chronic neurological disorders. In this perspective, we need to better understand the basic function of PPARbeta in the brain. This review proposes different leads for future researches.

Peroxisome proliferator activated receptor BETA/DELTA as a central player in the skin response to ultra-violets radiation

Previous studies in the lab of Dr. Liliane Michalik, have shown thai the nuclear hormone receptor Peroxisome Proliferator Activated Receptor beta/delta (PPARß/ö) is an important regulator of skin homeostasis, being involved in the regulation of keratinocyte differentiation, inflammation, apoptosis, arid mouse skin wound healing. Studies of PPARß/ö knock out mice have suggested a possible role for this receptor in cancer. However, contradictory observations of the role for PPARß/ö on tumor growth have been published, depending on cellular contexts and biological models. Given the controversial role of PPARß/ö in skin carcinoma development, the main aim of this PhD work has been to further explore the implication of PPARß/ö in skin response to UV and skin tumor growth. This PhD dissertation is divided in four chapters. The first chapter describes the core part of the project, where I explored the changes in miRNA expression in the skin upon chronic UV irradiation of PPARß/ö wild type and knock-out mice. This analysis shed light on a miRNA- PPARß/ö signature and also predicted thai miR-21-3p (previously named miR-21*) is a key regulator of the PPARß/ö-dependent UV response in the pre-lesiona! skin. Using mice acutely UV-irradiated, ! further demonstrated that miR-21-3p is indirectly regulated by PPARß/ö through activation of Transforming Growth Factor (TGFß)-1 under UV exposure. I also show that miR-21-3p is deregulated in human cutaneous squamous celi carcinoma. In cultured keratinocytes, application of a miR-21 -3p mimic oligonucleotide sequence leads to the regulation of lipid metabolism-related pathway. In the second chapter, I demonstrate that the usage of an mRNA/miRNA combined bioinformatics analysis leads to the discovery of important pathways involved in the PPARß/ö-miRNA response of the skin to chronic UV irradiation, indeed, I validated angiogenesis and lipid metabolism as important functions regulated by PPARß/ö in this context. In the third chapter, we demonstrate that PPARß/5 knockout mice have decreased cutaneous squamous cell carcinomas incidence compared to wild type mice and that PPARß/5 directly activates the cSrc kinase gene. In the last chapter, we review novel insights into PPAR functions in keratinocytes and liver, with emphasis on PPARß/ö but also on PPARa. In summary, this PhD study shows that i) PPARß/5 is able to regulate biological function through regulation of miRNAs, and specifically through miR-21-3p, the passenger miRNA of the oncomiR miR-21, and that ii) the PPARß/5-dependent skin response to UV involves the regulation of angiogenesis and lipid metabolism. Furthermore, the bioinformatics study highlights the relevance of performing integrated mRNA and miRNA genome-wide studies in order to better screen mRNAs and/or miRNAs of interest in the biological context of diseases. - Des études préalables dans le laboratoire du Dr. Liliane Michalik ont démontré que le récepteur nucléaire PPARß/5 est un régulateur important de l'homéostasie de la peau, étant impliqué dans la régulation de la différenciation des keratinocytes, dans l'inflammation, dans l'apoptose et dans la cicatrisation de la peau chez !a souris. L'étude de souris knock-out pour le gène PPARß/5, ont suggérées un rôle possible de ce récepteur dans le cancer. Cependant, des observations opposées ont été publiées suggérant un rôle pro- ou anti- cancer selon le tissue impliqué et le type- cellulaire. En considérant cette controverse autour du rôle de PPARß/5 dans le développement des cancers de la peau, le but principal de mon projet de recherche aura été d'approfondir l'exploration du rôle de PPARß/5 dans la réponse de la peau aux UVs et dans le développement du cancer. Cette dissertation de thèse est divisée en quatre parties. Une première partie, représentant le coeur de mon travail de recherche, décrit la découverte de l'implication des microRNAs (rniRNAs) dans la réponse aux UVs de PPARß/ö et plus spécifiquement l'implication du miRNA miR- 21 -3p (précédemment nommé miR-21*). En étudiant un modèle de souris irradiées de manière aigüe aux UVs, nous montrons que ia régulation de miR-21-3p est PPARß/ö-däpenaante et que cette régulation à lieu par l'intermédiaire du facteur de transcription TGFß-1. Dans des cultures de keratinocytes Humains, la transfecticn d'une séquence oligonucléotidique similaire à celle de miR-21-3p (mimic), montre l'implication de rniR-21-3p dans des fonctions importantes pour le développement des cancers telles que le métabolisme des lipides. Dans un second chapitre, nous montrons que l'usage d'une méthode bioinformatique combinant l'expression des ARN messagers et des miRNAs permet de mettre en évidence des fonctions biologiques importantes lors de ia réponse de PPARß/ö à l'irradiation chronique. L'angiogenèse, le stress oxydatif et le métabolisme des lipides font partie de ces fonctions régulées par PPARß/5 dans la peau irradiée aux UVs. Nous mettons également en évidence la régulation du gène LpcatS par PPARß/5 dans la peau irradiée aux UV ainsi que dans des keratinocytes humains suggérant un rôle pour PPARß/5 dans le remodelage des lipides membranaires. Dans une troisième partie, nous établissons un lien entre la régulation de l'oncogène Src et l'activation de PPARß/5 dans les carcinomes spinocellulaires de la peau. Finalement dans un quatrième chapitre, nous faisons une revue des dernières recherches portées sur le rôle de PPARß/5 et de PPARa dans le foie et ia peau. En résumé ce projet de thèse représente un avancement pour la recherche sur rimplication de PPARß/5 dans la réponse aux UVs de la peau. Pour la première fois, un lien est établi entre ce facteur de transcription et la régulation de microRNAs dans le cadre du carcinome spinocellulare. Jusqu'alors resté dans l'ombre de rniR-21-5p, miR-21-3p est en fait fortement augmenté à la fois dans un modèle de souris d'irradiation aux UVs ainsi que dans ie carcinome spinocellulare chez i'humain. De nouvelles fonctions biologiques pour PPARß/5 ont été également mises en évidence dans ce travail, comme la régulation de l'angiogenèse ou du métabolisme des lipides dans Sa peau. De plus cette dissertation valorise l'intérêt d'une association entre le travail de laboratoire et celui de la bioinformatique.

Essential role of Smad3 in the inhibition of inflammation-induced PPARbeta/delta expression.

Wound healing proceeds by the concerted action of a variety of signals that have been well identified. However, the mechanisms integrating them and coordinating their effects are poorly known. Herein, we reveal how PPARbeta/delta (PPAR: peroxisome proliferator-activated receptor) follows a balanced pattern of expression controlled by a crosstalk between inflammatory cytokines and TGF-beta1. Whereas conditions that mimic the initial inflammatory events stimulate PPARbeta/delta expression, TGF-beta1/Smad3 suppresses this inflammation-induced PPARbeta/delta transcription, as seen in the late re-epithelialization/remodeling events. This TGF-beta1/Smad3 action involves an inhibitory effect on AP-1 activity and DNA binding that results in an inhibition of the AP-1-driven induction of the PPARbeta/delta promoter. As expected from these observations, wound biopsies from Smad3-null mice showed sustained PPARbeta expression as compared to those of their wild-type littermates. Together, these findings suggest a mechanism for setting the necessary balance between inflammatory signals, which trigger PPARbeta/delta expression, and TGF-beta1/Smad3 that governs the timely decrease of this expression as wound healing proceeds to completion.

Fisiologia e produtividade do algodoeiro em solo encharcado na fase de plântula

O algodoeiro herbáceo (Gossypium hirsutum L. r. latifolium Hutch.) é uma planta considerada sensível à deficiência de oxigênio do solo. O objetivo deste trabalho foi avaliar a fisiologia e produtividade do algodoeiro cultivar CNPA 7H, em casa de vegetação, submetido à anoxia, por encharcamento do solo, na fase de plântula. Foram conduzidos dois experimentos em blocos ao acaso, com sete períodos de encharcamento e seis repetições. No encharcamento de quatro dias ocorreu uma redução na atividade da invertase de 76,69%, da beta-amilase de 77,37% e da redutase do nitrato de 51,10%. A fotossíntese foi afetada a partir do primeiro dia e alcançou decréscimo de 58,63% no décimo quarto dia de encharcamento; os carboidratos foram acumulando-se nas folhas, caule e raízes. O rendimento de algodão em caroço foi reduzido em 35,76% no décimo dia do estresse anoxítico.

Manual de la técnica de rejilla mediante el programa RECORD ver. 2.0: Capítulos I (introducció), II (Etapa de diseño) y III (Fase de administración)

La técnica de rejilla es un instrumento de evaluación de las dimensiones y estructura del significado personal que se deriva de la teoría de los constructos personales. Tanto en la versión original de G. A. Kelly (1955) como en sus continuas actualizaciones, esta técnica pretende captar la forma en que una persona da sentido a su experiencia en sus propios términos. No se trata, por tanto, de un test convencional, sino de una forma de entrevista estructurada orientada a explicitar y analizar los constructos con los que la persona organiza su mundo. De la entrevista se genera una matriz de datos que se somete a varios análisis para revelar su estructura implícita. El programa RECORD ofrece los resultados de una forma clara y proporciona además una serie de gráficos de fácil interpretación. Todo ello permite dibujar la estructura del mapa cognitivo del sujeto desde su propia semántica, culminando así, con rigor metodológico, una vieja aspiración fenomenológica. Se trata de un instrumento muy 'flexible que puede adaptarse a diversas áreas de aplicación: evaluación individual, grupal, familiar y de pareja, intervención psicoeducativa, asesoramiento vocacional, investigación de mercados, asesoramiento empresarial, investigación terapéutica, estudio de la estructura cognitiva de la personalidad, etc.

Manual de la técnica de rejilla mediante el programa RECORD ver. 2.0: Capítulos I (introducció), II (Etapa de diseño) y III (Fase de administración)

La técnica de rejilla es un instrumento de evaluación de las dimensiones y estructura del significado personal que se deriva de la teoría de los constructos personales. Tanto en la versión original de G. A. Kelly (1955) como en sus continuas actualizaciones, esta técnica pretende captar la forma en que una persona da sentido a su experiencia en sus propios términos. No se trata, por tanto, de un test convencional, sino de una forma de entrevista estructurada orientada a explicitar y analizar los constructos con los que la persona organiza su mundo. De la entrevista se genera una matriz de datos que se somete a varios análisis para revelar su estructura implícita. El programa RECORD ofrece los resultados de una forma clara y proporciona además una serie de gráficos de fácil interpretación. Todo ello permite dibujar la estructura del mapa cognitivo del sujeto desde su propia semántica, culminando así, con rigor metodológico, una vieja aspiración fenomenológica. Se trata de un instrumento muy 'flexible que puede adaptarse a diversas áreas de aplicación: evaluación individual, grupal, familiar y de pareja, intervención psicoeducativa, asesoramiento vocacional, investigación de mercados, asesoramiento empresarial, investigación terapéutica, estudio de la estructura cognitiva de la personalidad, etc.

Níveis protéicos na ração de frangos de corte na fase de crescimento

O objetivo deste trabalho foi determinar o nível mínimo de proteína bruta para atender às exigências nutricionais de frangos de corte Hubbard, machos e fêmeas, na fase de crescimento. Oitocentos e oitenta pintos machos e fêmeas de 22 a 42 dias de idade foram distribuídos ao acaso em esquema fatorial 5x2 (níveis de proteína bruta x sexos), com quatro repetições de 22 aves. Os níveis de proteína testados foram 15%, 17%, 19%, 21% e 23%. Houve efeito quadrático dos níveis de proteína no ganho de peso e na conversão alimentar dos machos. Em relação às fêmeas, o efeito foi quadrático no ganho de peso e linear na conversão. A relação entre o rendimento de carcaça e o nível de proteína bruta da ração foi linear e independente do sexo. O consumo de ração, a gordura abdominal e o rendimento de peito foram influenciados apenas pelo sexo. Recomenda-se 21,70% de proteína bruta para os machos e 19,00% para as fêmeas, na fase de crescimento.

PPAR beta/delta Agonists Modulate Platelet Function via a Mechanism Involving PPAR Receptors and Specific Association/Repression of PKC alpha-Brief Report

Objectives-Peroxisome proliferator-activated receptor beta/delta (PPAR beta/delta) is a nuclear receptor found in platelets. PPAR beta/delta agonists acutely inhibit platelet function within a few minutes of addition. As platelets are anucleated, the effects of PPAR beta/delta agonists on platelets must be nongenomic. Currently, the particular role of PPAR beta/delta receptors and their intracellular signaling pathways in platelets are not known. Methods and Results-We have used mice lacking PPAR beta/delta (PPAR beta/delta(-/-)) to show the effects of the PPAR beta/delta agonist GW501516 on platelet adhesion and cAMP levels are mediated specifically by PPAR beta/delta, however GW501516 had no PPAR beta/delta-specific effect on platelet aggregation. Studies in human platelets showed that PKC alpha, which can mediate platelet activation, was bound and repressed by PPAR beta/delta after platelets were treated with GW501516. Conclusions-These data provide evidence of a novel mechanism by which PPAR receptors influence platelet activity and thereby thrombotic risk. (Arterioscler Thromb Vasc Biol. 2009; 29: 1871-1873.)

T cell receptor delta gene rearrangement and T early alpha (TEA) expression in immature alpha beta lineage thymocytes: implications for alpha beta/gamma delta lineage commitment.

Mature T cells comprise two mutually exclusive lineages expressing heterodimeric alpha beta or gamma delta antigen receptors. During development, beta, gamma, and delta genes rearrange before alpha, and mature gamma delta cells arise in the thymus prior to alpha beta cells. The mechanism underlying commitment of immature T cells to the alpha beta or gamma delta lineage is controversial. Since the delta locus is located within the alpha locus, rearrangement of alpha genes leads to deletion of delta. We have examined the rearrangement status of the delta locus immediately prior to alpha rearrangement. We find that many thymic precursors of alpha beta cells undergo VDJ delta rearrangements. Furthermore, the same cells frequently coexpress sterile T early alpha (TEA) transcripts originating 3' of C delta and 5' of the most upstream J alpha, thus implying that individual alpha beta lineage cells undergo sequential VDJ delta and VJ alpha rearrangements. Finally, VDJ delta rearrangements in immature alpha beta cells appear to be random, supporting models in which alpha beta lineage commitment is determined independently of the rearrangement status at the TCR delta locus.