Phytoplankton size structure in the southern Bay of Bengal modified by the Summer Monsoon Current and associated eddies: Implications on the vertical biogenic flux

The present study combines field and satellite observations to investigate how hydrographical transformations influence phytoplankton size structure in the southern Bay of Bengal during the peak Southwest Monsoon/Summer Monsoon (July-August). The intrusion of the Summer Monsoon Current (SMC) into the Bay of Bengal and associated changes in sea surface chemistry, traceable eastward up to 90 degrees E along 8 degrees N, seems to influence biology of the region significantly. Both in situ and satellite (MODIS) data revealed low surface chlorophyll except in the area influenced by the SMC During the study period, two well-developed cydonic eddies (north) and an anti-cyclonic eddy (south), closely linked to the main eastward flow of the SMC, were sampled. Considering the capping effect of the low-saline surface water that is characteristic of the Bay of Bengal, the impact of the cyclonic eddy, estimated in terms of enhanced nutrients and chlorophyll, was mostly restricted to the subsurface waters (below 20 m depth). Conversely, the anti-cyclonic eddy aided by the SMC was characterized by considerably higher nutrient concentration and chlorophyll in the upper water column (upper 60 m), which was contrary to the general characteristic of such eddies. Albeit smaller phytoplankton predominated the southern Bay of Bengal (60-95% of the total chlorophyll), the contribution of large phytoplankton was double in the regions influenced by the SMC and associated eddies. Multivariate analysis revealed the extent to which SMC-associated eddies spatially influence phytoplankton community structure. The study presents the first direct quantification of the size structure of phytoplankton from the southern Bay of Bengal and demonstrates that the SMC-associated hydrographical ramifications significantly increase the phytoplankton biomass contributed by larger phytoplankton and thereby influence the vertical opal and organic carbon flux in the region. (C) 2014 Elsevier B.V. All rights reserved.

Morphology controlled synthesis of Al doped ZnO nanosheets on Al alloy substrate by low-temperature solution growth method

We report the morphology-controlled synthesis of aluminium (Al) doped zinc oxide (ZnO) nanosheets on Al alloy (AA-6061) substrate by a low-temperature solution growth method without using any external seed layer and doping process. Doped ZnO nanosheets were obtained at low temperatures of 60-90 degrees C for the growth time of 4 hours. In addition to the synthesis, the effect of growth temperature on the morphological changes of ZnO nanosheets is also reported. As-synthesized nanosheets are characterized by FE-SEM, XRD TEM and XPS for their morphology, crystallinity, microstructure and compositional analysis respectively. The doping of Al in ZnO nanosheets is confirmed with EDXS and XPS. Furthermore, the effect of growth temperature on the morphological changes was studied in the range of 50 to 95 degrees C. It was found that the thickness and height of the nanosheets varied with respect to the growth temperature. The study has given an important insight into the structural morphology with respect to the growth temperature, which in turn enabled us to determine the growth temperature window for the ZnO nanosheets. These Al doped ZnO nanosheets have potential application possibilities in gas sensors, solar cells and energy harvesting devices like nanogenerators.

Unusual Fragility and Cooperativity in Glass-Forming and Crystalline PVDF/PMMA Blends in the Presence of Multiwall Carbon Nanotubes

Poly(vinylidene fluoride) (PVDF) and poly(methyl methacrylate) (PMMA) are completely miscible below 50 wt % PVDF in the blends. In this work, an attempt was made to understand the fragility/cooperativity relation in glass-forming and crystalline blends of PVDF/PMMA and in the presence of a heteronucleating agent, multiwall carbon nanotubes (CNTs). Hence, three representative blends were chosen: a completely amorphous (10/90 by wt, PVDF/PMMA), on the verge of amorphous miscibility (50/50 by wt, PVDF/PMMA), and crystalline (60/40 by wt, PVDF/PMMA) blends. The intermolecular cooperativity/coupling, fragility, and configurational entropy near the glass transition temperature (T-g) were studied using differential scanning calorimetry (DSC) and broadband dielectric relaxation spectroscopy (DRS). It was observed that the blends with higher concentration of PMMA were more fragile (fragility index m = 141) and those with higher concentration of PVDF were more strong (m = 78). Interestingly, the coupling was less in the glass-forming blends (10/90 by wt, PVDF/PMMA) than the crystalline blends as manifested from DRS. This observation was also supported by DSC measurements which reflected that the cooperative rearranging region (CRR) existed over a smaller length scales in fragile blends as compared to strong blends, possibly due to restricted amorphous mobility. This effect was more prominent in the presence of CNTs, in particular for 50/50 (by wt) and 60/40 (by wt) PVDF/PMMA blends. Further, the configurational entropy, as manifested from DRS, decreased significantly in the strong blends in striking contrast to the fragile blends, supported by DSC, which manifested in an increase in the volume of cooperativity in the strong blends. The higher coupling in the crystalline blends can be attributed to good packing of the amorphous regions. While this is understood for crystalline blends (60/40 by wt, PVDF/PMMA), it is envisaged that enhanced dynamic heterogeneity is accountable for increased coupling in the case of blends which are on the verge of amorphous miscibility (50/50 by wt, PVDF/PMMA). The latter is also supported by broad relaxations near the T-g in DRS. Interestingly, the intermolecular coupling in the blends in the presence of CNTs has reduced, though the potential energy barrier hindering the rearrangement of CRR is lower than the blends without CNTs. In addition, the amorphous packing is not as effective as the blends without CNTs. This is manifested from reduced volume of cooperativity in particular, for 50/50 (by wt) and 60/40 (by wt) blends.

Functional characterization of heat-shock protein 90 from Oryza sativa and crystal structure of its N-terminal domain

Heat-shock protein 90 (Hsp90) is an ATP-dependent molecular chaperone that is essential for the normal functioning of eukaryotic cells. It plays crucial roles in cell signalling, cell-cycle control and in maintaining proteome integrity and protein homeostasis. In plants, Hsp90s are required for normal plant growth and development. Hsp90s are observed to be upregulated in response to various abiotic and biotic stresses and are also involved in immune responses in plants. Although there are several studies elucidating the physiological role of Hsp90s in plants, their molecular mechanism of action is still unclear. In this study, biochemical characterization of an Hsp90 protein from rice (Oryza sativa; OsHsp90) has been performed and the crystal structure of its N-terminal domain (OsHsp90-NTD) was determined. The binding of OsHsp90 to its substrate ATP and the inhibitor 17-AAG was studied by fluorescence spectroscopy. The protein also exhibited a weak ATPase activity. The crystal structure of OsHsp90-NTD was solved in complex with the nonhydrolyzable ATP analogue AMPPCP at 3.1 angstrom resolution. The domain was crystallized by cross-seeding with crystals of the N-terminal domain of Hsp90 from Dictyostelium discoideum, which shares 70% sequence identity with OsHsp90-NTD. This is the second reported structure of a domain of Hsp90 from a plant source.

Heat Shock Protein 90 regulates encystation in Entamoeba

Enteric protozoan Entamoeba histolytica is a major cause of debilitating diarrheal infection worldwide with high morbidity and mortality. Even though the clinical burden of this parasite is very high, this infection is categorized as a neglected disease. Parasite is transmitted through feco-oral route and exhibit two distinct stages namely - trophozoites and cysts. Mechanism and regulation of encystation is not clearly understood. Previous studies have established the role of Heat shock protein 90 (Hsp90) in regulating stage transition in various protozoan parasites like Giardia, Plasmodium, Leishmania, and Toxoplasma. Our study for the first time reports that Hsp90 plays a crucial role in life cycle of Entamoeba as well. We identify Hsp90 to be a negative regulator of encystation in Entamoeba. We also show that Hsp90 inhibition interferes with the process of phagocytosis in Entamoeba. Overall, we show that Hsp90 plays an important role in virulence and transmission of Entamoeba.

Synthesis of ZnO nanorods on a flexible Phynox alloy substrate: influence of growth temperature on their properties

A novel flexible alloy substrate (Phynox, 50 mm thick) was used for the synthesis of zinc oxide (ZnO) nanorods via a low-temperature solution growth method. The growth of ZnO nanorods was observed over a low temperature range of 60-90 degrees C for a growth duration of 4 hours. The as-synthesized nanorods were characterized using field-emission scanning electron microscopy (FE-SEM), X-ray diffraction (XRD), transmission electron microscopy (TEM), and X-ray photoelectron spectroscopy (XPS) for their morphology, crystallinity, microstructure and composition. The as-grown ZnO nanorods were observed to be relatively vertical to the substrate. However, the morphology of the ZnO nanorods in terms of their length, diameter and aspect ratio was found to vary with the growth temperature. The morphological variation was mainly due to the effects of the various relative growth rates observed at the different growth temperatures. The growth temperature influenced ZnO nanorods were also analyzed for their wetting (either hydrophobic or hydrophilic) properties. After carrying out multiple wetting behaviour analyses, it has been found that the as-synthesized ZnO nanorods are hydrophobic in nature. The ZnO nanorods have potential application possibilities in self-cleaning devices, sensors and actuators as well as energy harvesters such as nanogenerators.

First Structural View of a Peptide Interacting with the Nucleotide Binding Domain of Heat Shock Protein 90

The involvement of Hsp90 in progression of diseases like cancer, neurological disorders and several pathogen related conditions is well established. Hsp90, therefore, has emerged as an attractive drug target for many of these diseases. Several small molecule inhibitors of Hsp90, such as geldanamycin derivatives, that display antitumor activity, have been developed and are under clinical trials. However, none of these tested inhibitors or drugs are peptide-based compounds. Here we report the first crystal structure of a peptide bound at the ATP binding site of the N-terminal domain of Hsp90. The peptide makes several specific interactions with the binding site residues, which are comparable to those made by the nucleotide and geldanamycin. A modified peptide was designed based on these interactions. Inhibition of ATPase activity of Hsp90 was observed in the presence of the modified peptide. This study provides an alternative approach and a lead peptide molecule for the rational design of effective inhibitors of Hsp90 function.

Chemical Shifts to Metabolic Pathways: Identifying Metabolic Pathways Directly from a Single 2D NMR Spectrum

Identifying cellular processes in terms of metabolic pathways is one of the avowed goals of metabolomics studies. Currently, this is done after relevant metabolites are identified to allow their mapping onto specific pathways. This task is daunting due to the complex nature of cellular processes and the difficulty in establishing the identity of individual metabolites. We propose here a new method: ChemSMP (Chemical Shifts to Metabolic Pathways), which facilitates rapid analysis by identifying the active metabolic pathways directly from chemical shifts obtained from a single two-dimensional (2D) C-13-H-1] correlation NMR spectrum without the need for identification and assignment of individual metabolites. ChemSMP uses a novel indexing and scoring system comprised of a ``uniqueness score'' and a ``coverage score''. Our method is demonstrated on metabolic pathways data from the Small Molecule Pathway Database (SMPDB) and chemical shifts from the Human Metabolome Database (HMDB). Benchmarks show that ChemSMP has a positive prediction rate of >90% in the presence of deduttered data and can sustain the same at 60-70% even in the presence of noise, such as deletions of peaks and chemical shift deviations. The method tested on NMR data acquired for a mixture of 20 amino acids shows a success rate of 93% in correct recovery of pathways. When used on data obtained from the cell lysate of an unexplored oncogenic cell line, it revealed active metabolic pathways responsible for regulating energy homeostasis of cancer cells. Our unique tool is thus expected to significantly enhance analysis of NMIR-based metabolomics data by reducing existing impediments.

Behavior of Brick-Mortar Interfaces in FRP-Strengthened Masonry Assemblages under Normal Loading and Shear Loading

Determination of shear strength of brick-mortar bed joint is critical to overcome the sliding-shear or joint-shear failure in masonry. In the recent past, researchers have attempted to enhance the shear strength and deformation capacity of brick-mortar bed joints by gluing fiber-reinforced polymer (FRP) composite across the bed joint. FRP composites offer several advantages like high strength-to-weight ratio, and ease of application in terms of labor, time, and reduced curing period. Furthermore, FRP composites are desirable for strengthening old masonry buildings having heritage value because of its minimal interference with the existing architecture. A majority of earlier studies on shear strengthening of masonry available in the literature adopted masonry having the ratio of modulus of elasticity of masonry unit (Emu) to modulus of elasticity of mortar (Em) greater than one. Information related to shear behavior of FRP glued masonry composed of masonry units having Young's modulus lower than mortar is limited. Hence the present study is focused on characterizing the interfacial behavior of brick-mortar bed joint of masonry assemblages composed of solid burnt clay bricks and cement-sand mortar (E-mu/E-m ratio less than one), strengthened with FRP composites. Masonry triplets and prisms with bed joint inclined to loading axis (0 degrees, 30 degrees, 45 degrees, 60 degrees and 90 degrees) are employed in this study. Glass and carbon FRP composites composed of bidirectional FRP fabric with equal density in both directions are used for strengthening masonry. Masonry triplets are glued with glass and carbon FRP composites in two configurations: (1) both faces of the triplet specimens are fully glued with GFRP composites; and (2) both faces of the triplet specimens are glued with GFRP and CFRP composites in strip form. The performance of masonry assemblages strengthened with FRP composites is assessed in terms of gain in shear strength, shear displacement, and postpeak behavior for various configurations and types of FRP composites considered. A semianalytical model is proposed for the prediction of shear strength of masonry bed joints glued with FRP composites. A composite failure envelope consisting of a Coulomb friction model and a compression cap is obtained for unreinforced masonry and GFRP-strengthened masonry based on the test results of masonry triplets and masonry prisms with bed joints having various inclinations to the loading (C) 2015 American Society of Civil Engineers.

Structural Evolution and Property Changes in Nd_{60}Al_{10}Fe_{20}Co_{10} Bulk Metallic Glass During Crystallization

The structural evolution and property changes in Nd60Al10Fe20Co10 bulk metallic glass (BMG) upon crystallization are investigated by the ultrasonic method, x-ray diffraction, density measurement, and differential scanning calorimetry. The elastic constants and Debye temperature of the BMG are obtained as a function of annealing temperature. Anomalous changes in ultrasonic velocities, elastic constants, and density are observed between 600–750 K, corresponding to the formation of metastable phases as an intermediate product in the crystallization process. The changes in acoustic velocities, elastic constants, density, and Debye temperature of the BMG relative to its fully crystallized state are much smaller, compared with those of other known BMGs, the differences being attributed to the microstructural feature of the BMG.

Telomerase Activity and Microgravity-Dependent Apoptosis in Human Leukemia HL-60 Cells

Mammalian cells subjected to conditions of spaceflight and the microgravity environment ofspace; manifest a number of alterations in structure and function. Among the most notable changes incells flown on the Space Shuttle are reduced growth activation and decline in growth rate in the totalpopulation. Other changes include chromosomal aberrations, inhibited locomotion, alteredcytokine production, changes in PKC distribution, and increased apoptos.

Nd_(60)Al_(10)Fe_(20)Co_(10)金属玻璃的变形行为

利用材料测试系统(MTS)、X-Ray 衍射(XRD)和扫描电镜(SEM)等手段研究了Nd 基大块金属玻璃的变形行为和断裂特征。Nd 基大块金属玻璃样品在室温下是脆性断裂,大约在500 K 时变形模式从非均匀变形转变为均匀变形,在523 K 以上表现出显著的塑性变形。在5×10-4 m/s 的应变速率下,这种Nd 基大块金属玻璃材料在523 K~600 K 之间出现明显的屈服应力下降现象,随后进入1 种稳定的粘性流动状态,而且这种屈服下降现象与温度和应变速率有关。这种在过冷液相区的变形行为与其他大块金属玻璃变形特征相似。合金的这种塑性变形行为表明了其存在稳定的过冷液相区,同时对其变形行为的研究有助于进一步了解Nd 基大块金属玻璃的反常热稳定性。

Influencia de diferentes períodos de destete sobre peso de la hembra al destete (PHD), peso de la camada al destete (PCD) y peso de la hembra al segundo parto (PHP2) en conejas primiparas, en el municipio de Rivas

El presente ensayo se realizó con el objetivo de medir el efecto de tres períodos de destete diferentes (20, 40 y 60 días respectivamente) sobre el Peso de la hembra al destete (PHD), Peso de la camada al destete (PCD) y Peso de la hembra al segundo parto (PHP2) en conejas primíparas. Para el análisis de los datos fue utilizado un Diseño Completamente Aleatorio (D.C.A.) con 4 repeticiones (hembras primíparas) para el destete de 20 días, 5 repeticiones para el destete de 40 días y 4 repeticiones para el destete de 60 días. La información utilizada para los análisis estadísticos provino de datos recaudados en registros reproductivos, de un conejar compuesto de 13 conejas y un padrote. La edad y peso promedio de los animales al inicio del ensayo fueron homogéneos (7 meses y 3.007 Kg respectivamente). El ensayo se realizó en el municipio de Rivas ubicado a 111 km de la ciudad de Managua, a 11º 26' de latitud Norte y 85º 44' de longitud Oeste, a una elevación de 57.77 m.s.n.m. Las variables en estudio fueron: Peso de la hembra al destete (PHD), Peso de la camada al destete (PCD), Peso de la hembra al segundo parto (PHP2). Los valores y desviación estándar para dichas variables fue de : 2.94483 ± 0.3071 Kg, promedios 2.8629 ± 1.5308 Kg y 3.0635 ± 0.2212 Kg, respectivamente. En el ANDEVA realizado para las diferentes variables, el efecto de los tratamientos sobre el Peso de la hembra al destete resultó no significativo. No así, para con las variables Peso de la camada al destete (PCD) y Peso de la hembra al segundo parto (PHP2), donde el efecto de los tratamientos sobre estas fue significativo. El efecto de la covariable (Peso de la hembra al primer parto) solamente resultó significativo para la variable Peso de la hembra al destete (PHD). Mediante la Separación de medias por la Prueba de DUNCAN se obtuvieron los siguientes promedios de las variables por tratamiento; Peso de la hembra al destete (PHD): 1.3469 Kg (t: 20 días), 2.9508 Kg (t: 40 días) y 2.9194 Kg (t: 60 días). Para el Peso de la camada al destete (PCD), los valores fueron: 1.3469 kg (t: 20 días), 2.6571 Kg (t: 40 días) y 4.6363 Kg (t: 60 días). Para el Peso de la hembra al segundo parto (PHP2) los valores fueron: 3.2895 Kg (t: 20 días), 3.0030 Kg (t: 40 días) y 2.9131 Kg (t: 60 días). Con la realización del Análisis de los Costos para hembras, se determinaron valores de 105.29, 127.42 y 148.65 (córdobas), para una hembra al destete en los tratamientos de 20, 40 y 60 días de destete respectivamente. Los costos para una hembra al segundo parto fueron: C$ 130.77 (t: 20 días), C$ 147.03 (t: 40 días) y C$168.26 (t: 60 días). Para gazapo al nacimiento los costos por tratamiento fueron los siguientes: C$ 4.43 (t: 20 días), C$ 4.60 (t: 40 días) y C$ 4.87 (t 60 días. Así también, se determinaron los costos de un gazapo al destete, obteniéndose valores de C$ 7.90, C$ 11.53 y C$15.82 para los tratamientos de 20, 40 y 60 días de destete respectivamente.

Evaluación de la inclusión de yuca (Manihot esculenta cranz) y suero en la alimentación de cerdos en las etapas de desarrollo y engorde

Se realizó un experimento con 30 cerdos comerciales en las etapas de desarrollo y engorde, con una duración de 120 días (60 días por etapa) con el objetivo de evaluar el efecto de la inclusión de yuca y suero en la alimentación. Sobre consumo, ganancia medía diaria (GMD), conversión alimenticia y utilidad económica. Los cerdos fueron asignados aleatoriamente en 3 grupos de 10 cerdos cada uno, de pesos similares con 60 días de edad, utilizándose un Diseño Completo al Azar (D.C.A. ). Se encontró diferencias significativas (P<0.05) en las categorías de desarrollo y engorde en cuanto a ganancia medía diaria del tratamiento T 1 respecto a los tratamientos T2 y T3. Las raciones experimentales estaban constituidas por: T1 (testigo) concentrado comercial, T2 base (50% maíz., 50% semolina y sal) y suero y el T3 la misma base, suero y yuca. En la etapa de desarrollo los consumos de alimento, ganancia media diaria y conversión alimenticia promedio por cerdo fueron de: 63.48, 189.57 y 218.45 kg; 384.33, 174.33 y 158.33 gramos/día; 2.75, 19.95 y 20.88 para T1, T2 y T3 respectivamente. En la etapa de engorde, los consumos de alimento, ganancia media diaria y conversión alimenticia promedia por cerdo fueron de: 164.98, 343.44 y 355.87 kg; 822.03, 398.65 y 328.80 gramos/día; 3.34, 14.36 y 18.03. El análisis económico evidencia que las mejores utilidades se obtuvieron con el T2 en la etapa de engorde con C$90.61/cerdo. Se concluye que se puede suministrar raciones para la alimentación de cerdos en engorde con subproductos lácteos y agrícolas con el fin de disminuir los costos por alimento.

Producción de biomasa de nacedero (Trichanthera gigantea) en diferentes escenarios de sombra y frecuencias de cortes, en el Rancho Ebenezer, Niquinohomo, Masaya

Con el objeto de contribuir al uso y manejo de nuevas especies forrajeras como alternativas para la alimentación animal en las condiciones agroclimáticas del municipio de Niquinohomo, específicamente en el Rancho Agropecológico de Especies Menores Ebenezer (RAEME). Se realizó un trabajo investigativo donde se evaluó las características morfoestructurales de nacedero (Trichanthera gigantea), bajo tres escenarios de sombra (umbra, penumbra y a pleno sol) y cuatro frecuencias de corte (30, 60, 90 y 120 días) y su efecto sobre la producción de biomasa y contenido de proteína de nacedero. El estudio se ubicó en la comarca Hoja Chigüe #1 a una distancia de 4 Km al sur del municipio de Niquinohomo, Departamento de Masaya con una altitud de 400 msnm, con latitud de 11° 52′ y longitud de 86°03′ . El promedio de precipitación anual es de 1200 mm, con periodos lluviosos generalmente en los meses de Julio a Noviembre. Con una temperatura mínimas de 22° C y máximas de 38° C, variando estas durante todo el año. Los suelos son de textura franco arcilloso y una profundidad efectiva de 40 cm. Entre las características morfoestructurales, se evaluaron el grosor, altura, número de tallos y rebrotes, para lo cual se realizaron mediciones sobre cinco plantas (para cada condición), sembrados a una distancia de 1 m entre surco y entre planta, las cuales se seleccionaron al azar. Al iniciar el estudio se hizo un corte de uniformidad; después se realizó el corte para cada frecuencia en estudio, cuantificando la producción de forraje comestible (hoja/tallo tierno y la proporción entre ellas). Durante el ensayo no se hizo ninguna aplicación de fertilizante. Se encontró que la producción de biomasa fue mejor cuando los cortes se realizaron cada 120 días, siendo estas mayores cuando estaban en condiciones de sombra y penumbra (31 y 32 t ha-1 respectivamente). En cambio los contenidos de proteína fueron mayores cuando los corteseran menores de 60 días, los cuales fluctuaron entre 20 y 23%. Encontrándose una relación inversa entre la edad de corte y producción de biomasa con respecto al contenido de proteína.