Activity concentrations of radionuclides in 5 short cores taken in 2007-2008 measured by ICP-MS and HPGe gamma spectrometry

Natural radionuclides and man-made 137Cs were analyzed in five short sediment cores taken in northern part of the Gulf of Eilat (Gulf of Aqaba) in order to provide information on sedimentation and mixing rates and sediment sources. The maximum estimates of sedimentation rates based on excess 210Pb were found to vary between 0.105 ± 0.020 and 0.35 ± 0.23 cm · year**-1. Even the lowest estimates are significantly higher than those expected from dust deposition, suggesting other sources and processes being responsible for most of the allochthonous material accumulation, including periodical floods following heavy rain events, internal erosion or triggers, like earthquakes. In 137Cs depth profiles no 1963 related nuclear weapon test maxima were found; instead, the activities decrease monotonically, suggesting that a major process leading to radionuclides' depth distribution might be mixing. The mixing rates calculated from 137Cs, excess 210Pb and excess 228Th reach values up to 2.18 ± 0.69 cm**2 · year**-1.

Seawater carbonate chemistry and crab Necora puber size and elements in tissue during experiments, 2010

Ocean acidification (OA) is predicted to play a major role in shaping species biogeography and marine biodiversity over the next century. We tested the effect of medium-term exposure to OA (pH 8.00, 7.30 and 6.70 for 30 d) on acid-base balance in the decapod crab Necora puber-a species that is known to possess good extracellular buffering ability during short-term exposure to hypercapnic conditions. To determine if crabs undergo physiological trade-offs in order to buffer their haemolymph, we characterised a number of fundamental physiological functions, i.e. metabolic rate, tolerance to heat, carapace and chelae [Ca2+] and [Mg2+], haemolymph [Ca2+] and [Mg2+], and immune response in terms of lipid peroxidation. Necora puber was able to buffer changes to extracellular pH over 30 d exposure to hypercapnic water, with no evidence of net shell dissolution, thus demonstrating that HCO3- is actively taken up from the surrounding water. In addition, tolerance to heat, carapace mineralization, and aspects of immune response were not affected by hypercapnic conditions. In contrast, whole-animal O2uptake significantly decreased with hypercapnia, while significant increases in haemolymph [Ca2+] and [Mg2+] and chelae [Mg2+] were observed with hypercapnia. Our results confirm that most physiological functions in N. puber are resistant to low pH/hypercapnia over a longer period than previously investigated, although such resistance comes at the expenses of metabolic rates, haemolymph chemistry and chelae mineralization.

Japan´s energy future: Between a return to nuclear energy and a turn to renewables

After the triple disaster of 11 March 2011, Japan is at an energy crossroad. In the short and medium run it depends on fossil fuel imports to ensure its energy security, but the long term will be determined by the decisions taken at present. For Japan energy security is a national security challenge, as stated in its National Security Strategy. The article reviews the Japanese nuclear path, studies the factors shaping the Japanese electricity market and analyzes the current energy situation. Moreover, it also assesses the principles that have marked Japan’s energy policy and the two last Strategic Energy Plans -one prior to Fukushima and the other after it- before tackling the debate on the optimal future energy mix that Japan should adopt to meet its energy security trilemma, marked by its environmental commitment.

Modelado detallado de una central nuclear CANDU con CITVAP.

La línea de cálculo de INVAP consiste principalmente de los códigos CONDOR y CITVAP. Este último es la versión mejorada del código CITATION II que resuelve la ecuación de difusión neutrónica multigrupo por el método de diferencias finitas. CITVAP es ampliamente usado para estudiar reactores de investigación y reactores de potencia tales como PWR, BWR, VVER y últimamente se implemento nuevas funciones para estudiar una central PHWR tipo Atucha. Siguiendo con la línea de reactores PHWR, en este trabajo se estudian las capacidades y deficiencias del código de núcleo CITVAP para modelar una central nuclear tipo CANDU. Se plantean mejoras a realizar para un manejo mas eficiente desde el punto de vista del usuario, tanto de la gestión de combustibles, movimientos de barras de control y zonas líquidas como mejoras en el modelo termohidraulico. La metodología consiste en validar la línea de cálculo de INVAP, contrastando los resultados con el benchmark IAEA-tecdoc-887. El proceso de validación consiste en cálculos de celda en dos y tres dimensiones usando los códigos CONDOR y SERPENT respectivamente, obtención de secciones eficaces macroscópicas en función del quemado y cálculos de núcleo para distintas configuraciones de los dispositivos de control usando un núcleo fresco y una distribución de quemado en equilibrio. Se analizan las dificultades que se presentan al modelar el núcleo con las capacidades actuales del código y se plantean posibles soluciones a implementar. Para un estudio completo de un reactor CANDU, se estudian tres de la características distintivas de este tipo de reactor: la termohidraulica, la gestión de combustibles y los dispositivos de control de reactividad, distribución de potencia y apagado.

Role of assessment components and recent adverse outcomes in risk estimation and prediction: use of the Short Term Assessment of Risk and Treatability (START) in an adult secure inpatient mental health service

The Short Term Assessment of Risk and Treatability is a structured judgement tool used to inform risk estimation for multiple adverse outcomes. In research, risk estimates outperform the tool's strength and vulnerability scales for violence prediction. Little is known about what its’component parts contribute to the assignment of risk estimates and how those estimates fare in prediction of non-violent adverse outcomes compared with the structured components. START assessment and outcomes data from a secure mental health service (N=84) was collected. Binomial and multinomial regression analyses determined the contribution of selected elements of the START structured domain and recent adverse risk events to risk estimates and outcomes prediction for violence, self-harm/suicidality, victimisation, and self-neglect. START vulnerabilities and lifetime history of violence, predicted the violence risk estimate; self-harm and victimisation estimates were predicted only by corresponding recent adverse events. Recent adverse events uniquely predicted all corresponding outcomes, with the exception of self-neglect which was predicted by the strength scale. Only for victimisation did the risk estimate outperform prediction based on the START components and recent adverse events. In the absence of recent corresponding risk behaviour, restrictions imposed on the basis of START-informed risk estimates could be unwarranted and may be unethical.

Modelado detallado de una central nuclear CANDU con CITVAP.

La línea de cálculo de INVAP consiste principalmente de los códigos CONDOR y CITVAP. Este último es la versión mejorada del código CITATION II que resuelve la ecuación de difusión neutrónica multigrupo por el método de diferencias finitas. CITVAP es ampliamente usado para estudiar reactores de investigación y reactores de potencia tales como PWR, BWR, VVER y últimamente se implemento nuevas funciones para estudiar una central PHWR tipo Atucha. Siguiendo con la línea de reactores PHWR, en este trabajo se estudian las capacidades y deficiencias del código de núcleo CITVAP para modelar una central nuclear tipo CANDU. Se plantean mejoras a realizar para un manejo mas eficiente desde el punto de vista del usuario, tanto de la gestión de combustibles, movimientos de barras de control y zonas líquidas como mejoras en el modelo termohidraulico. La metodología consiste en validar la línea de cálculo de INVAP, contrastando los resultados con el benchmark IAEA-tecdoc-887. El proceso de validación consiste en cálculos de celda en dos y tres dimensiones usando los códigos CONDOR y SERPENT respectivamente, obtención de secciones eficaces macroscópicas en función del quemado y cálculos de núcleo para distintas configuraciones de los dispositivos de control usando un núcleo fresco y una distribución de quemado en equilibrio. Se analizan las dificultades que se presentan al modelar el núcleo con las capacidades actuales del código y se plantean posibles soluciones a implementar. Para un estudio completo de un reactor CANDU, se estudian tres de la características distintivas de este tipo de reactor: la termohidraulica, la gestión de combustibles y los dispositivos de control de reactividad, distribución de potencia y apagado.

STRUCTURAL ANALYSIS OF RIBOSOME BINDING ELEMENTS OF THE 3´ UTR IN TWO POSITIVE-STRAND PLANT RNA VIRUSES

Turnip crinkle virus (TCV) and Pea enation mosaic virus (PEMV) are two positive (+)-strand RNA viruses that are used to investigate the regulation of translation and replication due to their small size and simple genomes. Both viruses contain cap-independent translation elements (CITEs) within their 3´ untranslated regions (UTRs) that fold into tRNA-shaped structures (TSS) according to nuclear magnetic resonance and small angle x-ray scattering analysis (TCV) and computational prediction (PEMV). Specifically, the TCV TSS can directly associate with ribosomes and participates in RNA-dependent RNA polymerase (RdRp) binding. The PEMV kissing-loop TSS (kl-TSS) can simultaneously bind to ribosomes and associate with the 5´ UTR of the viral genome. Mutational analysis and chemical structure probing methods provide great insight into the function and secondary structure of the two 3´ CITEs. However, lack of 3-D structural information has limited our understanding of their functional dynamics. Here, I report the folding dynamics for the TCV TSS using optical tweezers (OT), a single molecule technique. My study of the unfolding/folding pathways for the TCV TSS has provided an unexpected unfolding pathway, confirmed the presence of Ψ3 and hairpin elements, and suggested an interconnection between the hairpins and pseudoknots. In addition, this study has demonstrated the importance of the adjacent upstream adenylate-rich sequence for the formation of H4a/Ψ3 along with the contribution of magnesium to the stability of the TCV TSS. In my second project, I report on the structural analysis of the PEMV kl-TSS using NMR and SAXS. This study has re-confirmed the base-pair pattern for the PEMV kl-TSS and the proposed interaction of the PEMV kl-TSS with its interacting partner, hairpin 5H2. The molecular envelope of the kl-TSS built from SAXS analysis suggests the kl-TSS has two functional conformations, one of which has a different shape from the previously predicted tRNA-shaped form. Along with applying biophysical methods to study the structural folding dynamics of RNAs, I have also developed a technique that improves the production of large quantities of recombinant RNAs in vivo for NMR study. In this project, I report using the wild-type and mutant E.coli strains to produce cost-effective, site-specific labeled, recombinant RNAs. This technique was validated with four representative RNAs of different sizes and complexity to produce milligram amounts of RNAs. The benefit of using site-specific labeled RNAs made from E.coli was demonstrated with several NMR techniques.