C14 Ages of sediment from the Rud Hilla delta area, Persian Gulf

Six sediment cores from the submarine delta of the Rud Hilla River in the northern part of the Persian Gulf consist of fine grained,homogeneous Holocene marls. The coarse (> 63 ~) fraction varies from 0.3 - 3.5 %. The cores are 2 - 4 m long and were taken in water depths of 8 - 56 m. In spite of the great similarity and homogeneity of the cored sediments, correspondence analysis (an extension of factor analysis) of the coarse fraction reveals the presence of four distinctive sedimentary facies: (1) a minerogenic facies, 10 km from the estuary; (2) an ophiuroidostracod facies near a lateral margin of the delta, 12 - 15 km from the estuary, (3) a benthic foraminiferal-molluskan facies, in the central part of the delta 20 km from the estuary, and near its seaward margin 120 km from the estuary, (4) a gastropod-epibiotic facies, in an area of relatively slow sedimentation on the border of the delta, 90 km from the estuary. A seventh core, taken near the seaward margin of the delta of the Rud Hilla River, penetrated homogeneous, aragonite-rich mud of late Pleistocene age. Correspondence analysis of the sand fraction of the Pleistocene sediments leads to the definition of two facies that can be readily compared with the facies identified in the Holocene cores.

Extralimital Senegalese species during Marine Isotope Stages 5.5 and 11 in the Canary Islands (29 degrees N): Sea surface temperature estimates

[EN] The presence of Harpa doris Röding, 1798 in marine deposits of the last interglacial period, ~. 130-120. ka (marine isotope stage or MIS 5.5) in the Canary Islands (Gran Canaria, Lanzarote and Fuerteventura) enabled us to compare this occurrence with its present habitat in the Gulf of Guinea and the Cape Verde Islands, well to the south. This comparison leads to the conclusion that sea surface temperatures (SSTs) in the waters around the Canary Islands during the last interglacial period were at least 3.3. °C higher than today. H. doris is found in association with the large gastropod Persististrombus latus (Gmelin, 1791) as well as the coral Siderastrea radians (Pallas, 1766).

The Influence of Geology and Season on Macroinvertebrates in Belizean Streams: Implications for Tropical Bioassessment

Considerable attention has been paid to the potentially confounding effects of geological and seasonal variation on outputs from bioassessments in temperate streams, but our understanding about these influences is limited for many tropical systems. We explored variation in macroinvertebrate assemblage composition and the environmental characteristics of 3rd- to 5th-order streams in a geologically heterogeneous tropical landscape in the wet and dry seasons. Study streams drained catchments with land cover ranging from predominantly forested to agricultural land, but data indicated that distinct water-chemistry and substratum conditions associated with predominantly calcareous and silicate geologies were key determinants of macroinvertebrate assemblage composition. Most notably, calcareous streams were characterized by a relatively abundant noninsect fauna, particularly a pachychilid gastropod snail. The association between geological variation and assemblage composition was apparent during both seasons, but significant temporal variation in compositional characteristics was detected only in calcareous streams, possibly because of limited statistical power to detect change at silicate sites, or the limited extent of our temporal data. We discuss the implications of our findings for tropical bioassessment programs. Our key findings suggest that geology can be an important determinant of macroinvertebrate assemblages in tropical streams and that geological heterogeneity may influence the scale of temporal response in characteristic macroinvertebrate assemblages.

Sources of antibiotic resistance in the environment

The discovery of antibiotics was a major breakthrough in medicine. However, short after their introduction in clinical practice resistant bacteria were detected. Nowadays, antibiotic resistance constitutes a serious public health problem. In hospital settings, with high resistance levels, reducing drastically the therapeutic options. Carbapenems are last-resort antibiotics used in Portugal, only in hospitals, to treat serious infections. Bacterial resistance towards this class of antibiotics has increased during last years. In Gram-negative bacteria the production of carbapenemases is a common resistance mechanism. OXA-48 is a carbapenemase of Ambler class D and represents a major concern for human health. It is frequently detected in clinical isolates of Enterobacteriaceae. There are few studies suggesting that genes encoding for OXA-48 variants originated from genes present in the chromosome of members of genus Shewanella, and have disseminated to Enterobacteriaceae members, associated with mobile genetic elements. The aim of this study was to characterize strains from different sources of Shewanella to confirm its role as OXA-48 progenitor. For this, the phylogenetic affiliation of 33 strains of Shewanella was performed by 16SrDNA and gyrB sequencing. The most common species were S. hafniensis and S. xiamenensis, but also S. aestuarii, S. baltica, S. indica, S. haliotis, S. putrefaciens, S. algidipiscicola, S. irciniae, S. algae and S. fodinae were identified. blaOXA-48-like genes were detected in 21 isolates: S. hafniensis (8/8), S. xiamenensis (5/5), S. baltica (4/4), S. algae (1/1), S. fodinae (1/1), S. putrefaciens (1/2) and S. algidipiscicola (1/2). Sequence analysis revealed that genes encoded enzymes identical to OXA-48, OXA-181 and OXA-204 but also new variants differing from OXA-48 from 2 to 81 aminoacids. Genetic context analysis revealed the C15 gene upstream and lysR gene downstream, identical to what has been identified so far flanking blaOXA-48-like genes in Shewanella spp. The assessment of antibiotic susceptibility was performed for all isolates using the disk diffusion method. In general, it was observed a great sensitivity for all antibiotics except to amoxicillin and aztreonam. Multidrug resistance was detected in only 1 isolate. Other resistance genes and the presence of integrons were not identified. Plasmids were detected in 30.3% isolates (10/ 33). These results reinforce the role of Shewanella spp. as origin of blaOXA-48-like genes.

Survey of food network in Ovan Lake

Lake Ovan with about 9 hectares is regarded a semi-shallow lake with an average depth 5.2 meter. It is situated in Ghazvin Province, with a 1910 m high in mountainous regime. A monthly sampling was done at 3 stations studying the physicochemical and biological parameters in water and sediment at the Lake for a year. The temperature annual was measured 12.3°C and other parameters are pH as 8.8, oxygen 10, with total mean phosphate and nitrate as 0.14 & 0.8 mg/lit respectively. The chl.a mean was also measured 1.94 mg/lit. The ratio of N to P was calculated as 1:59, indicating a limiting factor for growth. Considering the trophic statues of the lake taking into account as above parameters, it is a mesotrophic lake with medium trophy. Altogether, 53 phytoplankton species were identified mostly diatoms, green algae and cyanobacteria. Although, 14 zooplankton species were identified with daphnia dominating the group. Macrobenthoses were also surveyed and 11 families were identified comprising mainly by Annelids, Gastropod, Bivalves and Insect Larvae. Other organisms were 2 dominate water plant including Phragmites australis covering at the edge of the lake and potamogeton sp in the inner parts, and also 2 fish species, common carp and Pike Perch. The diversity Shannon—Wiener index was calculated for main taxa groups with all figures lower than 3. Regarding the fish potential production of the lake based on Bramic & Lemke and morphoedophic index, it was calculated to be 20.4 kg/ha fish and a total of about 150 kg for the entire lake.

Zróżnicowanie struktury leśnych zgrupowań ślimaków jako efekt uwarunkowań naturalnych i antropogenicznych na przykładzie grądów w Wielkopolsce

Wydział Biologii

Contribuição da catodoluminescência para o entendimento da diagênese da formação Jandaíra: áreas do campo de petróleo da fazenda Belém e Lajedo do Rosário

The general objective of this study was to contribute to the understanding of the chemical evolution of fluids that percolate through carbonate rocks of the Jandaíra Formation. The oxidation and reduction conditions in which grains, source and cement were formed was investigated using the cathodoluminescence technique (CL). The study area is located in the west part of the Potiguar Basin (Fazenda Belém field) and Rosário Ledge (Felipe Guerra municipality, State of Rio Grande do Norte, Brazil). The analysis of thin sections of carbonate rocks under CL revealed that grains (allochemical or not) and diagenetic products (micritization, dolomitization, neomorphism and cementation) exhibit since absence of luminescence the various luminescence colors (yellow, orange, red, brown, and blue) in a variety of intensities. As pure calcite shows dark blue luminescence, the occurrence of different luminescence colors in calcite crystals suggest one or more punctual crystal defects such as free electron, free space and impurity. The dyeing of thin sections with alizarin and potassium ferrocyanide revealed the absence of ferrous carbonate in the different lithotypes of Jandaíra Formation. Therefore, the different colors and intensities of CL observed in these rocks are probably caused by the presence of ion activators such as Mn2+ and is not an activator/inhibitor combination. In the same way, the absence of luminescence is very probably caused by the absence of activator ions and not due to the low concentration of inhibitor ions such as Fe2+. The incorporation of Mn2+ in the different members of the Jandaíra Formation must have been controlled by the redox state of the depositional environment and diagenesis. Therefore, it is possible that the luminescent members have been formed (e.g.,ooids) or have been modified (gastropod neomorphism) under reduction conditions in the depositional environments, in subsurface during the burial, or, in the case of Rosario Ledge samples , during the post-burial return to surface conditions. As regards the sudden changes from low to moderate and to strong luminescence, these features should indicate the precipitation of a fluid with chemical fluctuations, which formed the frequent zonations in the block cement of the Rosario Ledge samples. This study suggests that the different intensities and colors of CL should be correlated with the Mn2+ and Fe2+ contents, and stable isotopes of samples to determine the salinity, temperature, pH e Eh conditions during deposition

Biological features of a puzzling symbiotic association between the hermit crab Dardanus insignis and the porcellanid crab Porcellana Sayana (Crustacea)

The symbiotic lifestyle is widespread among porcellanid crabs, which maintain ecological and co-evolutionary associations with annelid polychaetes, poriferans, cnidarians, echinoderms, gastropod. mollusks, and other crustaceans such as shrimps and hermit crabs, among others. We investigated the ecological association between the hermit crab Dardanus insignis and the porcellanid Porcellana sayana, in southeastern Brazil. Porcellanid crabs, hermit crabs, and available shells were collected monthly from July 2001 to June 2003, with a shrimp boat equipped with two double-rig trawl nets. The majority of P. sayana specimens were collected in shells occupied by D. insignis (96.6%); a few were found in empty shells (3.4%). The catch of both symbionts and hosts increased with increasing depth, with the highest occurrence at 35 m. The F. sayana crabs of various sizes could be found solitary or forming aggregations of up to 14 individuals per host, showing no sex or size segregation. In spite of the high diversity of shell species occupied by the hermit crabs and also available in the field, only a few of them were also utilized by P. sayana. The majority (93%) of shells utilized by P. sayana also hosted other symbiont species, constituting the basis of extensive symbiotic complexes. Thus, the ecological relationship between D. insignis and P. sayana may be classified as a non-obligate and non-specific symbiosis that may also involve other facultative organisms such as sea anemones. (C) 2008 Elsevier B.V. All rights reserved.

Individual differences in activity and habitat selection of juvenile queen conch evaluated using acceleration biologgers

Fine-scale differences in behaviour and habitat use have important ecological implications, but have rarely been examined in marine gastropods. We used tri-axial accelerometer loggers to estimate activity levels and movement patterns of the juvenile queen conch Lobatus gigas (n = 11) in 2 habitat types in Eleuthera, The Bahamas. In 2 manipulations in nearshore areas, queen conchs were equipped with accelerometers and released in adjacent coral rubble or seagrass habitats. Queen conchs were located approximately every 6 h during daylight by snorkeling, to measure individual differences in linear distance moved, and after 24 h they were relocated to an alternate habitat (24 h in each habitat). We found significant inter-individual variability in activity levels, but more consistent levels of activity between the 2 habitat types within individual queen conchs. Four (36%) of the individuals placed in seagrass moved back to the adjacent coral rubble habitat, suggesting selectivity for coral rubble. Individuals showed variable behavioural responses when relocated to the less preferable seagrass habitat, which may be related to differing stress-coping styles. Our results suggest that behavioural variability between individuals may be an important factor driving movement and habitat use in queen conch and, potentially, their susceptibility to human stressors. This study provides evidence of diverse behavioural (activity) patterns and habitat selectivity in a marine gastropod and highlights the utility of accelero meter biologgers for continuously monitoring animal behaviour in the wild.

Prey selection, size, and breakage differences in Turbo undulatus opercula found within Pacific Gull (Larus pacificus) middens compared to Aboriginal middens and natural beach deposits, southeast Australia

Qualitative discrimination criteria are employed commonly to distinguish cultural shell middens from natural shell deposits. Quantitative discrimination criteria remain less developed beyond an assumption that natural shell beds tend to contain a wider range of shell sizes compared to cultural shell middens. This study further tests this assumption and provides the first comparative quantitative analysis of shell sizes from cultural middens, bird middens, and beach shell beds. Size distributions of opercula of the marine gastropod Turbo undulatus within two modern Pacific Gull (Larus pacificus) middens are compared with two Aboriginal middens (early and late Holocene) and two modern beach deposits from southeast Australia. Results reveal statistically significant differences between bird middens and other types of shell deposits, and that opercula size distributions are useful to distinguish Aboriginal middens from bird middens but not from beach deposits. Supplementary qualitative analysis of taphonomic alteration of opercula reveal similar opercula breakage patterns in human and bird middens, and further support previously recognised criteria to distinguished beach deposits (water rolling and bioerosion) and human middens (burning). Although Pacific Gulls are geographically restricted to southern Australia, the known capacity of gulls (Larus spp.) in other coastal contexts around the world to accumulate shell deposits indicates the broader methodological relevance of our study.

Life history of a native emydid turtle (Malaclemys terrapin centrata) on the remote oceanic islands of Bermuda

Diamondback terrapins (Malaclemys terrapin) are native to the remote oceanic islands of Bermuda and presently inhabit only four small brackish water ponds on a private golf course. The life history of this species is poorly understood on Bermuda and so the aim of this study was to fill these knowledge gaps, to compare the results with what is known from other areas in the North American range, and to inform the development of a local management plan. The results of a mark-recapture census revealed that ca. 100 individuals ≥81 mm straight carapace length live on Bermuda, of which nearly half (48.5%) were considered sexually mature. The population is dominated by females (sex ratio 2.9:1) and annual recruitment over the three year period was found to be extremely low (approximately two terrapins). Female diamondback terrapins in Bermuda nest almost exclusively within a limited number of sand bunkers on the golf course. Nesting commenced in late March or early April and ended in late August. Peak oviposition was observed in May and June. Clutch size averaged 5.1 eggs (range 0-10; SD 2.4) and the incubation period averaged 61.8 days (range 49-83; SD 10.5). Delayed emergence was documented, with 43.8% of the hatchlings remaining in their natal nests over the winter months. The mean annual hatching success rate was determined to be 19% (range 17.6-21; SD 1.9). Radio-telemetry was used to investigate the movements and survivorship of postemergent hatchling diamondback terrapins. The results indicated that mangrove swamps and grass-dominated marshes adjacent to the ponds are important developmental habitats for hatchlings. Yellow-crowned night herons (Nyctanassa violacea) were found to be significant predators of small terrapins during spring emergence. Small aquatic gastropods comprised 66.7% of the faecal samples analysed from the Bermudian population. Scavenged fish and vertebrate animal remains, terrestrial arthropods, polychaete worms and bivalves were consumed in lesser amounts. Sediment from the pond environment was found in 74% of the faecal samples analysed and is believed to have been incidentally ingested while foraging for the small benthic gastropods. Eco-toxicological analyses of the pond sediment, prey and terrapin eggs showed that the Bermudian diamondback terrapins live and feed in wetland habitats characterised by chronic, multifactorial contamination; principally total petroleum hydrocarbons, polycyclic aromatic hydrocarbons and a variety of heavy metals. This study found that some of those contaminants are accumulating in the gastropod prey as well as being transferred to terrapin eggs. This may be reducing the incidence of successful embryonic development for this species in Bermuda and may likely contribute to the observed low hatching rates. These collective findings indicate that the Bermudian population is very vulnerable to local extirpation.

The environmental impact of sewage and wastewater outfalls in Antarctica: an example from Davis station, East Antarctica

We present a comprehensive scientific assessment of the environmental impacts of an Antarctic wastewater ocean outfall, at Davis station in East Antarctica. We assessed the effectiveness of current wastewater treatment and disposal requirements under the Protocol on Environmental Protection to the Antarctic Treaty. Macerated wastewater has been discharged from an outfall at Davis since the failure of the secondary treatment plant in 2005. Water, sediment and wildlife were tested for presence of human enteric bacteria and antibiotic resistance mechanisms. Epibiotic and sediment macrofaunal communities were tested for differences between sites near the outfall and controls. Local fish were examined for evidence of histopathological abnormalities. Sediments, fish and gastropods were tested for uptake of sewage as measured by stable isotopes of N and C. Escherichia coli carrying antibiotic resistance determinants were found in water, sediments and wildlife (the filter feeding bivalve Laternula eliptica). Fish (Trematomus bernacchii) within close proximity to the outfall had significantly more severe and greater occurrences of histopathological abnormalities than at controls, consistent with exposure to sewage. There was significant enrichment of (15)N in T. bernacchii and the predatory gastropod Neobuccinum eatoni around the outfall, providing evidence of uptake of sewage. There were significant differences between epibiotic and sediment macrofaunal communities at control and outfall sites (<1.5 km), when sites were separated into groups of similar habitat types. Benthic community composition was also strongly related to habitat and environmental drivers such as sea ice. The combined evidence indicated that the discharge of wastewater from the Davis outfall is causing environmental impacts. These findings suggest that conditions in Antarctic coastal locations, such as Davis, are unlikely to be conducive to initial dilution and rapid dispersal of wastewater as required under the Protocol on Environmental Protection to the Antarctic Treaty. Current minimum requirements for wastewater treatment and disposal in Antarctica are insufficient to ameliorate these risks and are likely to lead to accumulation of contaminants and introduction of non-native microbes and associated genetic elements. This new understanding suggests that modernised approaches to the treatment and disposal of wastewater are required in Antarctica. The most effective solution is advanced levels of wastewater treatment, which are now possible, feasible and a high priority for installation. As a direct outcome of the study, a new advanced treatment system is being installed at Davis, effectively avoiding environmental risks.

Molluscan diversity caught by trawling fisheries: a case study in southern Portugal

The effects of commercial trawling on the malacological communities (except for the Cephalopoda) were examined, based on a study undertaken between 1996 and 2000 on the continental shelf and slope of southern Portugal. More than 50% of species caught by trawling in southern Portugal were discarded, with molluscs representing about 19%. Forty-four species of molluscs (15 bivalves, 28 gastropods and one polyplacophoran) were identified from the discarded specimens. Crustacean trawlers accounted for 34 molluscs species, and fish trawlers for 24. Twenty species were only caught by the crustacean trawl, compared with 10 species by the fish trawl, and 14 species were common to both trawls. The bivalve Venus nux Gmelin was the most numerous species discarded in the fish trawl, accounting for 42.0% of the total number of individuals, followed by the gastropods Ampulla priamus (Meuschen) (7.8%) and Ranella olearium (L.) (7.3%). In the crustacean trawl, the most numerous species discarded were the bivalve Anadara diluvii (Lamarck) (19.4%), the gastropod Calliostoma granulatum (Born) (15.5%), and the bivalve V. nux (15.1%). The third most discarded species from fish trawls in Algarve waters, the gastropod species R. olearium, is a species listed in Annex II of the Bern Convention. The difficulties of managing the real impact of fisheries on the molluscan populations and in defining a conservation strategy are discussed.

Use of different intertidal habitats by faunal communities in a temperate coastal lagoon

The faunal communities of four intertidal habitats namely sand, mud, seagrass (Zostera noltii) and seagrass patches (mixSM) of a temperate coastal lagoon, Ria Formosa (southern Portugal), were sampled. A total of 47 species were taken in 428 bottomless drop sampler samples, with the highest number of species and the more commonly occurring species belonging to the Mollusca phylum. The dominance of these gastropod species underlines the importance of the grazing food chain in these habitats. Bittium reticulatum was the most abundant species, being especially abundant in the seagrass habitat. The most frequent and highest biomass species in the community was Carcinus maenas, a predator that makes use of the available resources and that is adapted to the highly variable intertidal environment. Pomatoschistus microps was the most abundant fish species, with highest densities in the mud habitat, which demonstrates an ability to occupy a low depth area. The seagrass; habitat had the highest diversity, abundance and biomass, followed by the mixSM habitat and was different from all the others. Assemblages were highly influenced by the presence of vegetation, providing forage and refuge from predation. A well defined summer group was identified in all habitats. These results highlight the importance of seagrass beds and the idea that their decrease implies the decrease of lagoon production through the impoverishment of the trophic structure of the lagoon. (C) 2008 Elsevier Ltd. All rights reserved.

First record of Calcinus tubularis on the southern coast of Portugal (Crustacea: Decapoda: Anomura: Diogenidae)

Twenty-five specimens of the hermit crab Calcinus tubularis were observed during SCUBA dives for fauna and flora assessment in the shallow rocky reefs of the southern coast of Portugal between 2003 and 2008. Of the specimens observed, only one specimen used a tube gallery, while the others occupied unidentified gastropod shells with strong bio-cover. Calcinus tubularis is here recorded from the mainland Portuguese coast for the first time. This is the first record of the species in European coastal waters outside the Mediterranean Sea (excluding the Atlantic Islands) and extends the known geographical distribution of the species further north in the north-eastern Atlantic.