Invertebrates from the Low Head Member (Polonez Cove Formation, Oligocene) at Vaureal Peak, King George Island, West Antarctica

Eight taxa of marine invertebrates, including two new bivalve species, are described from the Low Head Member of the Polonez Cove Formation (latest early Oligocene) cropping out in the Vaureal Peak area, King George Island, West Antarctica. The fossil assemblage includes representatives of Brachiopoda (genera Neothyris sp. and Liothyrella sp.), Bivalvia (Adamussium auristriatum sp. nov., ?Adamussium cf. A. alanbeui Jonkers, and Limatula (Antarctolima) ferraziana sp. nov.), Bryozoa, Polychaeta (serpulid tubes) and Echinodermata. Specimens occur in debris flows deposits of the Low Head Member, as part of a fan delta setting in a high energy, shallow marine environment. Liothyrella sp., Adamussium auristriatum sp. nov. and Limatula ferraziana sp. nov. are among the oldest records for these genera in King George Island. In spite of their restrict number and diversification, bivalves and brachiopods from this study display an overall dispersal pattern that roughly fits in the clockwise circulation of marine currents around Antarctica accomplished in two steps. The first followed the opening of the Tasmanian Gateway at the Eocene/Oligocene boundary, along the eastern margin of Antarctica, and the second took place in post-Palaeogene time, following the Drake Passage opening between Antarctic Peninsula and South America, along the western margin of Antarctica.

Mineral XRD peak areas and ratios of ODP Site 184-1146 clays, South China Sea

Site 1146 (19°27.40'N, 116°16.37'E) was drilled in ~2092 m water depth in a rift basin on the continental slope of the South China Sea. A total of 607 m of sediment was cored in Hole 1146A, and a composite section from three holes extends down to 640 meters composite depth (mcd). Three stratigraphic sedimentary units were recognized at this site: late Pliocene to Pleistocene nannofossil clay (Unit I), middle Miocene to late Pliocene foraminifer and nannofossil clay mixed sediment (Unit II), and early to middle Miocene nannofossil clay (Unit III). This study reports the mineralogy from the late Miocene through early Pleistocene, 150-440 mcd.

Peak areas and heights for minerals of ODP Leg 113-696B (Table 1)

Seismic data acquired over the eastern shelf and margin of the South Orkney microcontinent, Antarctica, have shown a high-amplitude reflection lying at a sub-bottom two-way traveltime (TWT) of 0.5-0.8 s. There appear to be two causes for the reflection which apply in different parts of the shelf. The more widespread cause of the reflection is a break-up unconformity associated with the opening of Jane Basin to the east. This is clearly seen where reflections in the underlying sequence are discordant. In contrast, in Eotvos Basin and the southeastern part of Bouguer Basin, the high-amplitude reflection in places cuts across bedding and is interpreted to be caused by silica diagenesis. A post-cruise analysis of core samples from Site 696 in Eotvos Basin by X-ray diffraction (XRD) and scanning electron microscopy (SEM) revealed the presence of a silica diagenetic front at 520-530 mbsf. The position of the unconformity at this site is uncertain, but probably coincides with a change of detrital input near 548 mbsf. Fluctuations of physical properties related to the depth of the diagenetic front are difficult to separate from those related to the variation of detrital composition over the same depth interval. Correlation of the drilling record with the seismic record is difficult but with a synthetic seismogram it is demonstrated that diagenesis is the probable cause of the high-amplitude reflection. In Bouguer Basin at Site 695 the depth of the high-amplitude reflection was not reached by drilling; however, the reflection is probably also caused by silica diagenesis because of the biogenic silica-rich composition of the sediments cored. The estimated temperatures and ages of the sediments at the depths of the high-amplitude reflections at Sites 695 and 696 compare favorably with similar data from other diagenetic fronts of the world. The high-amplitude reflection in Bouguer Basin is commonly of inverse polarity, possibly caused either by interference between reflections from several closely-spaced reflecting layers, such as chert horizons, or by free gas trapped near the diagenetic front.

Design, implementation and multisite evaluation of a system suitability protocol for the quantitative assessment of instrument performance in liquid chromatography-multiple reaction monitoring-MS (LC-MRM-MS)

Multiple reaction monitoring (MRM) mass spectrometry coupled with stable isotope dilution (SID) and liquid chromatography (LC) is increasingly used in biological and clinical studies for precise and reproducible quantification of peptides and proteins in complex sample matrices. Robust LC-SID-MRM-MS-based assays that can be replicated across laboratories and ultimately in clinical laboratory settings require standardized protocols to demonstrate that the analysis platforms are performing adequately. We developed a system suitability protocol (SSP), which employs a predigested mixture of six proteins, to facilitate performance evaluation of LC-SID-MRM-MS instrument platforms, configured with nanoflow-LC systems interfaced to triple quadrupole mass spectrometers. The SSP was designed for use with low multiplex analyses as well as high multiplex approaches when software-driven scheduling of data acquisition is required. Performance was assessed by monitoring of a range of chromatographic and mass spectrometric metrics including peak width, chromatographic resolution, peak capacity, and the variability in peak area and analyte retention time (RT) stability. The SSP, which was evaluated in 11 laboratories on a total of 15 different instruments, enabled early diagnoses of LC and MS anomalies that indicated suboptimal LC-MRM-MS performance. The observed range in variation of each of the metrics scrutinized serves to define the criteria for optimized LC-SID-MRM-MS platforms for routine use, with pass/fail criteria for system suitability performance measures defined as peak area coefficient of variation <0.15, peak width coefficient of variation <0.15, standard deviation of RT <0.15 min (9 s), and the RT drift <0.5min (30 s). The deleterious effect of a marginally performing LC-SID-MRM-MS system on the limit of quantification (LOQ) in targeted quantitative assays illustrates the use and need for a SSP to establish robust and reliable system performance. Use of a SSP helps to ensure that analyte quantification measurements can be replicated with good precision within and across multiple laboratories and should facilitate more widespread use of MRM-MS technology by the basic biomedical and clinical laboratory research communities.