Identification of a putative cellulase gene in the giant freshwater prawn, Macrobrachium rosenbergii (De Man, 1879)

Nutrition plays an important role in the development of all organisms and in particular that of farmed aquatic species where costs associated with feed can often exceed 60% of total production costs. Crustacean species in addition, have the added metabolic requirement for regular moulting to allow normal growth and this requires large amounts of energy in the form of sugars (glucose). The current study explored the capacity of the giant freshwater prawn to produce endogenous cellulose-degrading enzymes capable of extracting nutrients (simple sugars) from plant sources in formulated feeds used in the prawn aquaculture industry. We identified a putative cellulase cDNA fragment in the target organism of 1576 base pairs in length of non-microbial origin that after protein modelling exhibited a TM-score of 0.916 with a described cellulase reported from another crustacean species. The functional role of cellulase enzymes is to hydrolyse cellulose to glucose and the fragment identified in GFP was highly expressed in the hepatopancreas, the site of primary food digestion and absorption in crustaceans. Hepatopancreatic tissue from Macrobrachium rosenbergii also showed active digestion of cellulose to glucose following an endoglucanase assay. Cellulase gene(s) are present in the genomes of many invertebrate taxa and play an active role in the conversion of cellulose to available energy. Identification and characterization of endogenous cellulase gene(s) in giant freshwater prawn can assist development of the culture industry because the findings confirm that potentially greater levels of low-cost plant-material could be included in artificial formulated diets in the future without necessarily compromising individual growth performance. Ultimately, this development may contribute to more efficient, cost-effective production systems for freshwater prawn culture stocks that meet the animal's basic nutritional requirements and that also support good individual growth rates.

A candidate gene association study for growth performance in an improved Giant Freshwater Prawn (Macrobrachium rosenbergii) culture line

A candidate gene approach using type I single nucleotide polymorphism (SNP) markers can provide an effective method for detecting genes and gene regions that underlie phenotypic variation in adaptively significant traits. In the absence of available genomic data resources, transcriptomes were recently generated in Macrobrachium rosenbergii to identify candidate genes and markers potentially associated with growth. The characterisation of 47 candidate loci by ABI re-sequencing of four cultured and eight wild samples revealed 342 putative SNPs. Among these, 28 SNPs were selected in 23 growth-related candidate genes to genotype in 200 animals selected for improved growth performance in an experimental GFP culture line in Vietnam. The associations between SNP markers and individual growth performance were then examined. For additive and dominant effects, a total of three exonic SNPs in glycogen phosphorylase (additive), heat shock protein 90 (additive and dominant) and peroxidasin (additive), and a total of six intronic SNPs in ankyrin repeats-like protein (additive and dominant), rolling pebbles (dominant), transforming growth factor-β induced precursor (dominant), and UTP-glucose-1-phosphate uridylyltransferase 2 (dominant) genes showed significant associations with the estimated breeding values in the experimental animals (P =0.001−0.031). Individually, they explained 2.6−4.8 % of the genetic variance (R2=0.026−0.048). This is the first large set of SNP markers reported for M. rosenbergii and will be useful for confirmation of associations in other samples or culture lines as well as having applications in marker-assisted selection in future breeding programs.

Modeling meat yield based on measurements of body traits in genetically improved giant freshwater prawn (GFP) Macrobrachium rosenbergii

A single-generation dataset consisting of 1,730 records from a selection program for high growth rate in giant freshwater prawn (GFP, Macrobrachium rosenbergii) was used to derive prediction equations for meat weight and meat yield. Models were based on body traits [body weight, total length and abdominal width (AW)] and carcass measurements (tail weight and exoskeleton-off weight). Lengths and width were adjusted for the systematic effects of selection line, male morphotypes and female reproductive status, and for the covariables of age at slaughter within sex and body weight. Body and meat weights adjusted for the same effects (except body weight) were used to calculate meat yield (expressed as percentage of tail weight/body weight and exoskeleton-off weight/body weight). The edible meat weight and yield in this GFP population ranged from 12 to 15 g and 37 to 45 %, respectively. The simple (Pearson) correlation coefficients between body traits (body weight, total length and AW) and meat weight were moderate to very high and positive (0.75–0.94), but the correlations between body traits and meat yield were negative (−0.47 to −0.74). There were strong linear positive relationships between measurements of body traits and meat weight, whereas relationships of body traits with meat yield were moderate and negative. Step-wise multiple regression analysis showed that the best model to predict meat weight included all body traits, with a coefficient of determination (R 2) of 0.99 and a correlation between observed and predicted values of meat weight of 0.99. The corresponding figures for meat yield were 0.91 and 0.95, respectively. Body weight or length was the best predictor of meat weight, explaining 91–94 % of observed variance when it was fitted alone in the model. By contrast, tail width explained a lower proportion (69–82 %) of total variance in the single trait models. It is concluded that in practical breeding programs, improvement of meat weight can be easily made through indirect selection for body trait combinations. The improvement of meat yield, albeit being more difficult, is possible by genetic means, with 91 % of the variation in the trait explained by the body and carcass traits examined in this study.

Freshwater prawn fry production and delivery process: key to sustainable aquaculture development for Bangladesh

This study was conducted to identify a functioning fingerlings production and delivery system for a sustainable aquaculture development. Data were collected from 234 respondents randomly sampled from a population of 600 fish farmers. Results indicated that farmer-to-farmer was the major source of fingerlings production and distribution system. Although this source accessed disadvantaged groups like the rural based, resource poor, less educated and women, it lacked knowledge on how to produce good quality fingerlings. These results suggest that a decentralized and privatized fingerlings production and delivery system should be promoted. For this system to operate effectively the aquaculture department should first identify potential zones for aquaculture growth and profit motivated fingerlings producers and distributors. Furthermore, the institutional mechanism through which farmer-to-farmer will operate should be identified and strengthened through short and long term training programmes. The government should support the system by providing guidelines for good quality fingerlings management; maintain brood stock parents and technical training in Bangladesh.

Integration of freshwater prawn culture with rice farming in Kuttanad, India

The integration of paddy cultivation with prawn/fish culture can become a viable alternative to effectively utilize the vast area of derelict polders (embanked coastal flood plains) in Kuttanad, India. Nearly 55 000 ha of wetlands in Kuttanad are available for paddy cultivation year-round. Around 5 000 ha of the polders are utilized for Macrobrachium rosenbergii culture as a follow-up crop. Of the total area, about 250 ha of fallow polders are utilized for monoculture of M. rosenbergii from March to October, while in 4 750 ha polyculture with Indian and exotic carps is practiced from November to June. Stocking density is 15 000 to 60 000/ha for monoculture of M. rosenbergii, while in polyculture with carps, it is 5 000 to 20 000/ha of prawn and 5 000 to 10 000/ha of fish. Production from monoculture varies from 95 to 1 297 kg/ha whereas production from polyculture systems it is 70 to 500 kg/ha of prawn and 200 - 1 200 kg/ha of fish. Profits range from Rs. 5 000 to 20 000/ha. An evaluation is made of how the present polders of Kuttanad are best utilized for culture of M. rosenbergii following different systems of integrated farming and how the integration is useful in the aquaculture sustainability of Kuttanad, a tropical wetland ecosystem.

Genetic diversity in wild stocks of the giant freshwater prawn (Macrobrachium rosenbergii): implications for aquaculture and conservation

The giant freshwater prawn (Macrobrachium rosenbergii) is cultured widely around the world but little is known about the levels and patterns of genetic diversity in either wild or cultured stocks. Studies have suggested that genetic diversity may be relatively low in some cultured stocks due to the history of how they were founded and subsequent exposure to repeated population bottlenecks in hatcheries. In contrast, wild stocks have an extensive distribution that extends from Southern Asia across Southeast (SE) Asia to the Pacific region. Therefore, wild stocks could be an important resource for genetic improvement of culture stocks in the future. Understanding the extent and patterns of genetic diversity in wild giant freshwater prawn stocks will assist decisions about the direction future breeding programs may take. Wild stock genetic diversity was examined using a 472 base-pair segment of the 16S rRNA gene in 18 wild populations collected from across the natural range of the species. Two major clades ("eastern" and "western") were identifi ed either side of Huxley’s line, with a minimum divergence of 6.2 per cent, which implies separation since the Miocene period (5-10 MYA). While divergence estimates within major clades was small (maximum 0.9 per cent), evidence was also found for population structuring at a lower spatial scale. This will be examined more intensively with a faster evolving mtDNA gene in the future.

Development of giant freshwater prawn broodstock

The commercial success of a giant freshwater prawn (Macrobrachium rosenbergii) hatchery depends upon the uninterrupted supply of the desired quantity and quality of broodstock. This study was an attempt to develop the broodstock near a hatchery, to be used for seed production throughout the year. The hatchery produced seed were stocked at the rate of 3/m2 after initial pond preparation. The prawns were fed with a pelleted diet (3 mm size) prepared by using locally available feed ingredients. The seed had an initial weight of 0.30 g and attained an average weight of 92.0 g and 62.0 g in males and females, respectively, within 11 months. Berried prawns were observed starting from the month of June (5%), after six months of stocking, with a maximum in September (60%). The percentage of berried prawns increased from June to September when the water temperature was optimum and decreased from December when it got cold. The broodstock developed in this experiment could be used in the hatchery after six months of stocking, and brooders could be used to produce seed for two seasons before being sold in the market.

Rice-freshwater prawn (Macrobrachium rosenbergii) farms in the Mekong Delta, Vietnam

Aquaculture in riceland has been practiced in Mekong Delta, Vietnam for a long time and integrated rice-freshwater prawn (Macrobrachium rosenbergii) farming has become more and more popular. The integrated farming systems developed and practiced by farmers in the area to produce more food and more cash crops are presented and discussed.

Freshwater prawn farming trials in Bangladesh

Details are given of pond trials conducted in Bangladesh regarding the culture of freshwater prawn (Macrobrachium rosenbergii ). Integrated rice and prawn farming systems were also experimented and results indicated that the prawn could be a suitable species for such integration. Such systems, pond or integrated, are suggested to be best practiced in the southeastern and southwestern areas of the country where there is tidal water exchange and post-larvae are naturally available.

Genetic improvement of freshwater prawn, Macrobrachium rosenbergii (de Man) in India. Phase two: annual report for period January to December 2012

Macrobrachiurn rosenbergii is one of the widely cultured freshwater prawn species globally. India was the third largest producer of this species in 2007 and its aquaculture production rose to 43,000 metric tons (t) in 2005 froin less than 500 t in 1995. However, since then production has been declining and in 2008-09 it was 12,856 t, a reduction of more than 70% compared to 2005. There are several contributing factors to this decline, such as slow growth rate, poor survival, disease outbreaks, increase in cost of production, and availability of low risk alternative fish species. However, there is a consensus that poor seed quality leading to unsatisfactory growth and survival rates in ponds is one of the major reasons. Hence, the development of a systematic selective breeding program aimed at improving growth rate and ensuring high survival rate of this species was deemed a high priority. The Central Institute of Freshwater Aquaculture (CIFA), Bhubaneswar, India in collaboration with the WorldFish Center, Malaysia initiated a selective breeding program for this species in 2007.

Karyotypic studies of freshwater prawn Machrobrachium rosenbergii

Chromosomal studies were conducted on Macrobrachium rosenbergii. On the basis of 50 metaphase plate counts, 38 metacentric, 14 sub metacentric and 66 telocentric chromosomes (2n = 118) were observed. The total length of the granomme was recorded to be 34.2 micron.

Investigation on bacterial flora of farmed freshwater prawn (Macrobrachium rosenbergii de Man) in Bangladesh

Total bacterial load in the haemolymph of freshwater prawn Macrobrachium rosenbergii varied from 6.2x10⁴ to 1.9x10⁷ CFU/ml whereas in the hepatopancreas, bacterial load varied from 1.9x10³ to 2.9x10⁵ CFU/g. The total bacterial load in the pond water varied from 2.6x10² to 4.1x10⁵ CFU/ml. The isolated bacterial genera in the haemolymph and the hepatopancreas of prawn were Streptococcus, Acinetobacter, Micrococcus, Aeromonas, Vibrio, Flavobacterium, Staphylococcus and Pseudomonas, whereas the detected bacterial genera in pond water were Micrococcus, Streptococcus, Vibrio, Flavobacterium, Staphylococcus, Pseudomonas and Aeromonas. Among the detected genera, Vibrio and Staphylococcus were found to be dominant genera in the haemolymph of the sampled prawn throughout the study period whereas Staphylococcus and Pseudomonas were dominant in pond water.

Development of low-cost feed for culture of giant freshwater prawn (Macrobrachium rosenbergii de Man) in ponds

An experiment was conducted for 105 days in 12 earthen mini ponds of each 30m² size. Five different experimental diets containing 32% protein were formulated and prepared using fishmeal, shrimp meal, soybean meal, mustard oil cake, sesame meal, wheat bran and rice bran. A commercial shrimp diet (SABINCO starter-III) was assigned to treatment six and considered as the control. Prawns were stocked at the rate of 2.5 fry/m² and feed twice daily at the rate of 10% at the beginning and reduced to 8% for the last two months. The results of the experiment showed that prawn fed diets 1, 2, and 6 (control) showed significantly (P<0.05) highest weight gain among the dietary groups, while prawn fed diet 5 showed significantly lowest weight gain. The FCR values of diets ranged between 3.06 to 4.85. Prawns fed diet 1 and 6 showed significantly higher SGR, survival (%) and production among the dietary groups. The survival (%) of the prawns ranged between 46.6 to 66.6% and the production ranged between 304.5 to 563.3 kg/ha/105 days. The result of the study showed that diet containing 30% fishmeal, 5% shrimp meal, 5% soybean meal, 10% mustard oil cake, 10% sesame meal, 20% wheat bran, 18% rice bran, 1% oyster shell and 1% vitamin premix may be recommended for monoculture of M. rosenbergii.

Comparison of growth and conversion efficiency of the freshwater prawn Macrobrachium malcolmsonii (H. Milne Edwards) juveniles fed with formulated and commercial feeds

A nutritional study was carried out to know the feasibility of formulated and commercial feeds on the growth of juveniles of the freshwater prawn Macrobrachium malcolmsonii. Best relative growth rate was observed for feed 1 followed by feeds 2 and 3. Animals fed with feed 1 showed higher production than the other feeds. Higher assimilation efficiency was noticed in the animals provided with feeds 5 and 4. Higher gross and net growth efficiencies were observed in the animals offered feed 1. Among the commercial feeds, feed 3 may considered to be suitable alternative to feed 1.