Pollen Sources

This chapter reviews what is known about abundance and distribution of the 12 most important aeroallergenic pollens in Europe: Ambrosia, Alnus, Artemisia, Betula, Chenopodiaceae, Corylus, Cupressaceae/Taxaceae, Olea, Platanus, Poaceae, Quercus and Urtica/Parietaria. Abundance is based on 10 years of pollen records from 521 stations of the European Aeroallergen Network that were interpolated into 12 distribution maps covering most of Europe. The chapter compares the distribution maps with other types of distribution maps that are available for selected tree species and discuss two methods for making harmonized pollen source inventories: “bottom-up” and “top-down”. Both methods have advantages and disadvantages, and both need to be explored and further developed. Remote sensing has shown to be a valuable method to improve the inventories, especially the use of satellites. The full potential as well as limitations of remote sensing in relation to pollen sources remains to be explored. The review suggests that the most probable way of obtaining inventories of all 12 pollen species is to use top-down methods that use an ecosystem-based approach that for each particular species connects ecological preference, pollen counts and remote sensing.

Estudo aerobiológico da cidade do Funchal: detecção bioquímica dos principais aeroalergénios polínicos

A abordagem da doença alérgica, nomeadamente da alergia respiratória, surge reforçada com o contributo da Aerobiologia no conhecimento, evolução e controlo da doença. Por seu turno, a caracterização bioquímica dos aeroalergénios de uma região pemite avaliar a sua composição e potencial alergénico, com particular interesse para espécies vegetais cuja introdução e/ou proximidade a áreas populacionais, potenciam o aparecimento ou o aumento de sensibilização a aeroalergénios. O trabalho apresentado nesta dissertação incidiu em duas vertentes de investigação distintas, porém complementares e interdependentes: numa primeira parte, no estudo da composição aerobiológica da atmosfera da cidade do Funchal no período 2002-2004 (Capítulo I), e numa segunda parte, na caracterização bioquímica dos alergénios polínicos mais frequentes detectados no referido período (Capítulo II). Assim, numa primeira parte, a monitorização aerobiológica (incluindo pólenes, esporos de fungos e demais partículas de origem biológica), foi realizada com um polinómetro do tipo volumétrico, tipo Hirst (Burkard). Os dados obtidos foram correlacionados com os parâmetros meteorológicos e avaliado o seu significado estatístico, permitindo antever a influência das variáveis ambientais em cada tipo particular de pólen e de fungo. Constataram-se algumas diferenças no conteúdo aerobiológico comparativamente ao restante território nacional. No espectro polínico dominaram as Poaceae e Urticaceae, plantas ornamentais (Asteraceae, Boraginaceae, Cupressaceae) e as representativas da faixa norte da cidade (Ericaceae, Myrtaceae e Pinaceae). Comparativamente a outras regiões do País, o espectro polínico foi no cômputo geral semelhante, embora se destaque para esta região, a expressividade do tipo Corylus no total polínico anual. A Primavera e o início de Verão, corresponderam às épocas de maior diversidade e concentração de pólenes. As diferenças encontradas no espectro polínico da cidade do Funchal são explicadas por variáveis intrínsecas desta região, tais como a composição vegetal, a localização da cidade, condições geo-climáticas inerentes, e a influência dos parâmetros meteorológicos, nomeadamente a temperatura e humidade relativa. Verificou-se a ocorrência de um maior número de pólenes quando a humidade se situa entre os 50 e 60 %, com a precipitação e a velocidade do vento a atingir valores mais baixos. A análise da variação intra-diurna observada revelou que há uma maior representação de pólenes entre as 11 e as 16 horas. Este estudo aerobiológico confere dados para o estabelecimento do primeiro calendário polínico da região e a definição de padrões de sazonalidade. Por seu turno, a fenologia dos principais tipos polínicos observados no Funchal permite definir um padrão anual de ocorrências polínicas. Relativamente à aeromicologia, verifica-se que, durante o período de estudo foram observados esporos de fungos sobretudo na Primavera (particularmente em Abril e Maio), início do Verão e no Outono. Os Deuteromicetes representaram a classe predominante, sendo Cladosporium o fungo mais abundante na atmosfera do Funchal, cujas concentrações mais elevadas ocorrem a humidades relativas de 40 a 70%. Tal como os pólenes, os esporos apresentam um dinâmica de variação intra-diurna particular: ocorreram em maior concentração entre as 13 e as 15 horas, surgindo igualmente nas primeiras horas da madrugada e da noite. O coberto vegetal do Funchal poderá afectar a aeromicologia local, na medida em que constitui um substrato importante para o crescimento de fungos, tal como as gramíneas que proliferam em quantidade e variedade ao longo de todo o ano. Constatou-se a existência de correlação entre a ocorrência de alguns esporos de fungos e taxa polínicos mais frequentes na atmosfera do Funchal. A análise de Spearman sugere a existência de correlação entre a ocorrência de Parietaria com a de Alternaria e Drechslera. Os esporos de fungos, incluindo esporos de fetos constituem uma fracção significativa das partículas na atmosfera do Funchal, sendo cerca de 11 vezes superior à dos pólenes. Na segunda parte do trabalho, o estudo bioquímico dos aeroalergénios polínicos implicou a optimização dos procedimentos de extracção, apurando-se três técnicas para a obtenção dos perfis proteicos de extractos de pólen desde a sua fonte natural. Esta análise permitiu detectar e identificar através das técnicas de SDS-PAGE-Imunoblotting, proteínas IgE específicas do pólen de plantas possivelmente relacionadas com a sensibilização alérgica. Em consonância com a monitorização aerobiológica, foram preparados extractos de pólen de 10 espécies de plantas. Os resultados em SDS-PAGE revelaram um elevado polimorfismo proteico em todos os extractos. Obtiveram-se extractos de pólen de 7 plantas acerca das quais não se conheciam estudos desta natureza: Acacia mearnsii, Avena barbata, Carduus squarrosus, Carlina salicifolia, Datura candida, Echium nervosum e Urtica membranosa. Por imunoblotting detectou-se no soro de dois pacientes IgE específica a proteínas de D. candida, com pesos moleculares entre 150,71 ± 0,05 e 58,92 ± 5,67 KDa. O soro de um deles reagiu igualmente com 5 alergénios de P. pinaster com 42,02 ± 0,05; 38,61 ± 0,46 ; 35,70 ± 7,78 ; 31,82 ± 2,11 e 27,45 ± 0,46 KDa. No soro de outro indivíduo foi detectada IgE específica para uma proteína de A. mearnsii com 66,66 ± 0,13 KDa, e outra de C. squarrosus,de 67,53 ± 0,29 KDa. É de destacar a sensibilidade e fiabilidade da técnica de Imunoblotting, e o interesse em incluila na metodologia de diagnóstico complementar da alergia respiratória. A ampla difusão de espécies como Ricinus communis, Urtica spp. ou A. mearnsii e sua proximidade à presença humana, reforçam, por um lado, a importância da vigilância aerobiológica, e por outro lado, requer uma definição do seu carácter alergénico para a população desta região.

Bioinformatical and in vitro approaches to essential oil-induced matrix metalloproteinase inhibition

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

A new modern analogue reference dataset and its application to the 430-kyr pollen record from Lake Biwa

This study presents a newly compiled dataset of modern pollen and climate data from 798 sites across Japan and the Russian Far East. This comprehensive reference dataset combined with the modern analogue technique (MAT) provides a powerful tool for pollen-based reconstruction of the Quaternary Northwest Pacific climate. Pollen-derived reconstruction of the modern climate at the reference pollen-sampling sites matches well with the estimated modern climate values (R2 values vary between 0.79 and 0.95, and RMSEP values vary between 5.8 and 9.7% of the modern climatic range for all nine tested variables). The successful testing of the method encourages its application to the fossil pollen records. We used a coarse-resolution pollen record from Lake Biwa to reconstruct glacial-interglacial climate dynamics in central Japan since ~438 kyr and compared it to the earlier reconstruction based on a less representative reference dataset. The current and earlier results consistently demonstrate that the coldest glacial intervals experienced pronounced cooling in winter and moderate cooling in summer, supporting the growth of cool mixed forest (COMX) where warm mixed forest (WAMX) predominates today. During the last glacial, maximum (~24 kyr BP) mean temperatures of the coldest (MTCO) and warmest (MTWA) month were about -13 °C (RMSEP = 2.34 °C) and 21 °C (RMSEP = 1.66 °C) respectively, and annual precipitation (PANN) was about 800 mm (RMSEP = 158.06 mm). During the thermal optimums of the interglacial intervals, the temperatures of the coldest and warmest month were above 0 °C and 25 °C respectively, leading to the reconstruction of WAMX and temperate conifer forest (TECO). Although both these vegetation types grow in the southern part of Japan today, WAMX requires warmer space. The presence of WAMX during marine isotope stages (MIS) 11 and 1, and its absence during MIS 9 and MIS 5 contradict the marine isotope and Antarctic ice records, suggesting that the latter two interglacials were the warmest of the last 800 kyr. The apparent contradiction allows at least three different explanations including low temporal resolution of the pollen record; different trends in CO2 concentrations during 'short' and 'long' interglacials; and regional climate variability and non-linear response of different regions to the global forcing. More definitive conclusions will be possible on the basis of forthcoming high-resolution pollen records from central Japan.

Reference datasets and pollen record from sediment core YAK, Yakumo, SW Hokkaido

This study reconstructs middle and late Holocene vegetation and climate dynamics in the Oshima Peninsula, SW Hokkaido, using the published method of biome reconstruction and modern analogue technique applied to the Yakumo pollen record (42°17'03''N, 140°15'34''E) spanning the last 5500 years. Two previously published matrices assigning Japanese plant/pollen taxa to the major vegetation types (biomes) are tested using a newly compiled dataset of 78 surface pollen spectra from Hokkaido. With both matrices showing strengths and weaknesses in reconstructing cool mixed and temperate deciduous forests of Hokkaido, the results suggest the necessity to consider the whole list of identified terrestrial pollen taxa for generating robust vegetation reconstructions for northern Japan. Applied to the fossil pollen data, both biome-reconstruction approaches demonstrate consistently that oak-dominated cool mixed forest spread in the study region between 5.5 and 3.6 cal ka BP and was subsequently replaced by beech-dominated temperate deciduous forest. The pollen-based climate reconstruction suggests this change in the vegetation composition was caused by a shift from cooler and drier than present climate to warmer and wetter, similar to modern conditions about 3.6 cal ka BP. Comparing the pollen-based reconstruction results with the published marine records from the NW Pacific, the reconstructed vegetation and climate dynamics can be satisfactorily explained by the greater role played by the warm Tsushima Current in the Sea of Japan and in the Tsugaru Strait during the middle and late Holocene. An increase in sea surface temperatures west and south of the study site would favour air temperature rise and moisture uptake and cause an increase in precipitation and snow accumulation in the western part of Hokkaido during the late Holocene.

Pollen and spores record, and paleotemperature reconstructions for mid-Holocene sediments of the Northwest Pacific

Sannai-Maruyama is one of the most famous and best-researched mid-Holocene (mid-Jomon) archaeological sites in Japan, because of a large community of people for a long period. Archaeological studies have shown that the Jomon people inhabited the Sannai-Maruyama site from 5.9-4.2 +/- 0.1 cal. kyr B.P. However, a continuous record of the terrestrial and marine environments around the site has not been available. Core KT05-7 PC-02, was recovered from Mutsu Bay, only 20 km from the site, for the reconstruction of high-resolution time series of environmental records, including sea surface temperature (SST). C37 alkenone SSTs showed clear fluctuations, with four periods of high (8.4-7.9, 7.0-5.9, 5.1-4.1, and 2.3-1.4 cal. kyr B.P.) and four of low (-8.4, 7.9-7.0, 5.9-5.1, and 4.1-2.3 cal. kyr B.P.) SST. Thus, each SST cycle lasted 1.0-2.0 kyr, and the amplitude of fluctuation was about 1.5-2.0 °C. Total organic carbon (TOC) and C37 alkenone contents, and the TOC/total nitrogen ratio indicate that marine biogenic production was low before 7.0 cal. kyr B.P., but was clearly increased between 5.9 and 4.0 cal. kyr B.P., because of stronger vertical mixing. During the period when the community at the site prospered (between 5.9 and 4.2 +/- 0.1 cal. kyr B.P.), the terrestrial climate was relatively warm. The high relative abundance of pollen of both Castanea and Quercus subgen. Cyclobalanopsis supports the interpretation that the local climate was optimal for human habitation. Between 5.9 and 5.1 cal. kyr B.P., in spite of warm terrestrial climates, the C37 alkenone SST was low; this apparent discrepancy may be attributed to the water column structure in the Tsugaru Strait, which differed from the modern condition. The evidence suggests that at about 5.9 cal. kyr B.P, high productivity of marine resources such as fish and shellfish and a warm terrestrial climate led to the establishment of a human community at the Sannai-Maruyama site. Then, at about 4.1 +/- 0.1 cal. kyr B.P., abrupt marine and terrestrial cooling, indicated by a decrease of about 2 °C in the C37 alkenone SST and an increase in pollen of taxa of cooler climates, led to a reduced terrestrial food supply, causing the people to abandon the site. The timing of the abandonment is consistent with the timing (around 4.0-4.3 cal. kyr B.P.) of the decline of civilizations in north Mesopotamia and along the Yangtze River. These findings suggest that a temperature rise of ~2 °C in this century as a result of global warming could have a great impact on the human community and especially on agriculture, despite the advances of contemporary society.

Palynology and dinoflagellate counts of surface sediments, and sea surface conditions, of sites in the North Pacific

Palynological analyses were performed on 53 surface sediment samples from the North Pacific Ocean, including the Bering and Okhotsk Seas (37-64°N, 144°E-148°W), in order to document the relationships between the dinocyst distribution and sea-surface conditions (temperatures, salinities, primary productivity and sea-ice cover). Samples are characterized by concentrations ranging from 18 to 143816 cysts/cm**3 and the occurrence of 32 species. A canonical correspondence analysis (CCA) was carried out to determine the relationship between environmental variables and the distribution of dinocyst taxa. The first and second axes represent, respectively, 47% and 17.8% of the canonical variance. Axis 1 is positively correlated with all parameters except to the sea-ice and primary productivity in August, which are on the negative side. Results indicate that the composition of dinocyst assemblages is mostly controlled by temperature and that all environmental variables are correlated together. The CCA distinguishes 3 groups of dinocysts: the heterotrophic taxa, the genera Impagidinium and Spiniferites as well as the cyst of Pentapharsodinium dalei and Operculodinium centrocarpum. Five assemblage zones can be distinguished: 1) the Okhotsk Sea zone, which is associated to temperate and eutrophic conditions, seasonal upwellings and Amur River discharges. It is characterized by the dominance of O. centrocarpum, Brigantedinium spp. and Islandinium minutum; 2) the Western Subarctic Gyre zone with subpolar and mesotrophic conditions due to the Kamchatka Current and Alaska Stream inflows. Assemblages are dominated by Nematosphaeropsis labyrinthus, Pyxidinopsis reticulata and Brigantedinium spp.; 3) the Bering Sea zone, depicting a subpolar environment, influenced by seasonal upwellings and inputs from the Anadyr and Yukon Rivers. It is characterized by the dominance of I. minutum and Brigantedinium spp.; 4) the Alaska Gyre zone with temperate conditions and nutrient-enriched surface waters, which is dominated by N. labyrinthus and Brigantedinium spp. and 5) the Kuroshio Extension-North Pacific-Subarctic Current zone characterized by a subtropical and oligotrophic environment, which is dominated by O. centrocarpum, N. labyrinthus and warm taxa of the genus Impagidinium. Transfer functions were tested using the modern analog technique (MAT) on the North Pacific Ocean (= 359 sites) and the entire Northern Hemisphere databases ( = 1419 sites). Results confirm that the updated Northern Hemisphere database is suitable for further paleoenvironmental reconstructions, and the best results are obtained for temperatures with an accuracy of +/-1.7 °C.

Miocene microflora of Belorado (Spain)

Neogene deposits from Belorado (Province de Burgos, Spain) in the NE border of the Duero Basin have been analyzed. The palynologic analysis of the samples suggests the existence of arboreal landscapes associated with the herbaceous cover creating belts of vegetation around restricted aquatic areas (marshy and lacustrine environments). The characteristics of the palynomorph assemblages allow to define a warm-template climate with strong seasons. The age of these deposits could be included in the middle Miocene (Aragonian).