Classificação automática de padrões projetados por um sistema de luz estruturada

One of the main problems in Computer Vision and Close Range Digital Photogrammetry is 3D reconstruction. 3D reconstruction with structured light is one of the existing techniques and which still has several problems, one of them the identification or classification of the projected targets. Approaching this problem is the goal of this paper. An area based method called template matching was used for target classification. This method performs detection of area similarity by correlation, which measures the similarity between the reference and search windows, using a suitable correlation function. In this paper the modified cross covariance function was used, which presented the best results. A strategy was developed for adaptative resampling of the patterns, which solved the problem of deformation of the targets due to object surface inclination. Experiments with simulated and real data were performed in order to assess the efficiency of the proposed methodology for target detection. The results showed that the proposed classification strategy works properly, identifying 98% of targets in plane surfaces and 93% in oblique surfaces.

Random regression models using Legendre polynomials or linear splines for test-day milk yield of dairy Gyr (Bos indicus) cattle

Studies investigating the use of random regression models for genetic evaluation of milk production in Zebu cattle are scarce. In this study, 59,744 test-day milk yield records from 7,810 first lactations of purebred dairy Gyr (Bos indicus) and crossbred (dairy Gyr × Holstein) cows were used to compare random regression models in which additive genetic and permanent environmental effects were modeled using orthogonal Legendre polynomials or linear spline functions. Residual variances were modeled considering 1, 5, or 10 classes of days in milk. Five classes fitted the changes in residual variances over the lactation adequately and were used for model comparison. The model that fitted linear spline functions with 6 knots provided the lowest sum of residual variances across lactation. On the other hand, according to the deviance information criterion (DIC) and Bayesian information criterion (BIC), a model using third-order and fourth-order Legendre polynomials for additive genetic and permanent environmental effects, respectively, provided the best fit. However, the high rank correlation (0.998) between this model and that applying third-order Legendre polynomials for additive genetic and permanent environmental effects, indicates that, in practice, the same bulls would be selected by both models. The last model, which is less parameterized, is a parsimonious option for fitting dairy Gyr breed test-day milk yield records. © 2013 American Dairy Science Association.

Comparison of random regression models to estimate genetic parameters for milk production in Guzerat (Bos indicus) cows

Random regression models have been widely used to estimate genetic parameters that influence milk production in Bos taurus breeds, and more recently in B. indicus breeds. With the aim of finding appropriate random regression model to analyze milk yield, different parametric functions were compared, applied to 20,524 test-day milk yield records of 2816 first-lactation Guzerat (B. indicus) cows in Brazilian herds. The records were analyzed by random regression models whose random effects were additive genetic, permanent environmental and residual, and whose fixed effects were contemporary group, the covariable cow age at calving (linear and quadratic effects), and the herd lactation curve. The additive genetic and permanent environmental effects were modeled by the Wilmink function, a modified Wilmink function (with the second term divided by 100), a function that combined third-order Legendre polynomials with the last term of the Wilmink function, and the Ali and Schaeffer function. The residual variances were modeled by means of 1, 4, 6, or 10 heterogeneous classes, with the exception of the last term of the Wilmink function, for which there were 1, from 0.20 to 0.33. Genetic correlations between adjacent records were high values (0.83-0.99), but they declined when the interval between the test-day records increased, and were negative between the first and last records. The model employing the Ali and Schaeffer function with six residual variance classes was the most suitable for fitting the data. © FUNPEC-RP.

Estimativas de parâmetros genéticos para produção de leite em búfalas por modelos de repetibilidade, multi-característica e de regressão aleatória

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Utilização da geoestatística na construção de mapas de temperatura média mensal para o Estado do Paraná

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Persistência da lactação e Influência da estrutura de dados sobre a estimação de parâmetros genéticos para a produção de leite de bovinos da raça Holandesa

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Genetic parameters for production traits of dairy Gyr (Bos indicus) x Holstein cattle estimated with a random regression model

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Random regression models to estimate genetic parameters for milk production of Guzerat cows using orthogonal Legendre polynomials

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Predicting breeding values for milk yield of Guzera (Bos indicus) cows using random regression models

Given the importance of Guzera breeding programs for milk production in the tropics, the objective of this study was to compare alternative random regression models for estimation of genetic parameters and prediction of breeding values. Test-day milk yields records (TDR) were collected monthly, in a maximum of 10 measurements. The database included 20,524 records of first lactation from 2816 Guzera cows. TDR data were analyzed by random regression models (RRM) considering additive genetic, permanent environmental and residual effects as random and the effects of contemporary group (CG), calving age as a covariate (linear and quadratic effects) and mean lactation curve as fixed. The genetic additive and permanent environmental effects were modeled by RRM using Wilmink, All and Schaeffer and cubic B-spline functions as well as Legendre polynomials. Residual variances were considered as heterogeneous classes, grouped differently according to the model used. Multi-trait analysis using finite-dimensional models (FDM) for testday milk records (TDR) and a single-trait model for 305-days milk yields (default) using the restricted maximum likelihood method were also carried out as further comparisons. Through the statistical criteria adopted, the best RRM was the one that used the cubic B-spline function with five random regression coefficients for the genetic additive and permanent environmental effects. However, the models using the Ali and Schaeffer function or Legendre polynomials with second and fifth order for, respectively, the additive genetic and permanent environmental effects can be adopted, as little variation was observed in the genetic parameter estimates compared to those estimated by models using the B-spline function. Therefore, due to the lower complexity in the (co)variance estimations, the model using Legendre polynomials represented the best option for the genetic evaluation of the Guzera lactation records. An increase of 3.6% in the accuracy of the estimated breeding values was verified when using RRM. The ranks of animals were very close whatever the RRM for the data set used to predict breeding values. Considering P305, results indicated only small to medium difference in the animals' ranking based on breeding values predicted by the conventional model or by RRM. Therefore, the sum of all the RRM-predicted breeding values along the lactation period (RRM305) can be used as a selection criterion for 305-day milk production. (c) 2014 Elsevier B.V. All rights reserved.

A benchmark of kriging-based infill criteria for noisy optimization

Responses of many real-world problems can only be evaluated perturbed by noise. In order to make an efficient optimization of these problems possible, intelligent optimization strategies successfully coping with noisy evaluations are required. In this article, a comprehensive review of existing kriging-based methods for the optimization of noisy functions is provided. In summary, ten methods for choosing the sequential samples are described using a unified formalism. They are compared on analytical benchmark problems, whereby the usual assumption of homoscedastic Gaussian noise made in the underlying models is meet. Different problem configurations (noise level, maximum number of observations, initial number of observations) and setups (covariance functions, budget, initial sample size) are considered. It is found that the choices of the initial sample size and the covariance function are not critical. The choice of the method, however, can result in significant differences in the performance. In particular, the three most intuitive criteria are found as poor alternatives. Although no criterion is found consistently more efficient than the others, two specialized methods appear more robust on average.

Desarrollo, implementación y análisis de un modelo cinemático local de velocidades para Costa Rica basado en la integración y homogenización de datos de estaciones GNSS continuas

El primer procesamiento estricto realizado con el software científico Bernese y contemplando las más estrictas normas de cálculo recomendadas internacionalmente, permitió obtener un campo puntual de alta exactitud, basado en la integración y estandarización de los datos de una red GPS ubicada en Costa Rica. Este procesamiento contempló un total de 119 semanas de datos diarios, es decir unos 2,3 años, desde enero del año 2009 hasta abril del año 2011, para un total de 30 estaciones GPS, de las cuales 22 están ubicadas en el territorio nacional de Costa Rica y 8 internaciones pertenecientes a la red del Sistema Geocéntrico para las Américas (SIRGAS). Las denominadas soluciones semilibres generaron, semana a semana, una red GPS con una alta exactitud interna definida por medio de los vectores entre las estaciones y las coordenadas finales de la constelación satelital. La evaluación semanal dada por la repetibilidad de las soluciones brindó en promedio errores de 1,7 mm, 1,4 mm y 5,1 mm en las componentes [n e u], confirmando una alta consistencia en estas soluciones. Aunque las soluciones semilibres poseen una alta exactitud interna, las mismas no son utilizables para fines de análisis cinemático, pues carecen de un marco de referencia. En Latinoamérica, la densificación del Marco Internacional Terrestre de Referencia (ITRF), está representado por la red de estaciones de operación continua GNSS de SIRGAS, denominada como SIRGAS-CON. Por medio de las denominadas coordenadas semanales finales de las 8 estaciones consideradas como vínculo, se refirió cada una de las 119 soluciones al marco SIRGAS. La introducción del marco de referencia SIRGAS a las soluciones semilibres produce deformaciones en estas soluciones. Las deformaciones de las soluciones semilibres son producto de las cinemática de cada una de las placas en las que se ubican las estaciones de vínculo. Luego de efectuado el amarre semanal a las coordenadas SIRGAS, se hizo una estimación de los vectores de velocidad de cada una de las estaciones, incluyendo las de amarre, cuyos valores de velocidad se conocen con una alta exactitud. Para la determinación de las velocidades de las estaciones costarricenses, se programó una rutina en ambiente MatLab, basada en una ajuste por mínimos cuadrados. Los valores obtenidos en el marco de este proyecto en comparación con los valores oficiales, brindaron diferencias promedio del orden de los 0,06 cm/a, -0,08 cm/a y -0,10 cm/a respectivamente para las coordenadas [X Y Z]. De esta manera se logró determinar las coordenadas geocéntricas [X Y Z]T y sus variaciones temporales [vX vY vZ]T para el conjunto de 22 estaciones GPS de Costa Rica, dentro del datum IGS05, época de referencia 2010,5. Aunque se logró una alta exactitud en los vectores de coordenadas geocéntricas de las 22 estaciones, para algunas de las estaciones el cálculo de las velocidades no fue representativo debido al relativo corto tiempo (menos de un año) de archivos de datos. Bajo esta premisa, se excluyeron las ocho estaciones ubicadas al sur de país. Esto implicó hacer una estimación del campo local de velocidades con solamente veinte estaciones nacionales más tres estaciones en Panamá y una en Nicaragua. El algoritmo usado fue el denominado Colocación por Mínimos Cuadrados, el cual permite la estimación o interpolación de datos a partir de datos efectivamente conocidos, el cual fue programado mediante una rutina en ambiente MatLab. El campo resultante se estimó con una resolución de 30' X 30' y es altamente constante, con una velocidad resultante promedio de 2,58 cm/a en una dirección de 40,8° en dirección noreste. Este campo fue validado con base en los datos del modelo VEMOS2009, recomendado por SIRGAS. Las diferencias de velocidad promedio para las estaciones usadas como insumo para el cálculo del campo fueron del orden los +0,63 cm/a y +0,22 cm/a para los valores de velocidad en latitud y longitud, lo que supone una buena determinación de los valores de velocidad y de la estimación de la función de covarianza empírica, necesaria para la aplicación del método de colocación. Además, la grilla usada como base para la interpolación brindó diferencias del orden de -0,62 cm/a y -0,12 cm/a para latitud y longitud. Adicionalmente los resultados de este trabajo fueron usados como insumo para hacer una aproximación en la definición del límite del llamado Bloque de Panamá dentro del territorio nacional de Costa Rica. El cálculo de las componentes del Polo de Euler por medio de una rutina programa en ambiente MatLab y aplicado a diferentes combinaciones de puntos no brindó mayores aportes a la definición física de este límite. La estrategia lo que confirmó fue simplemente la diferencia en la dirección de todos los vectores velocidad y no permitió reveló revelar con mayor detalle una ubicación de esta zona dentro del territorio nacional de Costa Rica. ABSTRACT The first strict processing performed with the Bernese scientific software and contemplating the highest standards internationally recommended calculation, yielded a precise field of high accuracy, based on the integration and standardization of data from a GPS network located in Costa Rica. This processing watched a total of 119 weeks of daily data, is about 2.3 years from January 2009 to April 2011, for a total of 30 GPS stations, of which 22 are located in the country of Costa Rica and 8 hospitalizations within the network of Geocentric System for the Americas (SIRGAS). The semi-free solutions generated, every week a GPS network with high internal accuracy defined by vectors between stations and the final coordinates of the satellite constellation. The weekly evaluation given by repeatability of the solutions provided in average errors of 1.7 mm 1.4 mm and 5.1 mm in the components [n e u], confirming a high consistency in these solutions. Although semi-free solutions have a high internal accuracy, they are not used for purposes of kinematic analysis, because they lack a reference frame. In Latin America, the densification of the International Terrestrial Reference Frame (ITRF), is represented by a network of continuously operating GNSS stations SIRGAS, known as SIRGAS-CON. Through weekly final coordinates of the 8 stations considered as a link, described each of the solutions to the frame 119 SIRGAS. The introduction of the frame SIRGAS to semi-free solutions generates deformations. The deformations of the semi-free solutions are products of the kinematics of each of the plates in which link stations are located. After SIRGAS weekly link to SIRGAS frame, an estimate of the velocity vectors of each of the stations was done. The velocity vectors for each SIRGAS stations are known with high accuracy. For this calculation routine in MatLab environment, based on a least squares fit was scheduled. The values obtained compared to the official values, gave average differences of the order of 0.06 cm/yr, -0.08 cm/yr and -0.10 cm/yr respectively for the coordinates [XYZ]. Thus was possible to determine the geocentric coordinates [XYZ]T and its temporal variations [vX vY vZ]T for the set of 22 GPS stations of Costa Rica, within IGS05 datum, reference epoch 2010.5. The high accuracy vector for geocentric coordinates was obtained, however for some stations the velocity vectors was not representative because of the relatively short time (less than one year) of data files. Under this premise, the eight stations located in the south of the country were excluded. This involved an estimate of the local velocity field with only twenty national stations plus three stations in Panama and Nicaragua. The algorithm used was Least Squares Collocation, which allows the estimation and interpolation of data from known data effectively. The algorithm was programmed with MatLab. The resulting field was estimated with a resolution of 30' X 30' and is highly consistent with a resulting average speed of 2.58 cm/y in a direction of 40.8° to the northeast. This field was validated based on the model data VEMOS2009 recommended by SIRGAS. The differences in average velocity for the stations used as input for the calculation of the field were of the order of +0.63 cm/yr, +0.22 cm/yr for the velocity values in latitude and longitude, which is a good determination velocity values and estimating the empirical covariance function necessary for implementing the method of application. Furthermore, the grid used as the basis for interpolation provided differences of about -0.62 cm/yr, -0.12 cm/yr to latitude and longitude. Additionally, the results of this investigation were used as input to an approach in defining the boundary of Panama called block within the country of Costa Rica. The calculation of the components of the Euler pole through a routine program in MatLab and applied to different combinations of points gave no further contributions to the physical definition of this limit. The strategy was simply confirming the difference in the direction of all the velocity vectors and not allowed to reveal more detail revealed a location of this area within the country of Costa Rica.

Computing with infinite networks

For neural networks with a wide class of weight-priors, it can be shown that in the limit of an infinite number of hidden units the prior over functions tends to a Gaussian process. In this paper analytic forms are derived for the covariance function of the Gaussian processes corresponding to networks with sigmoidal and Gaussian hidden units. This allows predictions to be made efficiently using networks with an infinite number of hidden units, and shows that, somewhat paradoxically, it may be easier to compute with infinite networks than finite ones.

Computation with infinite neural networks

For neural networks with a wide class of weight priors, it can be shown that in the limit of an infinite number of hidden units, the prior over functions tends to a gaussian process. In this article, analytic forms are derived for the covariance function of the gaussian processes corresponding to networks with sigmoidal and gaussian hidden units. This allows predictions to be made efficiently using networks with an infinite number of hidden units and shows, somewhat paradoxically, that it may be easier to carry out Bayesian prediction with infinite networks rather than finite ones.

Flexible Gaussian process wind field models

This technical report builds on previous reports to derive the likelihood and its derivatives for a Gaussian Process with a modified Bessel function based covariance function. The full derivation is shown. The likelihood (with gradient information) can be used in maximum likelihood procedures (i.e. gradient based optimisation) and in Hybrid Monte Carlo sampling (i.e. within a Bayesian framework).

Non-zero mean Gaussian process prior wind field models

This report outlines the derivation and application of a non-zero mean, polynomial-exponential covariance function based Gaussian process which forms the prior wind field model used in 'autonomous' disambiguation. It is principally used since the non-zero mean permits the computation of realistic local wind vector prior probabilities which are required when applying the scaled-likelihood trick, as the marginals of the full wind field prior. As the full prior is multi-variate normal, these marginals are very simple to compute.