The antigen 43 structure reveals a molecular velcro-like mechanism of autotransporter-mediated bacterial clumping

Aggregation and biofilm formation are critical mechanisms for bacterial resistance to host immune factors and antibiotics. Autotransporter (AT) proteins, which represent the largest group of outer-membrane and secreted proteins in Gram-negative bacteria, contribute significantly to these phenotypes. Despite their abundance and role in bacterial pathogenesis, most AT proteins have not been structurally characterized, and there is a paucity of detailed information with regard to their mode of action. Here we report the structure–function relationships of Antigen 43 (Ag43a), a prototypic self-associating AT protein from uropathogenic Escherichia coli. The functional domain of Ag43a displays a twisted L-shaped β-helical structure firmly stabilized by a 3D hydrogen-bonded scaffold. Notably, the distinctive Ag43a L shape facilitates self-association and cell aggregation. Combining all our data, we define a molecular “Velcro-like” mechanism of AT-mediated bacterial clumping, which can be tailored to fit different bacterial lifestyles such as the formation of biofilms.

Schizophrenia Genetic Variants are not Associated with Intelligence

Background Schizophrenia is associated with lower pre-morbid intelligence (IQ) in addition to (pre-morbid) cognitive decline. Both schizophrenia and IQ are highly heritable traits. Therefore, we hypothesized that genetic variants associated with schizophrenia, including copy number variants (CNVs) and a polygenic schizophrenia (risk) score (PSS), may influence intelligence. Method IQ was estimated with the Wechsler Adult Intelligence Scale (WAIS). CNVs were determined from single nucleotide polymorphism (SNP) data using the QuantiSNP and PennCNV algorithms. For the PSS, odds ratios for genome-wide SNP data were calculated in a sample collected by the Psychiatric Genome-Wide Association Study (GWAS) Consortium (8690 schizophrenia patients and 11 831 controls). These were used to calculate individual PSSs in our independent sample of 350 schizophrenia patients and 322 healthy controls. Results Although significantly more genes were disrupted by deletions in schizophrenia patients compared to controls (p = 0.009), there was no effect of CNV measures on IQ. The PSS was associated with disease status (R 2 = 0.055, p = 2.1 × 10 -7) and with IQ in the entire sample (R 2 = 0.018, p = 0.0008) but the effect on IQ disappeared after correction for disease status. Conclusions Our data suggest that rare and common schizophrenia-associated variants do not explain the variation in IQ in healthy subjects or in schizophrenia patients. Thus, reductions in IQ in schizophrenia patients may be secondary to other processes related to schizophrenia risk. © Cambridge University Press 2013.

Effects of dietary phosphorus and calcium-to-phosphorus ratio on calcium and bone metabolism in healthy 20- to 43-year-old Finnish women

Dietary habits have changed during the past decades towards an increasing consumption of processed foods, which has notably increased not only total dietary phosphorus (P) intake, but also intake of P from phosphate additives. While the intake of calcium (Ca) in many Western countries remains below recommended levels (800 mg/d), the usual daily P intake in a typical Western diet exceeds by 2- to 3-fold the dietary guidelines (600 mg/d). The effects of high P intake in healthy humans have been investigated seldom. In this thesis healthy 20- to 43-year-old women were studied. In the first controlled study (n = 14), we examined the effects of P doses, and in a cross-sectional study (n = 147) the associations of habitual P intakes with Ca and bone metabolism. In this same cross-sectional study, we also investigated whether differences exist between dietary P originating from natural P sources and phosphate additives. The second controlled study (n = 12) investigated whether by increasing the Ca intake, the effects of a high P intake could be reduced. The associations of habitual dietary calcium-to-phosphorus ratios (Ca:P ratio) with Ca and bone metabolism were determined in a cross-sectional study design (n = 147). In the controlled study, the oral intake of P doses (495, 745, 1245 and 1995 mg/d) with a low Ca intake (250 mg/d) increased serum parathyroid hormone (S-PTH) concentration in a dose-dependent manner. In addition, the highest P dose decreased serum ionized calcium (S-iCa) concentration and bone formation and increased bone resorption. In the second controlled study with a dietary P intake of 1850 mg/d, by increasing the Ca intake from 480 mg/d to 1080 mg/d and then to 1680 mg/d, the S-PTH concentration decreased, the S-iCa concentration increased and bone resorption decreased dose-dependently. However, not even the highest Ca intake could counteract the effect of high dietary P on bone formation, as indicated by unchanged bone formation activity. In the cross-sectional studies, a higher habitual dietary P intake (>1650 mg/d) was associated with lower S-iCa and higher S-PTH concentrations. The consumption of phosphate additive-containing foods was associated with a higher S-PTH concentration. Moreover, habitual low dietary Ca:P ratios (≤0.50, molar ratio) were associated with higher S-PTH concentrations and 24-h urinary Ca excretions, suggesting that low dietary Ca:P ratios may interfere with homeostasis of Ca metabolism and increase bone resorption. In summary, excessive dietary P intake in healthy Finnish women seems to be detrimental to Ca and bone metabolism, especially when dietary Ca intake is low. The results indicate that by increasing dietary Ca intake to the recommended level, the negative effects of high P intake could be diminished, but not totally prevented. These findings imply that phosphate additives may be more harmful than natural P. Thus, reduction of an excessively high dietary P intake is also beneficial for healthy individuals.

The use of metabolomics to monitor simultaneous changes in metabolic variables following supramaximal low volume high intensity exercise

High Intensity Exercise (HIE) stimulates greater physiological remodeling when compared to workload matched low-moderate intensity exercise. This study utilized an untargeted metabolomics approach to examine the metabolic perturbations that occur following two workload matched supramaximal low volume HIE trials. In a randomized order, 7 untrained males completed two exercise protocols separated by one week; 1) HIE150%: 30 x 20s cycling at 150% VO2peak, 40s passive rest; 2) HIE300%: 30 x 10s cycling at 300% VO2peak, 50 s passive rest. Total exercise duration was 30 minutes for both trials. Blood samples were taken at rest, during and immediately following exercise and at 60 minutes post exercise. Gas chromatography-mass spectrometry (GC-MS) analysis of plasma identified 43 known metabolites of which 3 demonstrated significant fold changes (HIE300% compared to the HIE150% value) during exercise, 14 post exercise and 23 at the end of the recovery period. Significant changes in plasma metabolites relating to lipid metabolism [fatty acids: dodecanoate (p=0.042), hexadecanoate (p=0.001), octadecanoate (p=0.001)], total cholesterol (p=0.001), and glycolysis [lactate (p=0.018)] were observed following exercise and during the recovery period. The HIE300% protocol elicited greater metabolic changes relating to lipid metabolism and glycolysis when compared to HIE150% protocol. These changes were more pronounced throughout the recovery period rather than during the exercise bout itself. Data from the current study demonstrate the use of metabolomics to monitor intensity-dependent changes in multiple metabolic pathways following exercise. The small sample size indicates a need for further studies in a larger sample cohort to validate these findings.

Response of fungal and actinobacterial communities to water-level drawdown in boreal peatland sites

"We used PCR-DGGE fingerprinting and direct sequencing to analyse the response of fungal and actinobacterial communities to changing hydrological conditions at 3 different sites in a boreal peatland complex in Finland. The experimental design involved a short-term (3 years; STD) and a long-term (43 years; LTD) water-level drawdown. Correspondence analyses of DGGE bands revealed differences in the communities between natural sites representing the nutrient-rich mesotrophic fen, the nutrient-poorer oligotrophic fen, and the nutrient-poor ombrotrophic bog. Still, most fungi and actinobacteria found in the pristine peatland seemed robust to the environmental variables. Both fungal and actinobacterial diversity was higher in the fens than in the bog. Fungal diversity increased significantly after STD whereas actinobacterial diversity did not respond to hydrology. Both fungal and actinobacterial communities became more similar between peatland types after LTD, which was not apparent after STD. Most sequences clustered equally between the two main fungal phyla Ascomycota and Basidiomycota. Sequencing revealed that basidiomycetes may respond more (either positively or negatively) to hydrological changes than ascomycetes. Overall, our results suggest that fungal responses to water-level drawdown depend on peatland type. Actinobacteria seem to be less sensitive to hydrological changes, although the response of some may similarly depend on peatland type. (C) 2009 Elsevier Ltd. All rights reserved."

High accuracy curve fits for chirality, length and diameter dependent initial modulus of single walled carbon nanotubes

Many previous studies regarding the estimation of mechanical properties of single walled carbon nanotubes (SWCNTs) report that, the modulus of SWCNTs is chirality, length and diameter dependent. Here, this dependence is quantitatively described in terms of high accuracy curve fit equations. These equations allow us to estimate the modulus of long SWCNTs (lengths of about 100-120 nm) if the value at the prescribed low lengths (lengths of about 5-10 nm) is known. This is supposed to save huge computational time and expense. Also, based on the observed length dependent behavior of SWCNT initial modulus, we predict that, SWCNT mechanical properties such as Young's modulus, secant modulus, maximum tensile strength, failure strength, maximum tensile strain and failure strain might also exhibit the length dependent behavior along with chirality and length dependence. (C) 2010 Elsevier B.V. All rights reserved.

Letras, 2000-2001, nº 42-43 (número completo)

Contenido: Garcilaso de la Vega: 1501?-2001 -- El concepto de "transformación" y sus aplicaciones al análisis de la poesía de Garcilaso / Sofía M. Carrizo Rueda – Algunas observaciones, a principios de un nuevo milenio, en torno a las comedias de Calderón de la Barca / Lilia E. Ferrario de Orduna – Palomeque, don Quijote, Cervantes: tres lectores de Cirongilio de Tracia de Bernardo de Vargas / Javier Roberto González – Cervantes: riesgo del vivir, azar y Providencia. Una lectura en clave bíblica y patrística / Teresa Herráiz de Tresca –La justicia divina o el orlo Amoris en el Amadis de Gaula / Silivia C. Lastra Paz -- Catálogo descriptivo de libros de caballerías castellanos, XIV. Otro Palmerín de Olivia recuperado: Sevilla, Jácome Cromberger, 1547 (Con algunas reflexiones sobre el arte de editar textos impresos) / José Manuel Lucía Megías – La defensa de la poesía en el Perú colonial: El Discurso en Loor de la Poesía / Graciela Maturo – Sobre la evolución de -nn-, -nw- y -w- interiores intervocálicos en la onomástica geográfica del Amadís de Gaula / Aquilino Suárez Pallasá – Reforma y Contrarreforma en las artes plásticas / Carmen Balzer – Tomás Moro y el Humanismo cristiano / Inés de Cassagne – Algunos poetas latinos del Humanismo / Raúl Lavalle – Reseñas bibliográficas

Teología, 1970, Tomo VIII nº 018 (número completo)

Presentación de la Primera Semana Argentina de Teología / Estanislao Karlic -- Estudio sociológico sobre la imagen de Dios en el hombre medio de Córdoba / Eva Chamorro Greca -- Las vías de la creencia en Dios / Domingo Basso -- Crónica de la Facultad

Estudio preliminar de las causas de pérdidas de viabilidad en la semilla de sorgo T-43 Sorghum bicolor (Linn) Moench

Este trabajo se realizó en dos investigativas La primera estuvo orientada en determinar si el tamaño de la semilla de sorgo T-43, tenía influencia en la viabilidad, lo cual se comprobó a nivel de campo y laboratorio, donde los porcentajes diferencias en ambos porcentajes. Cabe hacer mención que los datos obtenidos no son concluyentes, por carecer de repeticiones suficientes, pero si presentan tendencias en favor de la semilla clasificada con tamiz 10, el cual mostró los mayores porcentajes de germinación: de ello podemos deducir que la semilla para uso en la siembra se debe clasificar por tamaño. La segunda fase consisto en cosechar en tres épocas diferentes (tres diferentes humedades de semilla), los que se secaron al sol a 13 porciento de humedad, almacenándose en dos ambientes diferentes (cuarto frió, ambiente natural), los resultados no fueron concluyentes, ya que no se obtuvieron diferencias significativas en lo que se refiere a los ambientes de almacenamiento y los momentos de recolecta; por lo que la pérdida de viabilidad observada se atribuyen a otros factores no controlados en el curso de este trabajo. Por otra parte, la semilla se sorgo T-43, muestra su más alto porcentaje de germinación 90,80,y 85 a los 100 días , con rangos de temperatura y humedad relativa de 25-27ªC y 60-65 por ciento respectivamente, esto para los momentos de recolecta 27.70 y 19.37% de humedad.

Reproducción de Esquela de la Misa de Requiem conmemorativa del 43º Aniversario del fallecimiento del Fundador del Nacionalismo Vasco, Sabino de Arana y Goiri.

Fecha: 25-11-1944 (>1970 reproducción) / Unidad de instalación: Carpeta 25 - Expediente 23-6 / Nº de pág.: 1 (mecanografiada)

Diário da Constituinte [gravação de vídeo] : [programa n. 018]

A Subcomissão de Defesa do Estado e da Sociedade da Assembleia Nacional Constituinte (ANC) recebeu a Escola Superior de Guerra que apresentou os estudos da Escola nos últimos vinte anos. O Deputado José Genoíno, em entrevista, comenta. A Subcomissão do Sistema Eleitoral e Partidos Políticos convidará os presidentes de partidos políticos e cientistas políticos para colher sugestões. O Deputado Israel Pinheiro Filho comenta. A Subcomissão dos Direitos dos Trabalhadores e Servidores Públicos receberá representantes do Departamento Intersindical de Assessoria Parlamentar, da Confederação Nacional dos Bancários, da União Sindical Independente para colher sugestões para elaboração de propostas. O Deputado Augusto Carvalho comenta. A Subcomissão de Ciência, Tecnologia e de Comunicação recebeu propostas da Federação Nacional dos Engenheiros, da Empresa Cobra de Computadores e da Sociedade Brasileira para o Progresso da Ciência sobre a reserva de mercado e o desenvolvimento tecnológico. A Subcomissão do Sistema Tributário, Orçamento e Finanças assistiu a palestra do especialista em tributação Fernando Resende, que analisou a situação tributária do país.

Day 3 at Networkshop 43 podcast transcript

Text transcription of interviews at day 3 of Networkshop 43

An evaluation of the pelagic primary productivity and potential fish yield of Kainji Lake, Nigeria

The environmental conditions of Kainji Lake from 1971/72 to date appear to have stabilized to a large extent, judging from the similarity of physico-chemical parameters investigated in this study over the period. Solar radiation (as reflected in variation in temperature) and pH have remained largely constant over the years, while conductivity (index of nutrient enrichment), though significantly higher in 1995/96, could be described as sporadic and needs further monitoring to ascertain its trend in the lake. While water transparency and dissolved oxygen were higher in 1971/72 compared to the other years, these increases cannot be said to be overwhelming. The lower transparency in 1995/96 was due to the exceptional flood of that year and may have also accounted for the poorer dissolved oxygen concentration compared to the other years due to its impact on photosynthesis. There is no evidence from this study to indicate that primary productivity has increased over the years. Consequently, the observed increase in fish yield by the KLFPP from CAS, which is corroborated by estimates from the MEI, cannot be supported on the basis of improved photosynthetic production. The phenomenal high levels of conductivity recorded during certain periods in 1995 (600 mu mhos cm super(-1)) are hitherto unknown in the lake and may indicate a trend towards nutrient enrichment. However, it is premature at this stage to conclude on its long-term impact on primary production and consequently, on fish yield. Secondly, the notion of overfishing in the 80s (Ita, 1993), may need to be further examined as low or dwindling catches could be due to a number of factors among which are the level of fishing effort, the type and efficiency of gears and the intensity of sampling. It would appear that with the intervention of KLFPP, the better management of the lake's fisheries would increase the current level of catch. It also needs to be examined how much of the clupeid fisheries, which is now known to account for a substantial proportion of the total fish yield in Kainji Lake, was included in the sampling of the 80s. (PDF contains 43 pages)