Population genetic structure and dispersal in white-lipped peccaries (Tayassu pecari) from the Brazilian Pantanal

In many mammals social organization promotes genetic structuring, which can be influenced by the dispersal pattern of the species. We analyzed the population genetic structure and dispersal of white-lipped peccaries (Tayassu pecan) from the Pantanal, Brazil. We genotyped 100 individuals at 7 microsatellite loci from 2 adjacent locations with no obvious geographic barrier between them. We found a significant but low F(ST) value, and the Bayesian analysis indicated a unique cluster. No significant differences were observed between mean assignment indices of resident males and females from both locations, and the probability of being born at the location sampled of > 30% of the individuals analyzed was lower than average. Mean relatedness between resident female, male, and opposite-sex pairs was not statistically different in both locations. These results suggest a low degree of genetic differentiation between the locations analyzed, and dispersal by both sexes (contrary to the predicted male-biased dispersal of most mammalian species).

Coalescent analysis of mtDNA indicates Pleistocene divergence among three species of howler monkey (Alouatta spp.) and population subdivision within the Atlantic Coastal Forest species, A. guariba

We have used coalescent analysis of mtDNA cytochrome b (cyt b) sequences to estimate times of divergence of three species of Alouatta-A. caraya, A. belzebul, and A. guariba-which are in close geographic proximity. A. caraya is inferred to have diverged from the A. guariba/A. belzebul clade approximately 3.83 million years ago (MYA), with the later pair diverging approximately 1.55 MYA. These dates are much more recent than previous dates based on molecular-clock methods. In addition, analyses of new sequences from the Atlantic Coastal Forest species A. guariba indicate the presence of two distinct haplogroups corresponding to northern and southern populations with both haplogroups occurring in sympatry within Sao Paulo state. The time of divergence of these two haplogroups is estimated to be 1.2 MYA and so follows quite closely after the divergence of A. guariba and A. belzebul. These more recent dates point to the importance of Pleistocene environmental events as important factors in the diversification of A. belzebul and A. guariba. We discuss the diversification of the three Alouatta species in the context of recent models of climatic change and with regard to recent molecular phylogeographic analyses of other animal groups distributed in Brazil.

Variety matters: adaptive genetic diversity and parasite load in two mouse opossums from the Brazilian Atlantic forest

The adaptive potential of a species to a changing environment and in disease defence is primarily based on genetic variation. Immune genes, such as genes of the major histocompatibility complex (MHC), may thereby be of particular importance. In marsupials, however, there is very little knowledge about natural levels and functional importance of MHC polymorphism, despite their key role in the mammalian evolution. In a previous study, we discovered remarkable differences in the MHC class II diversity between two species of mouse opossums (Gracilinanus microtarsus, Marmosops incanus) from the Brazilian Atlantic forest, which is one of the most endangered hotspots for biodiversity conservation. Since the main forces in generating MHC diversity are assumed to be pathogens, we investigated in this study gastrointestinal parasite burden and functional associations between the individual MHC constitution and parasite load. We tested two contrasting scenarios, which might explain differences in MHC diversity between species. We predicted that a species with low MHC diversity would either be under relaxed selection pressure by low parasite diversity (`Evolutionary equilibrium` scenario), or there was a recent loss in MHC diversity leading to a lack of resistance alleles and increased parasite burden (`Unbalanced situation` scenario). In both species it became apparent that the MHC class II is functionally important in defence against gastrointestinal helminths, which was shown here for the first time in marsupials. On the population level, parasite diversity did not markedly differ between the two host species. However, we did observe considerable differences in the individual parasite load (parasite prevalence and infection intensity): while M. incanus revealed low MHC DAB diversity and high parasite load, G. microtarsus showed a tenfold higher population wide MHC DAB diversity and lower parasite burden. These results support the second scenario of an unbalanced situation.

Sex ratio and morphological characteristics of Rufous Gnateaters, Conopophaga lineata (Aves, Passeriformes) in Atlantic forest fragments

Unequal sex ratios lead to the loss of genetic variability, decreasing the viability of populations in the long term. Anthropogenic activities often disturb the natural habitats and can cause alterations in sex ratio and morphological characteristics of several species. Forest fragmentation is a major conservation concern, so that understanding its effects in natural populations is essential. In this study, we evaluated the sex ratio and the morphological characteristics of Rufous Gnateaters (Conopophaga lineata (Wied, 1831)) in small and large forest fragments in Minas Gerais, Brazil. Birds (n = 89) were sexed by plumage characteristics and molecular markers. The molecular analysis showed that plumage is not a totally reliable method for sexing Rufous Gnateaters. We observed that sex ratio did not differ between large and small forest fragments, but birds in small fragments had larger wings and tarsus. Wing and tarsus changes may affect the movement ability of individuals within and among forest fragments. In conclusion, Rufous Gnateaters have been able to survive in both small and large Atlantic rain forest fragments without altering their sex ratio, but morphological changes can be prejudicial to their long term survival.

Dynamics of Dissolved Forms of Carbon and Inorganic Nitrogen in Small Watersheds of the Coastal Atlantic Forest in Southeast Brazil

Based on the fact that streamwater quality reflects landscape conditions, the objectives of this study were: to investigate nitrogen (N), carbon (C), and major ion concentrations in six streams crossing minimally disturbed Atlantic Forest areas, with similar geomorphological characteristics; to determine N and C fluxes in one of these pristine streams (Indaia); and assess the impact of human activity on the biogeochemistry of two other streams in the same region, crossing urbanized areas. The distribution pattern of carbon and inorganic nitrogen dissolved forms, as well as the major ion and biogenic gas concentrations in the streamwater, was similar in pristine streams, indicating that the C and N dynamics were determined by influence of some factors, such as climate, atmospheric deposition, geology, soil type, and land covering, which were analogous in the forested watersheds. The urban streams were significantly different from the pristine streams, showing low dissolved oxygen concentrations, high respiration rates, and high concentrations of carbon dioxide, dissolved inorganic nitrogen, dissolved inorganic carbon, and major ion. These differences were attributed to anthropogenic impact on water quality, especially domestic sewage discharge. Additionally, in the Indaia stream, it was possible to observe the importance of rainfall over temporal dynamics of dissolved carbon forms, and also, the obtained specific flux of dissolved inorganic nitrogen was relatively elevated (approximately 11 kg ha(-1) year(-1)). These results reveal the influence of human activity over the biogeochemistry of coastal streams and also indicate the importance N export of Atlantic Forest to the ocean.

Araucaria forest dynamics in relation to fire frequency in southern Brazil based on fossil and modern pollen dataf

To elucidate the relationship between forest dynamics and fire frequency pollen percentages and charcoal amounts from a 120 cm long peat core and from samples of modern pollen rain were collected along a transect. The study site in southern Brazil is characterized by a species-rich mosaic of grassland-Araucaria forest. It is of crucial importance for management strategies for conservation to understand the development and maintenance of these vegetation mosaics including their sharp forest-grassland boundaries. During the late Holocene, considerable changes occurred in the area. From Anno Domini (AD) 1360 to 1410, the area was dominated by Campos (grassland) vegetation and fire was very common. From AD 1410 to 1500, Araucaria forest expanded and fire was less frequent. From AD 1500 to 1580, Campos grassland spread and the Araucaria forest ceased its development, apparently due to the increase of fire. From AD 1580 to 1935, after a decrease in fire frequency, Araucaria forest expanded again. From AD 1935 to the present, the Araucaria forest expanded while the Campos area decreased. Fire was very rare in this period. The results indicate a strong interaction of forest expansion, forming a mosaic of Campos and Araucaria forest, and the frequency of fire during the past 600 years. A possible collapse of the indigenous population following the post-Colombian colonization in southern Brazil after about AD 1550 may have caused a great reduction of fire frequency. The introduction of cattle (probably after AD 1780) and the resulting decrease of fire frequency might be the reason for forest expansion. Fire is probably the most important factor controlling the dynamics of the forest-grassland mosaics and the formation of sharp borders between these two vegetation types. (C) 2010 Elsevier B.V. All rights reserved.

A Plant Needs Ants like a Dog Needs Fleas: Myrmelachista schumanni Ants Gall Many Tree Species to Create Housing

Hundreds of tropical plant species house ant colonies in specialized chambers called domatia. When, in 1873, Richard Spruce likened plant-ants to fleas and asserted that domatia are ant-created galls, he incited a debate that lasted almost a century. Although we now know that domatia are not galls and that most ant-plant interactions are mutualisms and not parasitisms, we revisit Spruce`s suggestion that ants can gall in light of our observations of the plant-ant Myrmelachista schumanni, which creates clearings in the Amazonian rain forest called ""supay-chakras,"" or ""devil`s gardens."" We observed swollen scars on the trunks of nonmyrmecophytic canopy trees surrounding supay-chakras, and within these swellings, we found networks of cavities inhabited by M. schumanni. Here, we summarize the evidence supporting the hypothesis that M. schumanni ants make these galls, and we hypothesize that the adaptive benefit of galling is to increase the amount of nesting space available to M. schumanni colonies.

Filogenia molecular de fungos gasteroides das ordens Phallales e Geastrales (Phallomycetidae)

Gasteroids fungi are characterized by the basidiospores maturation inside the basidioma, from which spores liberation occurs in a passive manner. These fungi were once seen as a well definite class of Basidiomycota, but nowadays they are considered an artificial assemblage, because the organisms have independent evolutionary histories forming a polyphyletic group with a vast morphological variety. Despite their diversity, studies with this group in the tropics are incipient, and the phylogenetic relationships of the species from temperate climate remain unknown. Thus, this work aimed to elucidate the phylogenetic relationships of gasteroids fungi from the Geastrales and Phallales orders, with the inclusion of tropical and temperate species, and with these analyses suggest a systematic position of species like Aseroë floriformis and Phallus roseus, as well as to verify if the lignicolous habit can indicate parental relationship in the Geastrum genus. For this, basidiomata were collected at Atlantic rain forest areas, during the rainy season, and the specimen identification followed specific literature for gasteroid fungi. The phylogenetic analyses were performed with Maximum Parsimony and Bayesian Analysis, making use of RPB2 and 28S nuclear genes and atp6 mitochondrial gene. It could be observed on the Phallales dendogram, that Aseroë floriformis did not cluster with A. rubra, and that it has an anterior divergence from all others species of the family Clathraceae used in this analysis, assuming a basal position in the clade. Phallus roseus, which once was recognized as Itajahya, has previous divergence from the group formed by Phallus species. At the Geastrales dendogram, in the group corresponding to Geastrum genus, it could be observed that species with lignicolous habitat clustered in a clade with high support values. So, the results suggest the creation of a new genus to accommodate A. floriformis, and the revalidation of Itajahya, as well as it can be affirmed that the lignicolous habitat on the Geastrum genus in fact indicates parental relationships, and that it has arised only once at the evolutionary history of the genus

Impact of Road Clearings on the Movements of Three Understory Insectivorous Bird Species in the Brazilian Atlantic Forest

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Diversidade de paronellidae (collembola, arthropleona, entomobryoidea) no nordeste brasileiro, com ênfase em áreas úmidas da caatinga

Paronellidae is among the most diverse and distinctive components of epiedaphic Collembola in tropical countries. However, only 15 species of the family were recorded in Brazil, and only two of them were record in northeast region of the country. This condiction is clearly related to low sampling efforts and lack of specialists working with the group. Due to this reality, this work aimed to study the Paronellidae fauna, under a taxonomic point of view, in six distinct environments in Northeastern Brazil (from Alagoas, Bahia, Ceará, Piauí and Paraíba states), five areas of Caatinga and one from Atlantic Rain Forest biome. Collections were made during the rainy season on each area. The specimens were analyzed under stereomicroscope and mounted in glass slides for microscopy. The specimens identified as Paronellidae had their occurrence recorded and five new species were described. An identification key to the brazilian genera of the family was also prepared. Twelve species of Paronellidae were recorded for the first time to Brazil: Campylothorax mitrai; Lepidonella. sp. nov. 1; Lepidonella sp. nov. 2, Lepidonella sp. nov. 3, Lepidonella sp. nov 4, Lepidonella sp. nov. 5; Dicranocentruga sp. Nov. 1; Dicranocentruga sp. Nov. 2; Dicranocentruga sp. Nov. 3; Paronella sp. nov.1; Serroderus sp. nov.1 and Trogolaphysa. sp. 1, where C. mitrai, Lepidonella. sp. nov 1, Dicranocentruga sp. nov 1, Dicranocentruga sp. nov 2 and Dicranocentruga sp. nov 3 were described. Serroderus and Dicranocentruga genera were recorded for the first time to Brazil. The description of Lepidonella sp. nov 1 also represents the first description of a species of the genus for the country. The data presented show a high potential species richness to Paronellidae, not only in the northeast region, but as in Brazil. In fact, with the records presented in this work, the number of recorded species of Paronellidae in the country increased by 80%. The study of this particular fauna may direct environmental conservation policies, especially in areas of Caatinga

Alterations following a fire in a forest community of Alto Rio Xingu

This study records the consequences of fire upon the soil and structure of the Amazonian Forest of Gaucha do Norte, Mato Grosso state, Brazil (13degrees12'S and 53degrees20'W). For this, the number of individuals sampled in 1 ha of the forest, during a phytosociological survey completed 2 days before the accidental fire, was compared with the survivors recorded afterwards in the reinventory of the area taken 2 days and 10 months after the fire. For the surveys, the area of 1 ha was subdivided into 50 plots of 10 m x 20 m, and all the individuals with circumference at breast height (CBH) greater than or equal to 15 cm were sampled. Chemical analysis of the 30 soil samples collected 2 days before the fire were compared with those obtained 15 days and 1 year after the fire. It was seen that, soon after the fire, there was a significant increase in the nutrient levels in the soil, an increase in the pH and a decrease in the aluminum toxicity. However, after 1 year, losses by lixiviation resulted in a nutrient reserve in the soil of less than that before the fire. The tree mortality was extremely high (23.98%), particularly amongst the younger individuals of the population (93.68% of the total of deaths in the period). There was no significant reduction in the forest richness analyzed: 60% of the species had reduced populations after the fire, but just four species were locally extinct. Results, however, demonstrated a role for fire in the selection of resistant species or those adapted to fires, since some species demonstrated a greater tolerance to the fire than others. (C) 2003 Elsevier B.V. B.V. All rights reserved.

Biologia floral e sistema de reprodução de Merostachys riedeliana (Poaceae: Bambusoideae)

Merostachys riedeliana Rupr. é uma espécie monocárpica com floração cíclica e muito freqüente em sub-bosques de fragmentos florestais do sul do estado de Minas Gerais, Brasil. Sua biologia floral e seu sistema de reprodução foram estudados e comparados com os de outros bambus. Devido ao complexo sistema de rizomas, formam touceiras vigorosas no interior da floresta, ocorrendo a interrupção na produção de novos colmos meses antes do aparecimento das primeiras inflorescências. O início da floração maciça e da morte da população ocorreu em outubro de 1998 e maio de 1999, respectivamente, com pico de floração durante a estação quente e chuvosa (dezembro e janeiro). As inflorescências espiciformes possuem, em média, 29 espiguetas. Estas são hermafroditas com três anteras poricidas e dois estigmas plumosos que se expõem durante a antese. O pólen é abundante e facilmente liberado das anteras pelo vento ou pelos visitantes. Apis mellifera L. e Trigona spinipes (F.) foram os visitantes mais freqüentes, atuando como pilhadores de pólen e, ocasionalmente, através de movimentos vibratórios, como elementos auxiliares para a dispersão do pólen. A alta pluviosidade durante a floração e a escassez de vento no sub-bosque da floresta, podem diminuir a efetividade da anemofilia. No entanto, vários caracteres morfológicos das espiguetas, queda de folhas e o hábito espacialmente agrupado, apontam para uma polinização pelo vento. Testes de polinização controlada, mostraram que M. riedeliana é autocompatível (ISI 0,99). A auto-incompatibilidade não favorece a formação de frutos em clones vegetais, ao passo que a autocompatibilidade poderia resultar em uma elevada produção de sementes. Assim, a possível ocorrência de clones de M. riedeliana nos fragmentos florestais, originados pelo crescimento vegetativo durante os intervalos reprodutivos de 30-32 anos, poderiam explicar o alto investimento na produção de espiguetas e a formação de frutos provenientes da autocompatibilidade.

Levantamento florístico de Floresta Atlântica no sul do Estado de São Paulo, Parque Estadual Intervales, Base Saibadela

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Gap size measurement: the proposal of a new field method

In the tropical Atlantic Forest, 42 canopy gaps had their areas estimated using four different field methods of measurement: Runkle, Brokaw and Green [Runkle, J.R., 1981. Gap formation in some old-growth forests of the eastern United States. Ecology 62, 1041-1051; Brokaw, N.V.L., 1982. The definition of treefall gap and its effect on measures of forest dynamics. Biotropica 14, 158-160; Green, P.T., 1996. Canopy Gaps in rain forest on Christmas Island, Indian Ocean: size distribution and methods of measurement. J. Trop. Ecol. 12, 427-434] and a new method proposed in this work. It was found that within the same gap delimitation, average gap size varied from 56.0 up to 88.3 m(3) while total sum of gap area varied from 2351.3 to 3707.9 m(3) Differences among all methods and between pairs of method proved to be statistically significant. As a consequence, gap size-class distribution was also different between methods. When one method is held as a standard, deviation on average values of gap size ranged between 11.8 and 59.7% as deviations on single gap size can reach 172.8%. Implications on forest dynamics were expressed by the forest turnover rate that was 24% faster or 15% slower depending on the method adopted for gap measurement. Based on my results and on methods' evaluation, the use of a new method is proposed here for future research involving the measure of gap size in forest ecosystems. Finally, it is concluded that forest comparisons disregarding the influence of different methods of gap measurement should be reconsidered. (c) 2005 Elsevier B.V. All rights reserved.

Use of Fruit Essential Oils to Assist Forest Regeneration by Bats

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)