Control of amylase production and growth characteristics of Aspergillus ochraceus

The growth and the extracellular amylase production by Aspergillus ochraceus were studied in a stationary culture medium. Maximum growth rate of this fungus was found after 5 days of incubation at 30° C, but maximum amylase production was obtained after 2 days. The highest amylase production were attained with lactose, maltose, xylose and starch as carbon sources. The extracellular amylase production and mycelial growth were influenced by the concentration of starch. Other carbohydrates supported growth but did not induce amylase synthesis and glucose repressed it, indicating catabolite repression in this microorganism. The presence of both mechanisms of induction and repression suggests that at least these multiple forms of regulation are present in A. ochraceus. Of the nitrogen sources tested, casaminoacids, ammonium nitrate and sodium nitrate stimulated the highest yield of amylase. Optimal amylase production was obtained at pH 5.0, but enzyme activity was found only in the 4.0-6.0 pH range. These results were probably due to the inhibitory effect of NH 4 +-N in the culture medium.

Flavonoids and arbutin from Turnera diffusa

The infusion of the aerial parts of Turnera diffusa was phytochemically examined. Chromatographic procedures led to the isolation of a new flavone glycoside, five known flavonoids and p-arbutin. Structures were determined by 1D- and 2D NMR experiments, as well as ES-MS and UV spectra.

Library professionals' education in the Mercosur countries

This paper deals with library professionals education in Mercosur - the Common Market of South America - established on 29 March, 1991 to expand the national markets of Argentina, Brazil, Paraguay and Uruguay, and promote free circulation of goods, services and production agents in that region. The paper presents, through a descriptive study, the undergraduate and graduate courses in Library Science, how many and what schools there are, and what programs are developed. It ends by identifying the directions in which they are moving and the challenges they are now facing.

DAHP synthase from Mycobacterium tuberculosis H37Rv: Cloning, expression, and purification of functional enzyme

Tuberculosis (TB), caused by Mycobacterium tuberculosis, remains the leading cause of mortality due to a bacterial pathogen. According to the 2004 Global TB Control Report of the World Health Organization, there are 300,000 new cases per year of multi-drug resistant strains (MDR-TB), defined as resistant to isoniazid and rifampicin, and 79% of MDR-TB cases are now super strains, resistant to at least three of the four main drugs used to treat TB. Thus there is a need for the development of effective new agents to treat TB. The shikimate pathway is an attractive target for the development of antimycobacterial agents because it has been shown to be essential for the viability of M. tuberculosis, but absent from mammals. The M. tuberculosis aroG-encoded 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase (mtDAHPS) catalyzes the first committed step in this pathway. Here we describe the PCR amplification, cloning, and sequencing of aroG structural gene from M. tuberculosis H37Rv. The expression of recombinant mtDAHPS protein in the soluble form was obtained in Escherichia coli Rosetta-gami (DE3) host cells without IPTG induction. An approximately threefold purification protocol yielded homogeneous enzyme with a specific activity value of 0.47 U mg-1 under the experimental conditions used. Gel filtration chromatography results demonstrate that recombinant mtDAHPS is a pentamer in solution. The availability of homogeneous mtDAHPS will allow structural and kinetics studies to be performed aiming at antitubercular agents development. © 2004 Elsevier Inc. All rights reserved.

Mineralización de la paja de caña de azúcar en suelo adicionado con viñaza (suproducto de la industria del alcohol de caña de azúcar) y fertilizante nitrogenado

Cellulose is the most abundant vegetable organic compound, being derived mainly from plant residues. The decomposition of sugar-cane (Saccharum officinarum L.) straw was studied in a period up to 90 days, through variables related to the carbon cycle, such as respiratory activity and CM-cellulase (CM, cellulose microcrystalline) and CMC-cellulase (CMC, carboxymethylcellulose) activities. The treatments consisted of 0, 0.5 and 1.0% of straw, in the presence and absence of vinasse (a sugar-cane alcohol industry byproduct) and nitrogen fertilizer. The respiratory and cellulase activities increased up to the 14th day of incubation and later decreased. The respiratory activity was 1.9 and 2.3 fold larger (P < 0.05) in the soil with 0.5 and 1.0% of straw added, respectively, in relation to the control. CM- and CMC- cellulase activities also increased from 1.8 to 2.9 and from 2.3 to 2.7 fold, respectively. The vinasse addition enhanced CO 2 production and CM-cellulase activity, however, no significant effect was observed on CMC-cellulase activity. The addition of N reduced both respiratory and cellulase activities. The decomposition of the sugar-cane straw may enhance soil nutrient cycling increasing agricultural production. © 2006 Instituto de Investigaciones Agropecuarias, INIA.

Chorismate synthase: An attractive target for drug development against orphan diseases

The increase in incidence of infectious diseases worldwide, particularly in developing countries, is worrying. Each year, 14 million people are killed by infectious diseases, mainly HIV/AIDS, respiratory infections, malaria and tuberculosis. Despite the great burden in the poor countries, drug discovery to treat tropical diseases has come to a standstill. There is no interest by the pharmaceutical industry in drug development against the major diseases of the poor countries, since the financial return cannot be guaranteed. This has created an urgent need for new therapeutics to neglected diseases. A possible approach has been the exploitation of the inhibition of unique targets, vital to the pathogen such as the shikimate pathway enzymes, which are present in bacteria, fungi and apicomplexan parasites but are absent in mammals. The chorismate synthase (CS) catalyses the seventh step in this pathway, the conversion of 5-enolpyruvylshikimate-3-phosphate to chorismate. The strict requirement for a reduced flavin mononucleotide and the anti 1,4 elimination are both unusual aspects which make CS reaction unique among flavin-dependent enzymes, representing an important target for the chemotherapeutic agents development. In this review we present the main biochemical features of CS from bacterial and fungal sources and their difference from the apicomplexan CS. The CS mechanisms proposed are discussed and compared with structural data. The CS structures of some organisms are compared and their distinct features analyzed. Some known CS inhibitors are presented and the main characteristics are discussed. The structural and kinetics data reviewed here can be useful for the design of inhibitors. © 2007 Bentham Science Publishers Ltd.

The Mycobacterium tuberculosis Rv2540c DNA sequence encodes a bifunctional chorismate synthase

Background. The emergence of multi- and extensively-drug resistant Mycobacterium tuberculosis strains has created an urgent need for new agents to treat tuberculosis (TB). The enzymes of shikimate pathway are attractive targets to the development of antitubercular agents because it is essential for M. tuberculosis and is absent from humans. Chorismate synthase (CS) is the seventh enzyme of this route and catalyzes the NADH- and FMN-dependent synthesis of chorismate, a precursor of aromatic amino acids, naphthoquinones, menaquinones, and mycobactins. Although the M. tuberculosis Rv2540c (aroF) sequence has been annotated to encode a chorismate synthase, there has been no report on its correct assignment and functional characterization of its protein product. Results. In the present work, we describe DNA amplification of aroF-encoded CS from M. tuberculosis (MtCS), molecular cloning, protein expression, and purification to homogeneity. N-terminal amino acid sequencing, mass spectrometry and gel filtration chromatography were employed to determine identity, subunit molecular weight and oligomeric state in solution of homogeneous recombinant MtCS. The bifunctionality of MtCS was determined by measurements of both chorismate synthase and NADH:FMN oxidoreductase activities. The flavin reductase activity was characterized, showing the existence of a complex between FMN ox and MtCS. FMNox and NADH equilibrium binding was measured. Primary deuterium, solvent and multiple kinetic isotope effects are described and suggest distinct steps for hydride and proton transfers, with the former being more rate-limiting. Conclusion. This is the first report showing that a bacterial CS is bifunctional. Primary deuterium kinetic isotope effects show that C4-proS hydrogen is being transferred during the reduction of FMNox by NADH and that hydride transfer contributes significantly to the rate-limiting step of FMN reduction reaction. Solvent kinetic isotope effects and proton inventory results indicate that proton transfer from solvent partially limits the rate of FMN reduction and that a single proton transfer gives rise to the observed solvent isotope effect. Multiple isotope effects suggest a stepwise mechanism for the reduction of FMNox. The results on enzyme kinetics described here provide evidence for the mode of action of MtCS and should thus pave the way for the rational design of antitubercular agents. © 2008 Ely et al; licensee BioMed Central Ltd.

Solubilization of iron phosphate by free or immobilized spores and pellets of Aspergillus niger

The production of pellets by Aspergillus niger and the FePO 4 (FeP) solubilization through the use of free or immobilized spores and pellets were studied. The media Sabouraud, MS-FeP, MS-K 2HPO 4, Czapek and Malt were used for pellets yield. Enhanced growth and pellets production were found in the Sabouraud and MS-FeP than those produced by the other media. Pellets produced in Sabouraud were larger in size and formed well-defined spheres than those produced in MS-FeP. Pellets amounts varying from 2 to 8 mg mL, -1 were inoculated in the MS-FeP medium. The greatest quantity of solubilized FeP was found when 6 mg of pellets mL, -1 were used. While the free spores were the worst form used for FeP solubilization in culture medium, free pellets allowed for the production of the greatest quantities of soluble phosphate, even after repeated use of the pellets. In the soil, pellets solubilized similar quantities of FeP compared to the immobilized A. niger spores and can be used with advantage since they are easily produced. © 2010 Academic Journals Inc.

Pre-harvest sugarcane burning: Determination of emission factors through laboratory measurements

Sugarcane is an important crop for the Brazilian economy and roughly 50% of its production is used to produce ethanol. However, the common practice of pre-harvest burning of sugarcane straw emits particulate material, greenhouse gases, and tropospheric ozone precursors to the atmosphere. Even with policies to eliminate the practice of pre-harvest sugarcane burning in the near future, there is still significant environmental damage. Thus, the generation of reliable inventories of emissions due to this activity is crucial in order to assess their environmental impact. Nevertheless, the official Brazilian emissions inventory does not presently include the contribution from pre-harvest sugarcane burning. In this context, this work aims to determine sugarcane straw burning emission factors for some trace gases and particulate material smaller than 2.5μm in the laboratory. Excess mixing ratios for CO2, CO, NOX, UHC (unburned hydrocarbons), and PM2.5 were measured, allowing the estimation of their respective emission factors. Average estimated values for emission factors (g kg-1 of burned dry biomass) were 1,303 ± 218 for CO2, 65 ± 14 for CO, 1.5 ± 0.4 for NOX, 16 ± 6 for UHC, and 2.6 ± 1.6 for PM2.5. These emission factors can be used to generate more realistic emission inventories and therefore improve the results of air quality models. © 2012 by the authors; licensee MDPI, Basel, Switzerland.

Conhecimento tecnológico e inovação no Brasil: Um estudo patentométrico na universidade estadual paulista

The patent recordings of the Universidade Estadual Paulista (UNESP) since its first recording in 1980 to December 2010 are analysed, in order to promote their visibility, and analyze their authors, most productive areas and most common themes. As research procedure, we verified the relation of all patents deposited, following different types: patent recordings of invention, utility models, brands and industrial drawings, all of which were obtained from the Unesp Innovation Agency. Finally, the scientific colaboration network among the researchers was drawn using PAJEK. The most productive authors are grouped in the Araraqua Chemistry Institute and the engeneering area.

Análise bibliométrica da revista Scire: Um estudo de colaboração científica institucional

The aim of this research is to make a bibliometric analysis of the journal Scire: Representación y Organización del Conocimiento, edited in Spain, in order to evidence the most productive institutions and countries, as well as to build a cooperation network and calculate the density indicators, centrality degree and betweenness. The 292 articles of the period 1996 to 2010 were analyzed. It was found out that, of the institutions participating in the articles, 25 institutions have been clearly the most productive. Almost all of them are Spanish, except four Brazilian ones and three more from three different countries. The institutional network showed a low density, but several cooperative sub-networks were identified, which suggest the existence of an international dialogue among researchers on the discipline.

Dentistry scientometric analysis: A comparative study between Brazil and other most productive countries in the area

This research aims at performing a comparative study between the Brazilian scientific production in Dentistry, from 2000 to 2009 and countries that contribute with at least 2 % of the world's scientific production indexed in the Scopus database. More specifically, we intend to assess the annual Brazilian scientific production by comparing it to the other countries', analyze the Brazilian and other countries' publications in journals with higher impact factors, as well as to highlight the scientific production from these countries and its international visibility, measured by its total and by its average of citations and normalized citation index per year, by comparing the countries, and to compare the index h of such countries. As work procedure, the SCImago Journal and Country Rank was used as source, identifying the group of producing countries in the Dentistry area from 1996 to 2009. From a total of 136 countries, 13 were highlighted as the most productive, each one of them accounting for at least 2 % the worldwide scientific production in the area. The following indicators were raised for each country: number of produced documents, total of citations, self-citations, average of citations per document and index h. We verified that Brazil is the only country in Latin America that is pictured among the most productive ones in the Dentistry area. We observed that Brazil presents a growing visibility and impact in the international scenery, what suggests that its production is constantly consolidating, with Brazilian scientific recognition in the main vehicles of dissemination in the area. © 2012 Akadémiai Kiadó, Budapest, Hungary.

Decomposition dynamics of soybean residues in two soils of different fertility

The study objective was to evaluate the influence of the addition of soybeans residues on the chemical properties of Eutrudox and Hapludox soils. Soybean leaves and stems were incubated for 0-200 days. The statistical model used was a 5×4 factorial (plantxincubation period) with three replications. Soils without addition of plants were used as controls. Total Organic Carbon (TOC), Soluble Carbon (SC), Total Carbohydrates (TC), Humic Acid (HA), Fulvic Acid (FA) and Humification Rate (HR) were determined. Higher values of chemical attributes (TOC, SC and TC) were found in the Eutrudox soil than in the Hapludox soil and these values increased significantly (p<0.05) after 50 days of incubation in relation to the initial period. The TOC, SC and TC increased in soils amended with soybean plants when compared to controls without plants. HA and FA contents and HR were not affected by the addition of soybean residues. Maximum HA contents were found after 100 days and maximum FA contents and HR were found after 200 days incubation in both soils. It can be concluded that the addition of soybean residues increased the soil chemical properties when compared to the controls. © 2013 Academic Journals Inc.

Perdas de sedimentos por erosão de uma área citrícola da região de Bebedouro, SP

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Riqueza de espécies e uso de hábitats por mamíferos terrestres de médio e grande porte no alto rio Marmelos, Manicoré (AM)

A ausência de um consenso sobre as prioridades de conservação de mamíferos e a escassez de inventários completos dificultam ações eficazes de conservação dessas espécies na Amazônia. Dentro desse contexto, a região do rio Marmelos no município ao sul do Amazonas, ainda pouco conhecida e ameaçada por exploração madereira e expansão agropecuária, é prioritária para a realização de inventários. Dessa forma foi realizado no período de 26 de julho a 10 de setembro de 2004 um estudo objetivando identificar a riqueza e uso de habitats por mamíferos terrestres de médio e grande porte na região do alto rio Marmelos, ao sul do estado do Amazonas. Para tanto, foram empregados métodos indiretos (registro de pegadas) e diretos (avistamento) em um esforço amostrai que totalizou 228 km percorridos em transecções lineares. Nas quatro formações vegetais amostradas (mata aberta, mata densa, savana parque e campo cerrado) foi registrado um total de 50 espécies, sendo 36 através de observações diretas ou de pegadas. Destas espécies, 12 são listadas pela IUCN. O método de pegadas registrou o maior número de espécies e de forma mais rápida. A maior fração (45%) das espécies registradas apresentou um comportamento generalista, utilizando tanto os habitats florestais como as formações abertas, corroborando a tendência descrita na literatura para áreas com formações vegetais similares. A mata aberta foi o ambiente que abrigou o maior número de espécies, além de ser o habitat mais utilizado.