Seawater carbonate chemistry and biological processes during experiments with phytoplankton Emiliania huxleyi (CS369), 2009

Increasing atmospheric CO2 concentration affects calcification in most planktonic calcifiers. Both reduced or stimulated calcification under high CO2 have been reported in the widespread coccolithophore Emiliania huxleyi. This might affect the response of cells to photosynthetically active radiation (PAR; 400-700 nm) and ultraviolet radiation (UVR; 280-400 nm) by altering the thickness of the coccolith layer. Here we show that in the absence of UVR, the calcification rates in E. huxleyi decrease under lowered pH levels (pHNBS of 7.9 and 7.6; pCO2 of 81 and 178 Pa or 804 and 1759 ppmv, respectively) leading to thinned coccolith layers, whereas photosynthetic carbon fixation was slightly enhanced at pH 7.9 but remained unaffected at pH 7.6. Exposure to UVR (UV-A 19.5 W m**-2, UV-B 0.67 W m**-2) in addition to PAR (88.5 W m**-2), however, results in significant inhibition of both photosynthesis and calcification, and these rates are further inhibited with increasing acidification. The combined effects of UVR and seawater acidification resulted in the inhibition of calcification rates by 96% and 99% and that of photosynthesis by 6% and 15%, at pH 7.9 and 7.6, respectively. This differential inhibition of calcification and photosynthesis leads to significant reduction of the ratio of calcification to photosynthesis. Seawater acidification enhanced the transmission of harmful UVR by about 26% through a reduction of the coccolith layer of 31%. Our data indicate that the effect of a high-CO2 and low-pH ocean on E. huxleyi (because of reduced calcification associated with changes in the carbonate system) enhances the detrimental effects of UVR on the main pelagic calcifier.

Colimitation of the unicellular photosynthetic diazotroph Crocosphaera watsonii by phosphorus, light, and carbon dioxide

We describe interactive effects of total phosphorus (total P = 0.1-4.0 µmol/L; added as H2NaPO4), irradiance (40 and 150 µmol quanta/m**2/s), and the partial pressure of carbon dioxide (P-CO2; 19 and 81 Pa, i.e., 190 and 800 ppm) on growth and CO2- and dinitrogen (N-2)-fixation rates of the unicellular N-2-fixing cyanobacterium Crocosphaera watsonii (WH0003) isolated from the Pacific Ocean near Hawaii. In semicontinuous cultures of C. watsonii, elevated P-CO2 positively affected growth and CO2- and N-2-fixation rates under high light. Under low light, elevated P-CO2 positively affected growth rates at all concentrations of P, but CO2- and N-2-fixation rates were affected by elevated P-CO2 only when P was low. In both high-light and low-light cultures, the total P requirements for growth and CO2- and N-2-fixation declined as P-CO2 increased. The minimum concentration (C-min) of total P and half-saturation constant (K-1/2) for growth and CO2- and N-2-fixation rates with respect to total P were reduced by 0.05 µmol/L as a function of elevated P-CO2. We speculate that low P requirements under high P-CO2 resulted from a lower energy demand associated with carbon-concentrating mechanisms in comparison with low-P-CO2 cultures. There was also a 0.10 µmol/L increase in C-min and K-1/2 for growth and N-2 fixation with respect to total P as a function of increasing light regardless of P-CO2 concentration. We speculate that cellular P concentrations are responsible for this shift through biodilution of cellular P and possibly cellular P uptake systems as a function of increasing light. Changing concentrations of P, CO2, and light have both positive and negative interactive effects on growth and CO2-, and N-2-fixation rates of unicellular oxygenic diazotrophs like C. watsonii.

Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage

DNA damage generated by oxidant byproducts of cellular metabolism has been proposed as a key factor in cancer and aging. Oxygen free radicals cause predominantly base damage in DNA, and the most frequent mutagenic base lesion is 7,8-dihydro-8-oxoguanine (8-oxoG). This altered base can pair with A as well as C residues, leading to a greatly increased frequency of spontaneous G·C→T·A transversion mutations in repair-deficient bacterial and yeast cells. Eukaryotic cells use a specific DNA glycosylase, the product of the OGG1 gene, to excise 8-oxoG from DNA. To assess the role of the mammalian enzyme in repair of DNA damage and prevention of carcinogenesis, we have generated homozygous ogg1−/− null mice. These animals are viable but accumulate abnormal levels of 8-oxoG in their genomes. Despite this increase in potentially miscoding DNA lesions, OGG1-deficient mice exhibit only a moderately, but significantly, elevated spontaneous mutation rate in nonproliferative tissues, do not develop malignancies, and show no marked pathological changes. Extracts of ogg1 null mouse tissues cannot excise the damaged base, but there is significant slow removal in vivo from proliferating cells. These findings suggest that in the absence of the DNA glycosylase, and in apparent contrast to bacterial and yeast cells, an alternative repair pathway functions to minimize the effects of an increased load of 8-oxoG in the genome and maintain a low endogenous mutation frequency.

Psr1, a nuclear localized protein that regulates phosphorus metabolism in Chlamydomonas

Understanding the ways in which phosphorus metabolism is regulated in photosynthetic eukaryotes is critical for optimizing crop productivity and managing aquatic ecosystems in which phosphorus can be a major source of pollution. Here we describe a gene encoding a regulator of phosphorus metabolism, designated Psr1 (phosphorus starvation response), from a photosynthetic eukaryote. The Psr1 protein is critical for acclimation of the unicellular green alga Chlamydomonas reinhardtii to phosphorus starvation. The N-terminal half of Psr1 contains a region similar to myb DNA-binding domains and the C-terminal half possesses glutamine-rich sequences characteristic of transcriptional activators. The level of Psr1 increases at least 10-fold upon phosphate starvation, and immunocytochemical studies demonstrate that this protein is nuclear-localized under both nutrient-replete and phosphorus-starvation conditions. Finally, Psr1 and angiosperm proteins have domains that are similar, suggesting a possible role for Psr1 homologs in the control of phosphorus metabolism in vascular plants. With the identification of regulators such as Psr1 it may become possible to engineer photosynthetic organisms for more efficient utilization of phosphorus and to establish better practices for the management of agricultural lands and natural ecosystems.

Inhibitory sites in enzymes: Zinc removal and reactivation by thionein

Thionein (T) has not been isolated previously from biological material. However, it is generated transiently in situ by removal of zinc from metallothionein under oxidoreductive conditions, particularly in the presence of selenium compounds. T very rapidly activates a group of enzymes in which zinc is bound at an inhibitory site. The reaction is selective, as is apparent from the fact that T does not remove zinc from the catalytic sites of zinc metalloenzymes. T instantaneously reverses the zinc inhibition with a stoichiometry commensurate with its known capacity to bind seven zinc atoms in the form of clusters in metallothionein. The zinc inhibition is much more pronounced than was previously reported, with dissociation constants in the low nanomolar range. Thus, T is an effective, endogenous chelating agent, suggesting the existence of a hitherto unknown and unrecognized biological regulatory system. T removes the metal from an inhibitory zinc-specific enzymatic site with a resultant marked increase of activity. The potential significance of this system is supported by the demonstration of its operations in enzymes involved in glycolysis and signal transduction.

Substratal idiothetic navigation of rats is impaired by removal or devaluation of extramaze and intramaze cues

The spatial orientation of vertebrates is implemented by two complementary mechanisms: allothesis, processing the information about spatial relationships between the animal and perceptible landmarks, and idiothesis, processing the substratal and inertial information produced by the animal's active or passive movement through the environment. Both systems allow the animal to compute its position with respect to perceptible landmarks and to the already traversed portion of the path. In the present study, we examined the properties of substratal idiothesis deprived of relevant exteroceptive information. Rats searching for food pellets in an arena formed by a movable inner disk and a peripheral immobile belt were trained in darkness to avoid a 60° sector; rats that entered this sector received a mild foot shock. The punished sector was defined in the substratal idiothetic frame, and the rats had to determine the location of the shock sector with the use of substratal idiothesis only, because all putative intramaze cues were made irrelevant by angular displacements of the disk relative to the belt. Striking impairment of place avoidance by this “shuffling procedure” indicates that effective substratal idiothesis must be updated by exteroceptive intramaze cues.

Estratégia operacional de sistema formado por reator não compartimentado com setores com aeração/sem aeração precedido por reator anaeróbio

A opção por sistemas biológicos prevalece para o tratamento do esgoto sanitário. Nas décadas recentes, sistemas que possuem regiões e/ou zonas anaeróbia, anóxica e aeróbia têm-se mostrado como alternativas atraentes para remoção simultânea de matéria orgânica, nitrogênio e fósforo. No entanto, os aspectos operacionais ainda merecem ser objeto de estudo para alcançar desempenho otimizado. Nesse cenário, com intuito de comparar alternativas para a operação das unidades de tratamento de esgoto, o presente trabalho propôs-se a estudar estratégias operacionais associadas ao monitoramento, em tempo real, sem adição de fonte externa de carbono, para um reator aerado não compartimentado com crescimento suspenso e fluxo contínuo precedido de reator anaeróbio. O sistema experimental, em escala de bancada, era constituído de um reator anaeróbio, com volume útil de 43,54 L, e reator aerado, com volume útil de 68,07 L; sendo que este era formado por sete setores, em série, sem separação física. O estudo foi dividido em duas etapas: I - estudo da variação dos volumes da região aerada e da não aerada; II - estudo da aeração intermitente com ciclo de aeração/agitação pré-fixado e controlado em tempo real por sistema informatizado. Em todas as Etapas do estudo ocorreu elevada remoção de DBO e conversão de NTK para nitrato, contudo não se conseguiu obter desnitrificação em nível desejado. O uso de reatores com setores sequenciais sem divisão física (Etapa I) dificultou a obtenção de regiões distintas predominantemente anóxica e aeróbia, comprometendo a remoção de nitrogênio (principalmente a desnitrificação). A maior eficiência média de remoção de nitrogênio alcançada no reator aerado foi de 35,6% (Etapa II), quando o reator era operado com aeração intermitente sendo o ciclo de aeração/agitação controlado em tempo real. A estratégia de operação com aeração intermitente, estudada na Etapa II, favoreceu a remoção de nitrogênio. A aeração intermitente demonstrou ser uma opção promissora comparada à aeração contínua em setores específicos do reator. O controle automatizado e informatizado em tempo real dos ciclos de aeração/agitação pode ser aplicado no aperfeiçoamento da operação dos sistemas de tratamento de esgoto sanitário.

Biological Atlas of the Arctic Seas 2000: Physical oceanography, hydrochemistry, meteorology, and plankton of the Barents and Kara Seas

Presented are physical and biological data for the region extending from the Barents Sea to the Kara Sea during 158 scientific cruises for the period 1913-1999. Maps with the temporal distribution of physical and biological variables of the Barents and Kara Seas are presented, with proposed quality control criteria for phytoplankton and zooplankton data. Changes in the plankton community structure between the 1930s, 1950s, and 1990s are discussed. Multiple tables of Arctic Seas phytoplankton and zooplankton species are presented, containing ecological and geographic characteristics for each species, and images of live cells for the dominant phytoplankton species.

Geochemistry of Neogene sediments of ODP Hole 115-711A

Pelagic sedimentation in the northwest Indian Ocean has been studied using sediments from Hole 711A (the section from 0 to 70.5 mbsf, 0-22 Ma), a deep site (4428 m) drilled during Ocean Drilling Program Leg 115. The clay fraction of the sediments represents poorly developed pelagic deposits with considerably lower contents of Mn, Ba, Cu, Ni, Cr, and Zn than is typical for well-oxidized pelagic sediments formed far from the continents (e.g., in the central Indian or Pacific oceans). Geochemical provenance models, representing conservative mixing models with terrigenous, exhalative-volcanic, and biogenous matter as the only inputs, explain most of the compositional variations in the sediments. The models show that terrigenous matter accounts for about 96%-100% of all SiO2, Al2O3, TiO2, and Zr; about 73%-85% of all Fe2O3, V, and Ni; and about 40%-60% of the Cu and Zn abundances. Exhalative-volcanic matter delivers a large fra tion of Mn (78%-85%), some Fe (15%-219/o), and possibly some Cu (38%-51%). Biogenous deposition is generally of restricted significance; at most 6%-35% of all Cu and Zn may derive from biogenic matter. The exhalative-volcanic matter is slightly more abundant in the oldest deposits, reflecting a plate tectonic drift away from the volcanic Carlsberg Ridge. The Al/Ti ratio reveals that silicic crustal matter plays a somewhat larger role in the upper and lower part of the section studied, whereas the basaltic input is slightly higher in the intermediate levels (age 5-15 m.y.). The sediment abundances of Ba generally exceed those predicted by the models, an anomalous behavior also observed in equatorial Pacific sediments. This is possibly caused by poor knowledge of the input components. Several changes in accumulation rates seem to correlate with climatic changes (onset of monsoon-driven upwellings and sea-level regressions of about 50-100 m at 10, 15-16, and 20-21 Ma). A number of constituents show higher accumulation rates at or shortly after these regressions, suggesting an accelerated removal of fines from shallow oceanic areas. Furthermore, the SiO2/Al2O3 ratio shows a small increase in sediments younger than 10 Ma, implying an increase in biological productivity, particularly after the onset of monsoon-driven upwelling in the northwest Indian Ocean. This trend is paralleled by a general increase in the accumulation rates of Ba and CaCO3. However, these accumulation rates are generally significantly lower than under the biological high-productivity zone in the equatorial Pacific. The onset of these upwelling systems about 10 Ma is probably related to the closing of the gap between India and the main Asiatic continent, preventing free circulation around the Indian subcontinent.

Precipitation and inactivation of phosphorus as a lake restoration technique /

Mode of access: Internet.

High rate nutrient removal for combined sewer overflows : bench scale and demonstration scale studies /

Mode of access: Internet.

Surgery for Removal of Rectum (1of 4)

India Ink on Line Kote; Dr. Thomas Dent, University of Michigan Department of Surgery

Surgery for Removal of Rectum (2 of 4)

India Ink on Line Kote; Dr. Thomas Dent, University of Michigan Department of Surgery

Surgery for Removal of Rectum (3 of 4)

India Ink on Line Kote; Dr. Thomas Dent, University of Michigan Department of Surgery