Pleistocene and upper Pliocene sapropels in the Tyrrhenian Sea, Mediterranean Sea

A most significant finding of the ODP Leg 107 drilling campaign was the recovery of at least 56 distinct sapropel intervals in upper Pliocene to Pleistocene sediments of six sites drilled in the Tyrrhenian Sea. Except for 3 repots of disturbed organic-rich sediments - recovered in Core 201 of the Swedish Deep-Sea Expedition, in Core 2R-1,107 cm of Site 373 (Leg 13 DSDP) and at Site 373, Core 1-2,O-5 cm of DSDP Leg 42A - sapropels had previously only been described from the eastern Mediterranean and the Black Sea. Scientific deep-sea drilling in the Tyrrhenian Sea during DSDP Legs 13 and 42A apparently missed most of these deposits due to spot coring and rotary drilling techniques; high sedimentation rates may have precluded recovery by conventional gravity coring devices. The recovery of multiple layers of sapropels and sapropelic sediments in the Tyrrhenian Sea demonstrates that oceanographic conditions conducive to sapropel formation were not confined to the Black Sea and eastern Mediterranean, but occurred sporadically and possibly simultaneously in the entire Mediterranean during the Pliocene and Pleistocene. In the light of this finding, previous models of sapropel genesis may need reconsideration. In this paper, we present some initial data on the Tyrrhenian sapropels and suggest some implications of their massive occurrence in the western Mediterranean realm. We end by outlining possible causes for deposition of sapropels in an attempt to revive the interest in sapropels and their paleoceanographic significance.

High resolution isotope and Mg/Ca record of sediment core GeoB12615-4

The importance of intermediate water masses in climate change and ocean circulation has been emphasized recently. In particular, Southern Ocean Intermediate Waters (SOIW), such as Antarctic Intermediate Water and Subantarctic Mode Water, are thought to have acted as active interhemispheric transmitter of climate anomalies. Here we reconstruct changes in SOIW signature and spatial and temporal evolution based on a 40 kyr time series of oxygen and carbon isotopes as well as planktic Mg/Ca based thermometry from Site GeoB12615-4 in the western Indian Ocean. Our data suggest that SOIW transmitted Antarctic temperature trends to the equatorial Indian Ocean via the "oceanic tunnel" mechanism. Moreover, our results reveal that deglacial SOIW carried a signature of aged Southern Ocean deep water. We find no evidence of increased formation of intermediate waters during the deglaciation.

Radiocarbon dataing, stable oxygen isotopes, and Mg/Ca ratios in surface sediment samples of the tropical eastern Indian Ocean

Shell chemistry of planktic foraminifera and the alkenone unsaturation index in 69 surface sediment samples in the tropical eastern Indian Ocean off West and South Indonesia were studied. Results were compared to modern hydrographic data in order to assess how modern environmental conditions are preserved in sedimentary record, and to determine the best possible proxies to reconstruct seasonality, thermal gradient and upper water column characteristics in this part of the world ocean. Our results imply that alkenone-derived temperatures record annual mean temperatures in the study area. However, this finding might be an artifact due to the temperature limitation of this proxy above 28°C. Combined study of shell stable oxygen isotope and Mg/Ca ratio of planktic foraminifera suggests that Globigerinoides ruber sensu stricto (s.s.), G. ruber sensu lato (s.l.), and G. sacculifer calcify within the mixed-layer between 20 m and 50 m, whereas Globigerina bulloides records mixed-layer conditions at ~50 m depth during boreal summer. Mean calcifications of Pulleniatina obliquiloculata, Neogloboquadrina dutertrei, and Globorotalia tumida occur at the top of the thermocline during boreal summer, at ~75 m, 75-100 m, and 100 m, respectively. Shell Mg/Ca ratios of all species show a significant correlation with temperature at their apparent calcification depths and validate the application of previously published temperature calibrations, except for G. tumida that requires a regional Mg/Ca-temperature calibration (Mg/Ca = 0.41 exp (0.068*T)). We show that the difference in Mg/Ca-temperatures of the mixed-layer species and the thermocline species, particularly between G. ruber s.s. (or s.l.) and P. obliquiloculata, can be applied to track changes in the upper water column stratification. Our results provide critical tools for reconstructing past changes in the hydrography of the study area and their relation to monsoon, El Niño-Southern Oscillation, and the Indian Ocean Dipole Mode.

Hydroclimate records and radiocarbon dating of sediment cores SO189/2 _39KL, SO189/2 _119KL, and SO189/2 _144KL from the eastern tropical Indian Ocean

The response of the tropical climate in the Indian Ocean realm to abrupt climate change events in the North Atlantic Ocean is contentious. Repositioning of the intertropical convergence zone is thought to have been responsible for changes in tropical hydroclimate during North Atlantic cold spells1, 2, 3, 4, 5, but the dearth of high-resolution records outside the monsoon realm in the Indian Ocean precludes a full understanding of this remote relationship and its underlying mechanisms. Here we show that slowdowns of the Atlantic meridional overturning circulation during Heinrich stadials and the Younger Dryas stadial affected the tropical Indian Ocean hydroclimate through changes to the Hadley circulation including a southward shift in the rising branch (the intertropical convergence zone) and an overall weakening over the southern Indian Ocean. Our results are based on new, high-resolution sea surface temperature and seawater oxygen isotope records of well-dated sedimentary archives from the tropical eastern Indian Ocean for the past 45,000 years, combined with climate model simulations of Atlantic circulation slowdown under Marine Isotope Stages 2 and 3 boundary conditions. Similar conditions in the east and west of the basin rule out a zonal dipole structure as the dominant forcing of the tropical Indian Ocean hydroclimate of millennial-scale events. Results from our simulations and proxy data suggest dry conditions in the northern Indian Ocean realm and wet and warm conditions in the southern realm during North Atlantic cold spells.

Planktonic foraminifera stratigraphy and datum events of ODP Leg 198 sites

During Leg 198 of the Ocean Drilling Program (ODP), Paleogene sediments were recovered form 10 holes at four sites along a bathymetric transect from the Southern High of Shatsky Rise. In terms of age, the Paleogene successions span from the Cretaceous/Paleocene boundary to the early Oligocene. Sediments are mainly composed of tan nannofossil ooze with scattered darker layers richer in clay. This data report concerns planktonic foraminiferal biostratigraphy from three holes, specifically Hole 1209A (water depth = 2387 m), Hole 1210A (water depth = 2573 m), and Hole 1211A (water depth = 2907 m). The thickness of Paleogene sediments is 105.90 m in Hole 1209A, 95.05 m in Hole 1210A, and 56.11 m in the deepest Hole 1211A. Preliminary investigations conducted on board revealed that at Site 1209 the succession was mostly complete, whereas the succession was more condensed at Site 1211.

The nitrate-afterripening crosstalk is involved in the testa rupture of sisymbryum offinales seed

The loss of seed dormancy can occur by exposing the seed at low moisture storage conditions (afterripening; AR). Since a positive GA:ABA ratio play a key role in the reactivation of germination of non-dormant seeds, it seems obvious that a remarkable effect of AR is the decreasing of both ABA levels and sensitivity, as well as the increment of GA synthesis and sensitivity. ABA levels are regulated by control both of its biosynthesis thorough the 9-cis-epoxycarotenoid dioxygenase (NCED) encoding genes and its catabolism mediated mainly by ABA-8¿-hydroxylases (CYP707A). On the other hand, the last steps of the GA biosynthesis pathway should be involved to control its levels. Namely, GA20ox and GA3ox catalyzing the biosynthesis of active GA and GA2ox which catalyzes the GA inactivation. The presence of nitrate accelerates the sensu stricto germination of non-AR S. officinale seeds. Here, we demonstrate that in AR seeds nitrate also alters the expression pattern of key genes involved in ABA and GA metabolism and signalling (i.e. SoNCED6, SoNCED9, SoCYP707A2, SoABI5, SoGA3ox2, SoGA20ox6, SoGA2ox6 and SoRGL2). These results suggest that the nitrate signalling is also operative during imbibition of AR S. officinale seeds.

Mannans and endo-beta-mannanases (MAN) in Brachypodium distachyon: expression profiling and possible role of the BdMAN genes during coleorhiza-limited seed germination

Immunolocalization of mannans in the seeds of Brachypodium distachyon reveals the presence of these polysaccharides in the root embryo and in the coleorhiza in the early stages of germination (12h), decreasing thereafter to the point of being hardly detected at 27h. Concurrently, the activity of endo-β-mannanases (MANs; EC 3.2.1.78) that catalyse the hydrolysis of β-1,4 bonds in mannan polymers, increases as germination progresses. The MAN gene family is represented by six members in the Brachypodium genome, and their expression has been explored in different organs and especially in germinating seeds. Transcripts of BdMAN2, BdMAN4 and BdMAN6 accumulate in embryos, with a maximum at 24–30h, and are detected in the coleorhiza and in the root by in situ hybridization analyses, before root protrusion (germination sensu stricto). BdMAN4 is not only present in the embryo root and coleorhiza, but is abundant in the de-embryonated (endosperm) imbibed seeds, while BdMAN2 and BdMAN6 are faintly expressed in endosperm during post-germination (36–42h). BdMAN4 and BdMAN6 transcripts are detected in the aleurone layer. These data indicate that BdMAN2, BdMAN4 and BdMAN6 are important for germination sensu stricto and that BdMAN4 and BdMAN6 may also influence reserve mobilization. Whether the coleorhiza in monocots and the micropylar endosperm in eudicots have similar functions, is discussed.

Relações filogenéticas das espécies de Crenicichla Heckel, 1840 e Teleocichla Kullander, 1988 (Teleostei: Cichlidae)

São reconhecidos 90 nomes específicos válidos de Crenicichla e oito de Teleocichla. Juntos, os dois gêneros-alvo do presente estudo compreendem quase 1/5 da diversidade total de Cichlinae, subfamília neotropical de Cichlidae. Apesar das espécies de Crenicichla e Teleocichla formarem um clado bem corroborado através de filogenias baseadas tanto em dados morfológicos quanto em dados moleculares, as relações entre as suas espécies foram ainda pouco estudadas. Os dois estudos filogenéticos de Crenicichla conhecidos são parcialmente discordantes entre si e incorporaram apenas uma parcela da diversidade do grupo. Baseados apenas em dados moleculares, não foram acompanhados por um estudo de caracteres morfológicos que indicariam as sinapomorfias ou características diagnósticas para identificação dos grupos monofiléticos delimitados. No presente estudo, os principais objetivos consistem em testar o monofiletismo do grupo formado pelas espécies de Crenicichla e Teleocichla e identificar e definir unidades monofiléticas dentro desse grupo, com base na análise cladística de caracteres morfológicos. Como objetivo secundário, são testadas as recentes hipóteses de relações filogenéticas dessas espécies com as demais espécies de ciclídeos neotropicais. Foram incluídas todas as espécies válidas de Teleocichla e 54 espécies válidas de Crenicichla (60% das espécies válidas), além de uma espécie nova de Teleocichla e cinco prováveis espécies novas de Crenicichla. 20 representantes de diferentes linhagens de Cichlinae foram incluídos, totalizando 88 táxons terminais. As análises cladísticas foram realizadas a partir de uma matriz com 211 caracteres provenientes do estudo comparado de morfologia externa, incluindo padrões de colorido e osteologia. Além da análise com pesagens igualitárias, foram explorados também os resultados das análises com pesagem implícita utilizando diferentes valores da variável k e com pesagem sucessiva. A partir da comparação e discussão dos resultados obtidos a partir das diferentes análises, a topologia obtida através da análise com pesagem implícita utilizando o valor de k=3 foi escolhida para obtenção das inferências filogenéticas. Duas classificações alternativas foram discutidas e, a fim de minimizar mudanças nomenclaturais, aquela baseada no reconhecimento de subgêneros de Crenicichla correspondendo aos grupos monofiléticos encontrados foi preferida em detrimento da proposta baseada no reconhecimento de vários gêneros. Isso porque o posicionamento de Crenicichla macrophthalma (espécie-tipo de Crenicichla) continua sendo considerado instável. O gênero Crenicichla é corroborado como um grande clado formado por todas as espécies de Crenicichla e Teleocichla incluídas e é sustentado por 40 sinapomorfias não-ambíguas. Um complexo cenário foi encontrado quanto às relações entre as espécies de Crenicichla, com várias linhagens dentro desse grande grupo, assim como era previsto de acordo com estudos filogenéticos prévios. As relações entre essas linhagens, por outro lado, são ainda instáveis, podendo variar de acordo com os diferentes tipos de pesagem aplicados e apresentam algumas divergências em relação aos estudos prévios, que também divergem entre si. Teleocichla é um grupo monofilético dentro de Crenicichla e foi considerado como um de seus oito subgêneros. O subgênero Crenicichla é constituído apenas por Crenicichla macrophthalma. Os seis subgêneros restantes (Wallaciia, Batrachops, Hemeraia, Saxatilia, Lugubria e Lacustria) correspondem totalmente ou parcialmente a grupos de espécies de Crenicichla previamente existentes na literatura. Em Lacustria, quatro complexos de espécies foram delimitados: C. missioneira, C. scotti, C. jaguarensis e C. lacustris sensu stricto. Foram listadas as espécies nominais de cada subgênero e uma diagnose para auxiliar a identificação dos mesmos foi elaborada. Uma nova hipótese de relações de Crenicichla em Cichlinae é inferida a partir da análise realizada, na qual Crenicichla é grupo-irmão de um clado formado por Chaetobranchus flavescens e todos os representantes de Cichlasomatini e Geophagini incluídos