Assignment of the bisulfide bridges in bothropstoxin-I, a Myonecrotic Lys49 PLA2 homolog from bothrops jararacussu snake venom

Bothropstoxin-I (BthTX-I), a Lys49 phospholipase A2 homolog with no apparent catalytic activity, was first isolated from Bothrops jararacussu snake venom and completely sequenced in this laboratory. It is a 121-amino-acid single polypeptide chain, highly myonecrotic, despite its inability to catalyze hydrolysis of egg yolk phospholipids, and has 14 half-cystine residues identified at positions 27, 29, 44, 45, 50, 51, 61, 84, 91, 96, 98, 105, 123, and 131 (numbering according to the conventional alignment including gaps, so that the last residue is Cys 131). In order to access its seven disulfide bridges, two strategies were followed: (1) Sequencing of isolated peptides from (tryptic + SV8) and chymotryptic digests by Edman-dansyl degradation; (2) crystallization of the protein and determination of the crystal structure so that at least two additional disulfide bridges could be identified in the final electron density map. Identification of the disulfide-containing peptides from the enzymatic digests was achieved following the disappearance of the original peptides from the HPLC profile after reduction and carboxymethylation of the digest. Following this procedure, four bridges were initially identified from the tryptic and SV8 digests: Cys50-Cysl31, Cys51-Cys98, Cys61-Cys91, and Cys84-Cys96. From the chymotryptic digest other peptides were isolated either containing some of the above bridges, therefore confirming the results from the tryptic digest, or presenting a new bond between Cys27 and Cys 123. The two remaining bridges were identified as Cys29-Cys45 and Cys44-Cysl05 by determination of the crystal structure, showing that BthTX-I disulfide bonds follow the normal pattern of group II PLA2s. © 2001 Plenum Publishing Corporation.

Structural, cytochemical, immunocytochemical and ultrastructural characterization of blood granulocytes of the roadside hawk Buteo magnirostris (Gmelin, 1788) (Avian, Falconiform)

In the peripheral blood of the roadside hawk, Buteo magnirostris, the following types of granulocytic leucocytes were identified: heterophil, eosinophil and basophil. The heterophils presented acidophilic and spindle shaped granules, the eosinophils possess spherical eosinophilic granules and the basophils showed spherical and basophilic granules. The heterophils and eosinophils presented positive cytochemical reaction to glycogen and basic polyaminoacid, while the eosinophils presented sudanophilic granules, which were also positive for myeloperoxidase. The heterophils, alone, presented positivity for acid phosphatase in some granules and immunoreactivity to TGF-β1 was observed only in the cytoplasm of the eosinophils. Electron microscopy demonstrated the heterophil granules as predominantly spindle shaped, being strongly electron-dense, while the eosinophils had numerous uniformly electron-dense spherical granules and the basophils presented three different types of granules identified according to their electron-density and the aspect of their matrix.

Towards forecasting and mitigating ionospheric scintillation effects on GNSS

The effect of the ionosphere on the signals of Global Navigation Satellite Systems (GNSS), such as the Global Positionig System (GPS) and the proposed European Galileo, is dependent on the ionospheric electron density, given by its Total Electron Content (TEC). Ionospheric time-varying density irregularities may cause scintillations, which are fluctuations in phase and amplitude of the signals. Scintillations occur more often at equatorial and high latitudes. They can degrade navigation and positioning accuracy and may cause loss of signal tracking, disrupting safety-critical applications, such as marine navigation and civil aviation. This paper addresses the results of initial research carried out on two fronts that are relevant to GNSS users if they are to counter ionospheric scintillations, i.e. forecasting and mitigating their effects. On the forecasting front, the dynamics of scintillation occurrence were analysed during the severe ionospheric storm that took place on the evening of 30 October 2003, using data from a network of GPS Ionospheric Scintillation and TEC Monitor (GISTM) receivers set up in Northern Europe. Previous results [1] indicated that GPS scintillations in that region can originate from ionospheric plasma structures from the American sector. In this paper we describe experiments that enabled confirmation of those findings. On the mitigation front we used the variance of the output error of the GPS receiver DLL (Delay Locked Loop) to modify the least squares stochastic model applied by an ordinary receiver to compute position. This error was modelled according to [2], as a function of the S4 amplitude scintillation index measured by the GISTM receivers. An improvement of up to 21% in relative positioning accuracy was achieved with this technnique.

Spatial electric load forecasting using a local movement approach

An agent based model for spatial electric load forecasting using a local movement approach for the spatiotemporal allocation of the new loads in the service zone is presented. The density of electrical load for each of the major consumer classes in each sub-zone is used as the current state of the agents. The spatial growth is simulated with a walking agent who starts his path in one of the activity centers of the city and goes to the limits of the city following a radial path depending on the different load levels. A series of update rules are established to simulate the S growth behavior and the complementarity between classes. The results are presented in future load density maps. The tests in a real system from a mid-size city show a high rate of success when compared with other techniques. The most important features of this methodology are the need for few data and the simplicity of the algorithm, allowing for future scalability. © 2009 IEEE.

A combined theoretical and experimental study of electronic structure and optical properties of β-ZnMoO4 microcrystals

In this paper, a combined theoretical and experimental study on the electronic structure and photoluminescence (PL) properties of beta zinc molybdate (β-ZnMoO4) microcrystals synthesized by the hydrothermal method has been employed. These crystals were structurally characterized by X-ray diffraction (XRD), Rietveld refinement, Fourier transform Raman (FT-Raman) and Fourier transform infrared (FT-IR) spectroscopies. Their optical properties were investigated by ultraviolet-visible (UV-Vis) absorption spectroscopy and PL measurements. First-principles quantum mechanical calculations based on the density functional theory at the B3LYP level have been carried out. XRD patterns, Rietveld refinement, FT-Raman and FT-IR spectra showed that these crystals have a wolframite-type monoclinic structure. The Raman and IR frequencies experimental results are in reasonable agreement with theoretically calculated results. UV-Vis absorption measurements shows an optical band gap value of 3.17 eV, while the calculated band structure has a value of 3.22 eV. The density of states indicate that the main orbitals involved in the electronic structure of β-ZnMoO4 crystals are (O 2p-valence band and Mo 4d-conduction band). Finally, PL properties of β-ZnMoO4 crystals are explained by means of distortions effects in octahedral [ZnO6] and [MoO6] clusters and inhomogeneous electronic distribution into the lattice with the electron density map. © 2013 Elsevier Ltd. All rights reserved.

Influência da estrutura de corantes azo na cinética de degradação por processo foto-Feton e ferro zero e na toxicidade

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

A teoria do funcional da densidade na caracterização de fases intermetálicas ordenadas

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Investigações preliminares sobre a influência do clima espacial no posicionamento relativo com GNSS

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Influência de sistemas meteorológicos de grande escala sobre a distribuição de raios na Amazônia Oriental, com aplicação no setor elétrico

Foi feito um estudo da associação entre a densidade de ocorrência de raios com condições meteorológicas no leste da região Amazônica entre os anos de 2006 a 2008. A região estudada foi limitada por uma grade geográfica entre as latitudes 0º a -10º e longitudes -53º a -43º. Foram desenvolvidos métodos computacionais de processamento estatístico e geração de mapas de ocorrências de raios para diferentes intervalos de tempo. Esses métodos foram aplicados para determinar os pontos de altas ocorrências de raios ao longo de linhas de transmissão de energia elétrica, a fim de oferecer subsídios para a proteção e operação dos sistemas elétricos da região. Foram utilizados dados da rede de detecção de raios do SIPAM para redimensionar a detecção do sistema de alcance intercontinental STARNET, e subsequentemente, foram obtidos mapas de densidade de raios mais uniformes e realistas. Esses mapas foram interpretados em períodos semanais e sazonais, considerando as observações simultâneas de chuva, vento, radiação de onda longa e a presença de sistemas meteorológicos de grande escala. Zona de Convergência Intertropical e Zona de Convergência do Atlântico Sul (ZCIT, ZCAS) definidos pela convergência de ventos e anomalias negativas de Radiação de Ondas Longas ( ROL). Os resultados mostraram boa correspondência entre as áreas de convecção e a intensa ocorrência de raios. Nas regiões de mais alta atividade elétrica atmosférica, foi observada ocorrência de convergência dos ventos e anomalias negativas de ROL, para situações de presença de ZCAS e ZCIT sobre a região. A atividade de raios também coincidiu, com algumas exceções, com áreas de maior precipitação em períodos semanais. Foi observado também que, durante um trimestre seco, os segmentos de linhas de transmissão de Mojú-Tailândia e Jacundá-Marabá apresentaram maior incidência de raios. O pico da densidade de raios chegou a 18 raios/km²/trimestre em alguns locais. Durante o trimestre chuvoso, a densidade geral de raios foi 86% maior e apresentou distribuição espacial mais uniforme quando comparada com um trimestre seco. Este estudo mostrou não somente como as características meteorológicas influenciaram na distribuição e quantidade raios, mas também que a elevada atividade de descargas elétricas na região deve ser uma preocupação importante para os sistemas de distribuição de energia elétrica e outras atividades humanas na Amazônia Oriental.

Análises estrutural, nanoestrutural, e quantitativa de fases em materiais cerâmicos de interesse tecnológico, utilizando difração de raios X pelo método do pó

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Degradação de antibióticos sulfonamidas por processo foto-Feton: identificação de intermediários

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Structural, electronic and optical properties of Fe(III) complex with pyridine-2,6-dicarboxylic acid: A combined experimental and theoretical study

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Ultrastructural Study of the Denervated Diaphragm in Rats

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Crystallization and preliminary X-ray crystallographic analysis of importin-alpha from Neurospora crassa

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Desenvolvimento de uma plataforma analítica para aquisição de imagens moleculares em tecidos animais

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)