Mixing process in estuaries

A theoretical expression for vertical profile-of horizontal velocity in terms of its depth-average is derived based on oscillatory boundary layer theory and estuarine flow characteristics. The derived theoretical profile is then incorporated into a vertical quasi-two-dimensional model, which is proved advantageous in more physical implications and less CPU time demand. To validate the proposed model, the calculated results are compared to the field data in the Yangtze River Estuary, exhibiting good agreement with observations. The proposed quasi-two-dimensional vertical model is used to study mixing process, especially dependence of salinity distribution and salt front strength on runoff and tides in estuaries.

A schematic analysis and discussion of species taken by otter trawl net by the research vessel Orion from July, 1965 to June 1966 in the Chesapeake Bay and major tributaries

From July 1965 to June 1964 the Natural Resources Institute's Research Vessel ORION took 16 minute tows with a forty (40) foot otter trawl net at 38 selected locations in Chesapeake Bay from the south of the Potomac River to Turkey Point at the head of the Bay and including some tributaries. Shallow and deep hauls were taken at most stations with depths ranging from 5 to 140 feet. A schematic summary of the 54 different species caught was compared with "Fishes of the Chesapeake Bay" by S. F. Hildebrand and W. C. Schroeder. Sixteen species including five not contained in the above references were selected for discussion. (PDF contains 21 pages)

Effects of the Maryland hydraulic clam dredge on populations of the soft-shell clam, Mya arenaria: final contract report

Final report on a three year study designed to investigate the effects of the Maryland hydraulic escalator clam dredge on populations and recruitment of the soft-shell clam, Mya arenaria. Experimental plots were established in the Potomac river, Maryland, and were dredged ina commerical manner by removing only legal size clams. quarterly samples were taken in the experimental and control plots by means of a van Veen grab for juvenile clams and the hydraulic dredge for older, deeper burrowing clams. Sediment samples were taken at selected periods for organic carbon and grain size analysis. Clams were separated into two size-groups. (PDF contains 38 pages)

Algas verdes en el picoplancton y nanoplancton del estuario del río Nervión (Golfo de Vizcaya)

332 p. : il., gráf.

Metalak eta metaloideak itsasadarretan: kutsadura jarraitzeko erreminta analitikoen

265 p.

Artisanal fisheries status and sustainable management options in Teknaf coast, Bangladesh

The study was an endeavor to bring forward a concise, factual description of the salient features of the present status of artisanal fisheries resources and its management for sustainable development of fishing communities in Teknaf coast, Cox’s Bazar, Bangladesh. This study was conducted through 14 fishing villages of 4 Unions in Teknaf Upazila. As a hub of various fisheries deeds, a comprehensive coastal fisheries census, conducted on the coast during the study period, revealed that about 566 fishing fleet of two types, 1263 fishing gears of seven kinds, 6466 fishermen were being involved in fishing at Naaf river estuary. The catch composition of the coastal fishing was found 52 finfish species, 10 shrimp and 3 crabs. The unique potentialities provided by mostly affluent fisheries resources are needed to be tapped and channelized in the appropriate direction for maintaining a paragon of these fisheries resources of coastal area and for pursuing ecologically sustainable development via environment friendly intrinsic exploration and exploitation. “Community Based Fisheries Co-management” program should initiate immediately for the fisherman community of Naaf river estuary of Teknaf coastal region. This will go along way to help sustain the coastal fisheries resources with active participation of the fishermen

Problemas inversos aplicados à identificação de parâmetros hidrodinâmicos de um modelo do estuário do rio Macaé

Esta tese tem por objetivo propor uma estratégia de obtenção automática de parâmetros hidrodinâmicos e de transporte através da solução de problemas inversos. A obtenção dos parâmetros de um modelo físico representa um dos principais problemas em sua calibração, e isso se deve em grande parte à dificuldade na medição em campo desses parâmetros. Em particular na modelagem de rios e estuários, a altura da rugosidade e o coeficiente de difusão turbulenta representam dois dos parâmetros com maior dificuldade de medição. Nesta tese é apresentada uma técnica automatizada de estimação desses parâmetros através deum problema inverso aplicado a um modelo do estuário do rio Macaé, localizado no norte do Rio de Janeiro. Para este estudo foi utilizada a plataforma MOHID, desenvolvida na Universidade Técnica de Lisboa, e que tem tido ampla aplicação na simulação de corpos hídricos. Foi realizada uma análise de sensibilidade das respostas do modelo com relação aos parâmetros de interesse. Verificou-se que a salinidade é uma variável sensível a ambos parâmetros. O problema inverso foi então resolvido utilizando vários métodos de otimização através do acoplamento da plataforma MOHID a códigos de otimização implementados em Fortran. O acoplamento foi realizado de forma a não alterar o código fonte do MOHID, possibilitando a utilização da ferramenta computacional aqui desenvolvida em qualquer versão dessa plataforma, bem como a sua alteração para o uso com outros simuladores. Os testes realizados confirmam a eficiência da técnica e apontam as melhores abordagens para uma rápida e precisa estimação dos parâmetros.

Assessing trends in the density of Atlantic croaker (Micropogonias undulatus): a comparison of passive acoustic and trawl methods

Using data collected simultaneously from a trawl and a hydrophone, we found that temporal and spatial trends in densities of juvenile Atlantic croaker (Micropogonias undulatus) in the Neuse River estuary in North Carolina can be identified by monitoring their sound production. Multivariate analysis of covariance (MA NCOVA) revealed that catch per unit of effort (CPUE) of Atlantic croaker had a significant relationship with the dependent variables of sound level and peak frequency of Atlantic croaker calls. Tests of between-subject correspondence failed to detect relationships between CPUE and either of the call parameters, but statistical power was low. Williamson’s index of spatial overlap indicated that call detection rate (expressed by a 0–3 calling index) was correlated in time and space with Atlantic croaker CPUE. The correspondence between acoustic parameters and trawl catch rates varied by month and by habitat. In general, the calling index had a higher degree of overlap with this species’ density than did the received sound level of their calls. Classification and regression tree analysis identified calling index as the strongest correlate of CPUE. Passive acoustics has the potential to be an inexpensive means of identifying spatial and temporal trends in abundance for soniferous fish species.

Spatial and temporal distribution and the potential for estuarine interactions between wild and hatchery chum salmon (Oncorhynchus keta) in Taku Inlet, Alaska

We investigated estuarine spatial and temporal overlap of wild and marked hatchery chum salmon (Oncorhynchus keta) fry; the latter included two distinct size groups released near the Taku River estuary (Taku Inlet) in Southeast Alaska (early May releases of ~ 1.9 g and late May releases of ~ 3.9 g wet weight). Our objectives were to compare abundance, body size, and condition of wild chum salmon fry and hatchery chum salmon fry raised under early and late rearing strategies in different habitats of Taku Inlet and to document environmental factors that could potentially explain the distribution, size, and abundance of these chum salmon fr y. We used a sampling design stratified into inner and outer inlet and neritic and littoral habitats. Hatchery fry were rare in the inner estuary in both years but outnumbered wild fry 20:1 in the outer estuary. Hatchery fry were significantly larger than wild fry in both littoral and neritic samples. Abundances of wild and hatchery fry were positively correlated in the outer inlet, indicating the formation of mixed schools of hatchery and wild fry. Spatial and temporal overlap was greatest between wild and early hatchery fry in the outer inlet in both habitats. The early hatchery release coincided with peak abundances of wild fry in the outer inlet, and the distribution of wild and early hatchery fry overlapped for about three weeks. Our results demonstrate that the timing of release of hatchery fry may affect interactions with wild fry.

Temporal and spatial aspects of bottlenose dolphin occurrence in coastal and estuarine waters near Charleston, South Carolina

The spatial and temporal occurrence of Atlantic bottlenose dolphins (Tursiops truncatus) in the coastal and estuarine waters near Charleston, SC were evaluated. Sighting and photographic data from photo-identification (ID), remote biopsy, capture-release and radio-tracking studies, conducted from 1994 through 2003, were analyzed in order to further delineate residence patterns of Charleston area bottlenose dolphins. Data from 250 photo-ID, 106 remote biopsy, 15 capture-release and 83 radio-tracking surveys were collected in the Stono River Estuary (n = 247), Charleston Harbor (n = 86), North Edisto River (n = 54), Intracoastal Waterway (n = 26) and the coastal waters north and south of Charleston Harbor (n = 41). Coverage for all survey types was spatially and temporally variable, and in the case of biopsy, capture-release and radio-tracking surveys, data analyzed in this report were collected incidental to other research. Eight-hundred and thirty-nine individuals were photographically identified during the study period. One-hundred and fifteen (13.7%) of the 839 photographically identified individuals were sighted between 11-40 times, evidence of consistent occurrence in the Charleston area (i.e., site fidelity). Adjusted sighting proportions (ASP), which reflect an individual’s sighting frequency in a subarea relative to other subareas after adjusting for survey effort, were analyzed in order to evaluate dolphin spatial occurrence. Forty-three percent (n = 139) of dolphins that qualified for ASP analyses exhibited a strong subarea affiliation while the remaining 57% (n = 187) showed no strong subarea preference. Group size data were derived from field estimates of 2,342 dolphin groups encountered in the five Charleston subareas. Group size appeared positively correlated with degree of “openness” of the body of water where dolphins were encountered; and for sightings along the coast, group size was larger during summer months. This study provides valuable information on the complex nature of bottlenose dolphin spatial and temporal occurrence near Charleston, SC. In addition, it helps us to better understand the stock structure of dolphins along the Atlantic seaboard.

Severe droughts reduce estuarine primary productivity with cascading effects on higher trophic levels

Using a 10-yr time-series data set, we analyzed the effects of two severe droughts on water-quality and ecosystem processes in a temperate, eutrophic estuary (Neuse River Estuary, North Carolina). During the droughts, dissolved inorganic nitrogen concentrations were on average 46–68% lower than the long-term mean due to reduced riverine input. Phytoplankton productivity and biomass were slightly below average for most of the estuary during a spring–autumn drought in 2002, but were dramatically lower than average throughout the estuary during an autumn–winter drought in 2007–2008. Droughts affected upper trophic levels through alteration of both habitat condition (i.e., bottom-water dissolved oxygen levels) and food availability. Bottomwater dissolved oxygen levels were near or slightly above average during the 2002 drought and during summer 2007. Concomitant with these modest improvements in bottom-water oxygen condition, fish kills were greatly reduced relative to the long-term average. Low-oxygen bottom-water conditions were more pronounced during summer 2008 in the latter stages of the 2007–2008 drought, and mesozooplankton abundances were eight-fold lower in summer 2008 than during nondrought years. Below-average mesozooplankton abundances persisted for well over 1 yr beyond cessation of the drought. Significant fish kills were observed in summer 2008 and 2009, perhaps due to the synergistic effects of hypoxia and reduced food availability. These results indicate that droughts can exert both ephemeral and prolonged multiyear influence on estuarine ecosystem processes and provide a glimpse into the future, when many regions of the world are predicted to face increased drought frequency and severity due to climate change.

The relative value of different estuarine nursery areas in North Carolina for transient juvenile marine fishes

Offshore winter-spawned fishes dominate the nekton of south-eastern United States estuaries. Their juveniles reside for several months in shallow, soft bottom estuarine creeks and bays called primary nursery areas. Despite similarity in many nursery characteristics, there is, between and within species, variability in the occupation of these habitats. Whether all occupied habitats are equally valuable to individuals of the same species or whether most recruiting juveniles end up in the best habitats is not known. If nursery quality varies, then factors controlling variation in pre-settlement fish distribution are important to year-class success. If nursery areas have similar values, interannual variation in distribution across nursery creeks should have less effect on population sizes or production. I used early nursery period age-specific growth and mortality rates of spot (Leiostomus xanthurus) and Atlantic croaker (Micropogonias undulatus)—two dominant estuarine fishes—to assess relative habitat quality across a wide variety of nursery conditions, assuming that fish growth and mortality rates were direct reflections of overall physical and biological conditions in the nurseries. I tested the hypothesis that habitat quality varies for these fishes by comparing growth and mortality rates and distribution patterns across a wide range of typical nursery habitats at extreme ends of two systems. Juvenile spot and Atlantic croaker were collected from 10 creeks in the Cape Fear River estuary and from 18 creeks in the Pamlico Sound system, North Carolina, during the 1987 recruitment season (mid-March–mid-June). Sampled creeks were similar in size, depth, and substrates but varied in salinities, tidal regimes, and distances from inlets. Spot was widely distributed among all the estuarine creeks, but was least abundant in the creeks in middle reaches of both systems. Atlantic croaker occurred in the greatest abundance in oligohaline creeks of both systems. Instantaneous growth rates derived from daily otolith ages were generally similar for all creeks and for both species, except that spot exhibited a short-term growth depression in the upriver Pamlico system creeks—perhaps the result of the long migration distance of this species to this area. Spot and Atlantic croaker from upriver oligohaline creeks exhibited lower mortality rates than fish from downstream polyhaline creeks. These results indicated that even though growth was similar at the ends of the estuaries, the upstream habitats provided conditions that may optimize fitness through improved survival.

黄河口滨岸潮滩湿地系统氮生物循环特征与循环模式研究

潮滩湿地处于海陆相互作用地带，是响应全球变化和人类活动较为敏感的生态系统 之一。潮滩湿地是海岸带一个非常重要的生态类型，作为陆地和海洋过渡区的重要组成 部分，承接来自陆地人类活动带来的大量含氮物质。潮滩湿地氮的生物循环特征不但影 响湿地系统自身的调节机制，而且其在环境介质中的特殊动力学过程也与一系列全球环 境问题息息相关。为了更深入的理解潮滩湿地氮的生物循环特征及其关键机制，论文以 黄河口滨岸潮滩翅碱蓬湿地为研究对象，通过野外样品采集、原位实验、微区试验，研 究了湿地土壤氮的时空分布与化学转化特征，探讨了湿地植物生物量与氮累积季节变化 特征以及湿地植物残体分解及分解过程氮动态特征，建立了湿地植物-土壤系统氮循环 分室模式，主要结论如下：（1）潮滩湿地土壤氮含量具有明显的水平变异和空间结构， TN、NO3 --N 和C/N 具有明显空间分布格局，其空间变异性均以向低潮滩延伸且受潮汐 涨落影响较大的方向最大；微地貌特征和潮汐微域物理扰动是导致空间异质性的两个重 要随机因素，水盐条件、土壤类型和潮汐物理扰动是三个重要结构因素；（2）潮滩湿地 土壤氮含量在不同时期的垂直分布均存在较高变异性，主要与有机质分布、潮汐影响、 水分条件以及陆源影响程度有关；潮滩湿地土壤的氮含量具有明显季节变化特征，主要 与水分状况及受潮汐影响的程度有关；（3）潮滩湿地土壤氮的净矿化/硝化速率均呈波动 变化，并受生物固持、反硝化、温度、水分、C/N 和pH 等因素影响；潮滩湿地0~15cm 土壤的净矿化量和净硝化量分别介于0.33~27.81kg·hm-2 和1.19~15.99kg·hm-2，高潮滩湿 地维持无机氮的能力明显强于中潮滩和低潮滩湿地；（4）两种表现型翅碱蓬的生物量 均具有明显季节变化和空间结构分形特征，二者的地上生物量具有自相似性，分别遵从 D=2.012 和2.366 的分形生长过程；（5）沉积强度显著影响翅碱蓬种子的出苗和幼苗存 活，适度沉积可刺激幼苗生长，重度沉积对幼苗生长则具有抑制作用；沉积可促使幼苗 被埋部分发育为根系，反映了其对潮滩较强沉积环境的特殊适应对策；（6）两种表现 型翅碱蓬根、茎和枯落物的TN 含量均呈递减变化，符合指数衰减模型，叶是二者重要 氮储库，分配比高达46.91±16.97%和55.21±9.79%；中潮滩植被的N/P 为9.87±3.47＜14， 其生长受N 限制，低潮滩植被的N/P 为15.73±5.00＜16，其生长同时受N、P 限制，但 更受P 限制；（7）潮滩湿地植物残体在水盐含量较高或沉积较强条件下的失重率和分解 速率一般较高，反之则较低；温度、水分、盐分和pH 是影响残体相对分解速率的重要 摘 要 II 因素；（8）当分解环境的养分状况不发生较大改变时，残体相对分解速率在很大程度上 取决于基质质量，当养分状况因潮汐养分交换、潮汐物理扰动、沉积物矿化等发生较大 改变时，残体相对分解速率在很大程度上取决于分解环境养分供给状况；（9）潮滩湿地 植物残体在不同水盐梯度和沉积强度下的氮含量、C/N 的变化模式整体较为一致，水盐 条件和沉积强度对残体氮绝对量的变化具有重要影响，C/N 对分解过程中氮养分的调控 作用更为重要；（

Spring Diatom Blooming Phases in a Representative Eutrophic Bay of the Three-Gorges Reservoir, China

We investigated dynamics of the phytoplankton community and abiotic factors in Xiangxi Bay of the Three-Gorge Reservoir, China, by daily sampling, a specific site during a spring algal bloom (February 23-April 28, 2005). Among the 76 taxa observed, Asterionella formosa and Cyclotella spp. were the dominants, accounting for 47.2% and 29.9% of the total abundance, respectively. We determined the five distinct developing phases of the bloom by analyzing the dissimilarity of physicochemical parameters. Simultaneously, six phytoplankton community groups were distinguished by TWINSPAN classifications. The pattern for algal community succession was similar to that for the bloom phase shift, and the structural complexity of communities significantly decreased over time. Water temperature and silicate were the main factors that related to the development of the bloom and the shifts of the phytoplankton community.

Monitoring organochlorine pesticides and polychlorinated biphenyls in Baiyangdian Lake using microbial communities

We used polyurethane foam units (PFUs) to collect persistent organic pollutants (POPs) from four sites in Baiyangdian Lake in July 2003. Following extraction from the PFUs, relative concentrations of seven organochlorine pesticides (OCPs) and ten polychlorinated biphenyls (PCBs) were determined by gas chromatography. OCPs and PCBs were detected in the microbial communities from all the four sampling stations. In terms of the total concentration of POPs (OCPs+ PCBs), two river estuary stations had more POP (18.45 mu g/L and 9.77 mu g/L) than the two mid-lake stations (4.75 mu g/L and 5.21 mu g/L), indicating that Baiyangdian Lake was significantly impacted by inflow from the Fu River and Baigou River.