Avaliação da indução de resistência no controle do crestamento bacteriano comum do feijão vagem

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Ação de indutores bióticos e abióticos no controle da ferrugem do eucalipto, atividade enzimática e expressão gênica durante o processo de infecção

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Enxertia hipocotiledonar e convencional de maracujazeiro-amarelo sobre três porta-enxertos

Pós-graduação em Agronomia - FEIS

Método de otimização do processo de produção da goma xantana

O qual se refere a um processo biológico de produção da goma xantana através da propagação celular das bactérias Xanthomonas axonopodis pv. manihotis e/ou Xanthomonas campestris pv campestris e/ou Xanthomonas spp, em cultivos biotecnológicos em condições específicas, bem como etapas de separação e purificação do molécula, sendo que, nessa invenção é utilizado para comprovar a otimização do processo de produção da xantana, parâmetros específicos quantitativo, tais como o rendimento do produto (goma xantana produzida pelo açúcar consumido), aqui simbolizado Yp/s.

Suscetibilidade à podridão negra e produtividade de brócolis em função de doses de nitrogênio e potássio

The purpose of this study was to investigate the influence of potassium and nitrogen on the severity of black rot and yield of head. The experiment was carried out in split plots with factorial subplots, in randomized blocks with four replications. In the plots we assessed the influence of inoculation (injured plants with distilled water and inoculated with Xanthomonas campestris pv. campestris) and in the subplots we evaluated the 4 x 4 factorial, potassium doses (0, 275, 550 and 825 kg ha-1) and nitrogen (0, 150, 300 and 450 kg ha-1). The hybrid Broccoli BRO68 was inoculated using the toothpick method at 64 days after sowing. We observed that potassium in the plant reduced the disease, but nitrogen increased disease. We estimated that the highest levels of potassum in the plant reduced the severity of the disease but lack or excess of nitrogen increased disease severity. The highest production of broccoli inflorescence was obtained at doses from 541 to 751 kg ha-1 of K2O and 286 to 328 kg ha-1 of N. However, when considering a balanced fertilization to obtain higher yield and size of inflorescences and greater resistance to black rot, the ideal doses are 283 kg ha-1 of N and 550 kg ha-1 of K2O.

Antibacterial activity of alkyl gallates is a combination of direct targeting of FtsZ and permeabilization of bacterial membranes

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Type IV secretion system is not involved in infection process in citrus

The type IV secretion system (T4SS) is used by Gram-negative bacteria to translocate protein and DNA substrates across the cell envelope and into target cells. Xanthomonas citri subsp. citri contains two copies of the T4SS, one in the chromosome and the other is plasmid-encoded. To understand the conditions that induce expression of the T4SS in Xcc, we analyzed, in vitro and in planta, the expression of 18 ORFs from the T4SS and 7 hypothetical flanking genes by RT-qPCR. As a positive control, we also evaluated the expression of 29 ORFs from the type III secretion system (T3SS), since these genes are known to be expressed during plant infection condition, but not necessarily in standard culture medium. From the 29 T3SS genes analyzed by qPCR, only hrpA was downregulated at 72 h after inoculation. All genes associated with the T4SS were downregulated on Citrus leaves 72 h after inoculation. Our results showed that unlike the T3SS, the T4SS is not induced during the infection process.

Taxonomia e potencial antimicrobiano de fungos depositados no acervo de pesquisa da Central de Recursos Microbianos da UNESP

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Control of bacterial spot of tomato and activation of enzymes related to resistance by chemicals under field conditions

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Síntese, caracterização e avaliação biológica de quelatos metálicos contendo ligantes de origem natural

O trabalho que será aqui apresentado teve como finalidade reunir os resultados obtidos dentro do Laboratório de Organometálicos II em relação aos estudos realizados acerca da interação de íons metálicos com ligantes orgânicos naturais. Os dados apresentados foram obtidos pela autora deste trabalho, e também pelos professores Francisco Otávio Cintra Ferrarini, José Roberto Stefanelli Junior e pela aluna de Iniciação Científica Angélica Romão Carvalho. Hidrolisado proteico de soro de leite bovino e torta de linhaça foram os materiais obtidos, após uma série de operações que envolveram filtração com caulim, diálise, hidrólise enzimática, liofilização, etc., após as quais foram utilizados neste trabalho como ligantes de origem natural. Os metais de transição cobre, ferro, cobalto, zinco, paládio, platina e prata foram utilizados nas reações de complexação com os hidrolisados para obtenção de complexos metálicos, através do uso de diferentes rotas sintéticas (convencional, micro-ondas, hidrotérmica, difusão) e parâmetros experimentais (pH, solvente, natureza do precursor, etc.). A escolha dos íons metálicos baseou-se no interesse em preparar compostos que apresentassem ao mesmo tempo alta biodisponibilidade, baixa citotoxicidade e diversas aplicações biológicas. O uso do cobalto deveu-se à reconhecida propriedade que os micro-organismos do sistema digestório dos ruminantes apresenta de sintetizar a vitamina B12 e, portanto, os compostos desse metal podem ser usados em rações visando um melhor desenvolvimento do animal. O ferro, conhecidamente, é um importante metal para os seres humanos, estando presente na hemoglobina, sendo assim, também consiste em uma substância nutracêutica de relevado interesse. À propósito, cabe salientar que os compostos de ferro (III) obtidos nesse trabalho serão objeto de avaliação do uso como suplemento alimentar, em colaboração com o Departamento de...

Síntese, caracterização e avaliação biológica de quelatos metálicos contendo ligantes de origem natural

O trabalho que será aqui apresentado teve como finalidade reunir os resultados obtidos dentro do Laboratório de Organometálicos II em relação aos estudos realizados acerca da interação de íons metálicos com ligantes orgânicos naturais. Os dados apresentados foram obtidos pela autora deste trabalho, e também pelos professores Francisco Otávio Cintra Ferrarini, José Roberto Stefanelli Junior e pela aluna de Iniciação Científica Angélica Romão Carvalho. Hidrolisado proteico de soro de leite bovino e torta de linhaça foram os materiais obtidos, após uma série de operações que envolveram filtração com caulim, diálise, hidrólise enzimática, liofilização, etc., após as quais foram utilizados neste trabalho como ligantes de origem natural. Os metais de transição cobre, ferro, cobalto, zinco, paládio, platina e prata foram utilizados nas reações de complexação com os hidrolisados para obtenção de complexos metálicos, através do uso de diferentes rotas sintéticas (convencional, micro-ondas, hidrotérmica, difusão) e parâmetros experimentais (pH, solvente, natureza do precursor, etc.). A escolha dos íons metálicos baseou-se no interesse em preparar compostos que apresentassem ao mesmo tempo alta biodisponibilidade, baixa citotoxicidade e diversas aplicações biológicas. O uso do cobalto deveu-se à reconhecida propriedade que os micro-organismos do sistema digestório dos ruminantes apresenta de sintetizar a vitamina B12 e, portanto, os compostos desse metal podem ser usados em rações visando um melhor desenvolvimento do animal. O ferro, conhecidamente, é um importante metal para os seres humanos, estando presente na hemoglobina, sendo assim, também consiste em uma substância nutracêutica de relevado interesse. À propósito, cabe salientar que os compostos de ferro (III) obtidos nesse trabalho serão objeto de avaliação do uso como suplemento alimentar, em colaboração com o Departamento de...

Epicoccum nigrum P16, a Sugarcane Endophyte, Produces Antifungal Compounds and Induces Root Growth

Background: Sugarcane is one of the most important crops in Brazil, mainly because of its use in biofuel production. Recent studies have sought to determine the role of sugarcane endophytic microbial diversity in microorganism-plant interactions, and their biotechnological potential. Epicoccum nigrum is an important sugarcane endophytic fungus that has been associated with the biological control of phytopathogens, and the production of secondary metabolites. In spite of several studies carried out to define the better conditions to use E. nigrum in different crops, little is known about the establishment of an endophytic interaction, and its potential effects on plant physiology. Methodology/Principal Findings: We report an approach based on inoculation followed by re-isolation, molecular monitoring, microscopic analysis, plant growth responses to fungal colonization, and antimicrobial activity tests to study the basic aspects of the E. nigrum endophytic interaction with sugarcane, and the effects of colonization on plant physiology. The results indicate that E. nigrum was capable of increasing the root system biomass and producing compounds that inhibit the in vitro growth of sugarcane pathogens Fusarium verticillioides, Colletotrichum falcatum, Ceratocystis paradoxa, and Xanthomomas albilineans. In addition, E. nigrum preferentially colonizes the sugarcane surface and, occasionally, the endophytic environment. Conclusions/Significance: Our work demonstrates that E. nigrum has great potential for sugarcane crop application because it is capable of increasing the root system biomass and controlling pathogens. The study of the basic aspects of the interaction of E. nigrum with sugarcane demonstrated the facultative endophytism of E. nigrum and its preference for the phylloplane environment, which should be considered in future studies of biocontrol using this species. In addition, this work contributes to the knowledge of the interaction of this ubiquitous endophyte with the host plant, and also to a better use of microbial endophytes in agriculture.

Different patterns of evolution for duplicated DNA repair genes in bacteria of the Xanthomonadales group

Abstract Background DNA repair genes encode proteins that protect organisms against genetic damage generated by environmental agents and by-products of cell metabolism. The importance of these genes in life maintenance is supported by their high conservation, and the presence of duplications of such genes may be easily traced, especially in prokaryotic genomes. Results The genome sequences of two Xanthomonas species were used as the basis for phylogenetic analyses of genes related to DNA repair that were found duplicated. Although 16S rRNA phylogenetic analyses confirm their classification at the basis of the gamma proteobacteria subdivision, differences were found in the origin of the various genes investigated. Except for lexA, detected as a recent duplication, most of the genes in more than one copy are represented by two highly divergent orthologs. Basically, one of such duplications is frequently positioned close to other gamma proteobacteria, but the second is often positioned close to unrelated bacteria. These orthologs may have occurred from old duplication events, followed by extensive gene loss, or were originated from lateral gene transfer (LGT), as is the case of the uvrD homolog. Conclusions Duplications of DNA repair related genes may result in redundancy and also improve the organisms' responses to environmental challenges. Most of such duplications, in Xanthomonas, seem to have arisen from old events and possibly enlarge both functional and evolutionary genome potentiality.

Structure of the PilZ-FimXEAL-c-di-GMP complex responsible for the regulation of bacterial type IV pilus biogenesis

Signal transduction pathways mediated by cyclic-bis(3'→5')-dimeric GMP (c-di-GMP) control many important and complex behaviors in bacteria. C-di-GMP is synthesized through the action of GGDEF domains that possess diguanylate cyclase activity and is degraded by EAL or HD-GYP domains with phosphodiesterase activity. There is mounting evidence that some important c-di-GMP-mediated pathways require protein-protein interactions between members of the GGDEF, EAL, HD-GYP and PilZ protein domain families. For example, interactions have been observed between PilZ and the EAL domain from FimX of Xanthomonas citri (Xac). FimX and PilZ are involved in the regulation of type IV pilus biogenesis via interactions of the latter with the hexameric PilB ATPase associated with the bacterial inner membrane. Here, we present the crystal structure of the ternary complex made up of PilZ, the FimX EAL domain (FimXEAL) and c-di-GMP. PilZ interacts principally with the lobe region and the N-terminal linker helix of the FimXEAL. These interactions involve a hydrophobic surface made up of amino acids conserved in a non-canonical family of PilZ domains that lack intrinsic c-di-GMP binding ability and strand complementation that joins β-sheets from both proteins. Interestingly, the c-di-GMP binds to isolated FimXEAL and to the PilZ-FimXEAL complex in a novel conformation encountered in c-di-GMP-protein complexes in which one of the two glycosidic bonds is in a rare syn conformation while the other adopts the more common anti conformation. The structure points to a means by which c-di-GMP and PilZ binding could be coupled to FimX and PilB conformational states

A secreted Salmonella protein with homology to an avirulence determinant of plant pathogenic bacteria

Bacterial pathogens have evolved sophisticated mechanisms to interact with their hosts. A specialized type III protein secretion system capable of translocating bacterial proteins into host cells has emerged as a central factor in the interaction between a variety of mammalian and plant pathogenic bacteria with their hosts. Here we describe AvrA, a novel target of the centisome 63 type III protein secretion system of Salmonella enterica. AvrA shares sequence similarity with YopJ of the animal pathogen Yersinia pseudotuberculosis and AvrRxv of the plant pathogen Xanthomonas campestris pv. vesicatoria. These proteins are the first examples of putative targets of type III secretion systems in animal and plant pathogenic bacteria that share sequence similarity. They may therefore constitute a novel family of effector proteins with related functions in the cross-talk of these pathogens with their hosts.