Influence of hard bottom morphology on fish assemblages of the continental shelf off Georgia, southeastern USA

Various reef types worldwide have inconsistent relationships among fish assemblage parameters and benthic characteristics, thus there is a need to identify factors driving assemblage structure specific to each reef type and locale. Limestone ledges are known to be key habitats for bottom fish on the continental shelf of the southeastern USA, however, the specific factors that link them to fish assemblages have not been quantified. Bottom fishes and habitat characteristics on ledges were surveyed at a study site located centrally in the southeastern USA continental shelf. Species richness, diversity, abundance, and biomass of fish were higher at ledges than on flat bottom. Species richness, abundance, and biomass of fish were well explained by ledge variables including percent cover of sessile invertebrates, total height, and height of undercut recesses. Multivariate analyses based on biomass of individual species at ledges revealed two fish assemblages associated with four ledge types. One assemblage was associated with ledges that were tall, heavily colonized with sessile invertebrates, large in area, and did or did not have undercuts. The other assemblage was associated with ledges that were short, not undercut, smaller in area, and were or were not heavily colonized by invertebrates. Seafloor classification schemes presently used in the region do not adequately capture hard bottom diversity to identify the location and extent of essential fish habitats for ecological and fisheries purposes. Given that ledges cover only ∼1% to 5% of the southeastern USA continental shelf, they merit the highest levels of consideration in regional research, conservation, and management plans.

Temporal trends in reef fish assemblages inside Virgin Islands National Park and around St. John, U.S. Virgin Islands, 1988-2006

This report is a result of long-term fish monitoring studies supported by the National Park Service (NPS) at the Virgin Islands National Park since 1988 and is now a joint NPS and NOAA collaboration. Reef fish monitoring data collected from 1988 to 2006 within Virgin Islands National Park (VINP) and adjacent reefs around St. John, U.S. Virgin Islands (USVI) were analyzed to provide information on the status of reef fishes during the monitoring period. Monitoring projects were initiated by the National Park Service (NPS) in the 1980s to provide useful data for evaluation of resources and for development of a long-term monitoring program. Monthly monitoring was conducted at two reef sites (Yawzi Point and Cocoloba Cay) starting in November 1988 for 2.5 years to document the monthly/seasonal variability in reef fish assemblages. Hurricane Hugo (a powerful Category 4 storm) struck the USVI in September 1989 resulting in considerable damage to the reefs around St. John. Abundance of fishes was lower at both sites following the storm, however, a greater effect was observed at Yawzi Point, which experienced a more direct impact from the hurricane. The storm affected species differently, with some showing only small, short-term declines in abundance, and others, such as the numerically abundant blue chromis (Chromis cyanea), a planktivorous damselfish, exhibiting a larger and longer recovery period. This report provides: 1) an evaluation of sampling methods, sample size, and methods used during the sampling period, 2) an evaluation of the spatial and temporal variability in reef fish assemblages at selected reef sites inside and outside of VINP, and 3) an evaluation of trends over 17 years of monitoring at the four reference sites. Comparisons of methods were conducted to standardize assessments among years. Several methods were used to evaluate sample size requirements for reef fish monitoring and the results provided a statistically robust justification for sample allocation.

Fish lost at sea: the effect of soak time on pelagic longline catches

Our analyses of observer records reveal that abundance estimates are strongly influenced by the timing of longline operations in relation to dawn and dusk and soak time— the amount of time that baited hooks are available in the water. Catch data will underestimate the total mortality of several species because hooked animals are “lost at sea.” They fall off, are removed, or escape from the hook before the longline is retrieved. For example, longline segments with soak times of 20 hours were retrieved with fewer skipjack tuna and seabirds than segments with soak times of 5 hours. The mortality of some seabird species is up to 45% higher than previously estimated. The effects of soak time and timing vary considerably between species. Soak time and exposure to dusk periods have strong positive effects on the catch rates of many species. In particular, the catch rates of most shark and billfish species increase with soak time. At the end of longline retrieval, for example, expected catch rates for broadbill swordfish are four times those at the beginning of retrieval. Survival of the animal while it is hooked on the longline appears to be an important factor determining whether it is eventually brought on board the vessel. Catch rates of species that survive being hooked (e.g. blue shark) increase with soak time. In contrast, skipjack tuna and seabirds are usually dead at the time of retrieval. Their catch rates decline with time, perhaps because scavengers can easily remove hooked animals that are dead. The results of our study have important implications for fishery management and assessments that rely on longline catch data. A reduction in soak time since longlining commenced in the 1950s has introduced a systematic bias in estimates of mortality levels and abundance. The abundance of species like seabirds has been over-estimated in recent years. Simple modifications to procedures for data collection, such as recording the number of hooks retrieved without baits, would greatly improve mortality estimates.

Growth, recruitment, and abundance of juvenile striped mullet (Mugil cephalus) in South Carolina estuaries

Growth, recruitment, and abundance of young-of-the-year (YOY) striped mullet (Mugil cephalus L.) in estuarine habitats in South Carolina from 1998 to 2000 were examined and compared to historical data (1986–91) of growth, recruitment, and abundance. Daily growth increments from the sagittal otoliths of juvenile striped mullet were validated by using fish immersed in oxytetracycline hydrochloride (OTC) for five hours from the Charleston Harbor Estuary system. The distribution of back-calculated birthdates indicated that striped mullet spawn from October to late April and estuarine recruitment occurs from January through May. Juveniles were more abundant in mesohaline and polyhaline salinity regimes but were found throughout the estuary. Juvenile growth after recruitment into the estuary can be described by the relationship Total length (mm) = 0.341 (Age)1.04 (r2=0.741, P=0.001). Growth of juveniles according to the analysis of size-frequency data from historical surveys (1986 to 1991) in the same estuaries gave the relationship Total length (mm) = 8.77 (month)1.12 (r2=0.950, P=0.001). The similarity in the growth curves for both groups of fish suggests that juvenile striped mullet in South Carolina have consistent annual growth during the first year of life.

The statistical properties of recreational catch rate data for some fish stocks off the northeast U.S. coast

Recreational fisheries in the waters off the northeast U.S. target a variety of pelagic and demersal fish species, and catch and effort data sampled from recreational fisheries are a critical component of the information used in resource evaluation and management. Standardized indices of stock abundance developed from recreational fishery catch rates are routinely used in stock assessments. The statistical properties of both simulated and empirical recreational fishery catch-rate data such as those collected by the National Marine Fisheries Service (NMFS) Marine Recreational Fishery Statistics Survey (MRFSS) are examined, and the potential effects of different assumptions about the error structure of the catch-rate frequency distributions in computing indices of stock abundance are evaluated. Recreational fishery catch distributions sampled by the MRFSS are highly contagious and overdispersed in relation to the normal distribution and are generally best characterized by the Poisson or negative binomial distributions. The modeling of both the simulated and empirical MRFSS catch rates indicates that one may draw erroneous conclusions about stock trends by assuming the wrong error distribution in procedures used to developed standardized indices of stock abundance. The results demonstrate the importance of considering not only the overall model fit and significance of classification effects, but also the possible effects of model misspecification, when determining the most appropriate model construction.

Larval abundance, distribution, and spawning habits of spotted seatrout (Cynoscion nebulosus) in Florida Bay, Everglades National Park, Florida

The spotted seatrout (Cynoscion nebulosus) is one of the most sought after recreational fish in Florida Bay, and it spends its entire life history within the bay (Rutherford et al.,1989b). The biology of adult spotted seatrout in Florida Bay is well known (Rutherford et al., 1982, 1989b) as is the distribution and abundance of juveniles within the bay. The habitats and diets of juveniles are well documented (Hettler, 1989; Chester and Thayer, 1990; Thayer et al., 1999; Florida Department of Environmental Protection1). Nevertheless, the spatial and temporal spawning habits of spotted seatrout and the distribution of larvae have only been partially described (Powell et al., 1989; Rutherford et al., 1989a).

Does the size of subsamples taken from multispecies trawl catches affect estimates of catch composition and abundance?

Although subsampling is a common method for describing the composition of large and diverse trawl catches, the accuracy of these techniques is often unknown. We determined the sampling errors generated from estimating the percentage of the total number of species recorded in catches, as well as the abundance of each species, at each increase in the proportion of the sorted catch. We completely partitioned twenty prawn trawl catches from tropical northern Australia into subsamples of about 10 kg each. All subsamples were then sorted, and species numbers recorded. Catch weights ranged from 71 to 445 kg, and the number of fish species in trawls ranged from 60 to 138, and invertebrate species from 18 to 63. Almost 70% of the species recorded in catches were “rare” in subsamples (less than one individual per 10 kg subsample or less than one in every 389 individuals). A matrix was used to show the increase in the total number of species that were recorded in each catch as the percentage of the sorted catch increased. Simulation modelling showed that sorting small subsamples (about 10% of catch weights) identified about 50% of the total number of species caught in a trawl. Larger subsamples (50% of catch weight on average) identified about 80% of the total species caught in a trawl. The accuracy of estimating the abundance of each species also increased with increasing subsample size. For the “rare” species, sampling error was around 80% after sorting 10% of catch weight and was just less than 50% after 40% of catch weight had been sorted. For the “abundant” species (five or more individuals per 10 kg subsample or five or more in every 389 individuals), sampling error was around 25% after sorting 10% of catch weight, but was reduced to around 10% after 40% of catch weight had been sorted.

Severe decline in abundance of the red porgy (Pagrus pagrus) population off the southeastern United States

Status of the southeastern U.S. stock of red porgy (Pagrus pagrus) was estimated from fishery-dependent and fishery-independent data, 1972–97. Annual population numbers and fishing mortality rates at age were estimated from virtual population analysis (VPA) calibrated with fishery-independent data. For the VPA, a primary matrix of catch at age was based on age-length keys from fishery-independent samples; an alternate matrix was based on fishery-dependent keys. Additional estimates of stock status were obtained from a surplus-production model, also calibrated with fishery-independent indices of abundance. Results describe a dramatic increase in exploitation of this stock and concomitant decline in abundance. Estimated fully recruited fishing mortality rate (F) from the primary catch matrix increased from 0.10/yr in 1975 to 0.88/yr in 1997, and estimated static spawning potential ratio (SPR) declined from about 67% to about 18%. Estimated recruitment to age 1 declined from a peak of 3.0 million fish in 1973–74 to 94,000 fish in 1997, a decline of 96.9%. Estimated spawning-stock biomass declined from a peak of 3530 t in 1979 to 397 t in 1997, a decline of 88.8%. Results from the alternate catch matrix were similar. Retrospective patterns in the VPA suggest that the future estimates of this population decline will be severe, but may be less than present estimates. Long-term and marked declines in recruitment, spawning stock, and catch per unit of effort (both fishery-derived and fishery-independent)are consistent with severe overexploitation during a period of reduced recruitment. Although F prior to 1995 has generally been estimated at or below the current management criterion for overfishing (F equivalent to SPR=35%), the recent spawning-stock biomass is well below the biomass that could support maximum sustainable yield. Significant reductions in fishing mortality will be needed for rebuilding the southeastern U.S. stock.

A nearsurface, daytime occurrence of two mesopelagic fish species (Stenobrachius leucopsarus and Leuroglossus schmidti) in a glacial fjord

The northern lampfish (Stenobrachius leucopsarus, family Myctophidae) and northern smoothtongue (Leuroglossus schmidti, family Bathylagidae) are mesopelagic fishes, defined by their vertical distribution in the mesopelagic zone (200–1000 m) during daylight hours. Northern lampfish range from the Bering Sea to southern California (Shimada, 1948), where their abundance is highest along the continental slope and decreases over the continental shelf. They are the most abundant species in the mesopelagic zone of the Bering Sea (Pearcy et al., 1977; Sobolevsky et al., 1996), the Gulf of Alaska (Purcell, 1996), and the eastern North Pacific Ocean off Oregon (Pearcy, 1964; Pearcy et al., 1977). Northern smoothtongue also concentrate in areas bordering the continental slope and are widely distributed from southern British Columbia to the Bering Sea (Peden, 1981) and are very abundant in the Okhotsk Sea (Sobolevsky et al., 1996).

Variability in the distribution of planktonic fish eggs and larvae in the nearshore waters off Bombay

Distribution of planktonic fish eggs and larvae in the nearshore waters off Bombay was studied during November 1979 to December 1980. Monthly samples were collected along three transects (Versova, Mahim and Thana) covering eleven stations which represented different environmental conditions. Fish eggs and larvae were common in the area of study with maximum abundance in December 1979 and April/August 1980. Mean density of fish eggs was maximum along the Mahim transect while population of larvae was more in the Versova transect. Total number of families of fish larvae represented in the collections increased from nearshore to offshore area.

Fish catch composition in relation to some hydrographic observations along the Bombay Ratnagiri coast

Hydrographic parameters in relation to fish catch composition within the depth range of 30 m to 97 m at 15 different stations off the Bombay to Ratnagiri coast were studied from onboard the vessel M.V. Saraswathi, a 36.5 meter deepsea going research-cum-training vessel during her 58th cruise from the 17th to the 27th December 1986. The study indicates the abundance of Trichiurus sp, Priacanthus sp and Arius sp. Fluctuations in the zooplankton biomass and faunistic composition in the area are examined in relation to some important hydrographic parameters.

Relative abundance and diel variation of zooplankton from south west coast of India

Relative abundance and diurnal variations of zooplankton from six anchor stations along Kerala coast were investigated. Samples were collected during April-May 1988 at three hour intervals from depths varying between 15 and 40 m from the traditional fishing grounds of Kerala coast. Average biomass values ranged from 45-95 ml 100/mˉ³. Increase in zooplankton at night was discernible at most of the stations and the highest biomass noticed was 131 ml 100/mˉ³. Copepods formed the most abundant group, of which calanoids predominated. A swarm of the hydromedusan species, Aequorea conica, (181/mˉ³) was seen at night. Quantitative and qualitative variations of various zooplankton groups from six stations in relation to selected physicochemical factors are discussed. Maximum fish larvae were observed in the night samples. Relatively high abundance of sardines, carangids and flat fish larvae in the collections is in agreement with the predominance of fish catch from the area of study.

Development of a new model of feeding strategy analysis of fish incorporating resource availability and use data

A feeding strategy model is proposed using stomach content and resource availability data as a modification to Costello (1990) and Amundsen et al. (1996). Incorporation of feeding electivity index (E) instead of the prey-specific abundance signifies the importance of resource availability in prey selection as well as the predator's ability to specialize, generalize or avoid particular prey items at the individual and population level.

A Preliminary survey of 21 Ceylon lakes. 3. Parasites and predators, food of fish, and marginal fauna

Three nematodes, two acanthocephalans and three cestodes were collected by dissecting 15 species of fish. Of these parasites only Hedruris sp. a larval nematode is responsible directly for the death of fish, since it is found in predatory species a reduction of these might prove of considerable consequence to fish, production. Bothriocephalus gowleonensis, a cestode probably introduced from China with Chinese carp, was recorded in an indigenous carp Puntius sarana. This parasite causes heavy mortality in grass carp in China and is a potential danger to local species. A single crustacean parasite was recorded. It is likely that they are widespread. No protozoa were recorded but there can be little doubt that they occur in local freshwater species and may be of considerable importance in fisheries. Several predators (insects, fish and other vertebrates) were recorded and are doubtless of considerable importance. However, the role of parasites and of predators (especially fishes) in relation to the productivity of fisheries can hardly be assessed at present and needs further study. A study of the fauna found at the shallow edges of 21 irrigation reservoirs showed an abundance of fauna in the low-country reservoirs whilst the up-country reservoirs had a poor fauna. The fauna showed insects, crustacea and mollusca in this order of abundance. The presence of insect and molluscs feeding fish in our fauna shows that these rich sources of food are being utilised.

Status of the gill net fishery for the small pelagic fish species in western, south-western and southern coastal waters of Sri Lanka during 1995-1997

Small pelagic fish species are mainly caught by gill nets operated by fibre reinforced plastic boats fitted with 8-25hp out board engines, traditional crafts fitted with 8-1hp out board engines and non mechanised traditional crafts. Around 28 to 55% of the small pelagic catch in the study area consisted of trenched sardine Amblygaster sirm during 1995-1997 period. Another 26-36% of the catch composed of other Sardinella species such as Sardinella gibbosa, S. albella, S. sindensis and S. longiceps. Engraulids such as Encrasicholina heteroloba, Stolephorus insularis and Stolephorus indicus and Thryssa spp formed around 3-5% of the catch. The major component of this fishery consisted of Clupeids and Engrauhds and over 65 species ranged between smaller Engraulids to incidental rock fish, sail fish, seer fish, sharks, skates and rays. Around 1.4 to 1.9% of the catch consisted of Chirocentrus dorab, Sphyraenaspp, Scomberomorus spp, Lepturcanthus sp and Megalaspis cordyla. Around 1-11% of the catch consisted of incidentally catches of sharks, rays, skates and sail fish. Another 1.6 to 6% of the catch consisted of Selar crumenophthalamus and Rastrelliger kanagurta. The best fishing season appeared to be from June to October in the west coast and August to December in the south coast. The major components of Amblygaster sirm, Sardinella albella and Sardinella gibbosa were caught within the size ranges of 10.0-22.5 cm, 11.0-13.0 cm and 11.0-15.0 cm respectively. However, smaller sized fish of above species of sizes between 6.9 cm to 9.7 cm total length were incidentally caught in the gill nets operated for small Engraulids with a stretched mesh size of 1.6cm. The overall catch rate for the major fish landing centre at Negombo indicated an increase from 38.5 kg/boat trip during 1984-1990 period to 49.5 kg/boat trip during 1995-1997 period. The catch rate for the dominant species Amblygaster sirm has decreased from 28.17 kg/boat trip during 1983-1990 period to 17.47 kg/boat trip during 1995-1997 period at Negombo. The paper also discusses the changing overall catch rates, change in species abundance and possible management consequences that should be considered.