Karyotype and NOR conservatism with heterochromatin reorganization in Neotropical Bryconids

Cytogenetic studies on Bryconid fishes have shown the occurrence of karyotype and NOR conservatism and heterochromatin reorganization. The present data on three species representative of the migratory genus Brycon corroborate the hypothesis according to which conservative patterns of karyotypic evolution can be related to high levels of vagility and large populational size in Neotropical freshwater fishes.

Karyotype studies of some species of Dalechampia plum. (Euphorbiaceae)

Karyotype studies in eight species of Dalechampia, including 10 natural populations, revealed chromosome numbers (2n = 36, 46, 138 and 198) differing from two numbers cited in the literature (2n = 44 and 72). The basic number x = 6, as in the genus Acalypha, may be considered ancestral in Dalechampia. Analysis of Chromosome number, haploid chromosome length and karyotype symmetry suggests that the major chromosome mechanism acting in karyotype evolution of Dalechampia is polyploidy, but differences in chromosome morphology may be caused by chromosome rearrangements.

Karyotype evolution in the Termitidae (Isoptera)

The karyotypes of 15 species of Termitidae were analyzed. All of them are X1X2Y1Y2 (male) and X1X1X2X2 (female). With the exception of Neocapritermes opacus with 2n=40, the remaining species are 2n=42 in both sexes, a karyotype similar to those described for African species by other authors. The sex determining mechanism probably originated before the split up of Gondwanaland, in a single event, early during the karyotype evolution of the family Termitidae by means of a reciprocal translocation that involved the primitive Y and a chromosome from an autosomal pair.

Conserved sequences in the β subunit of archaeal and eukaryal translation initiation factor 2 (elF2), absent from elF5, mediate interaction with elF2γ

The eukaryotic translation initiation factor 2 (eIF2) binds the methionyl-initiator tRNA in a GTP-dependent mode. This complex associates with the 40 S ribosomal particle, which then, with the aid of other factors, binds to the 5' end of the mRNA and migrates to the first AUG codon, where eIF5 promotes GTP hydrolysis, followed by the formation of the 80 S ribosome. Here we provide a comparative sequence analysis of the β subunit of eIF2 and its archaeal counterpart (aIF2β). aIF2β differs from eIF2β in not possessing an N-terminal extension implicated in binding RNA, eIF5 and eIF2B. The remaining sequences are highly conserved, and are shared with eIF5. Previously isolated mutations in the yeast eIF2β, which allow initiation of translation at UUG codons due to the uncovering of an intrinsic GTPase activity in eIF2, involve residues that are conserved in aIF2β, but not in eIF5. We show that the sequence of eIF2B homologous to aIF2β is sufficient for binding eIF2γ, the only subunit with which it interacts, and comprises, at the most, 78 residues, eIF5 does not interact with eIF2γ, despite its similarity with eIF2β, probably because of a gap in homology in this region. These observations have implications for the evolution of the mechanism of translation initiation.

Karyotype variability in eight species of the subfamilies Loricariinae and Ancistrinae (Teleostei, Siluriformes, Loricariidae)

Loricariidae is one of the largest fish families of the world, with about 650 species separated into six subfamilies. To date, cytogenetic data on only 56 species of this family are available. In the present study, the karyotypes of three Ancistrinae species and five Loricariinae species were studied. The lowest diploid number, 2n=38, was observed in Ancistrus n.sp. 1 (Ancistrinae) and the highest diploid number, 2n=70, was observed in Rineloricaria n.sp. (Loricariinae). The nucleolar organizer regions (NORs) were seen at a terminal position in six species and at an interstitial position in two. The karyotypic analysis of Loricariinae and Ancistrinae species revealed that these groups exhibit a large diversity of diploid numbers, suggesting the occurrence of intense karyotypic evolution during their evolutionary history.

A new karyotype of oligoryzomys (sigmodontinae, rodentia) from central Brazil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Description of the nucleolar activity and karyotype in germinative cell lines of Rhodnius domesticus (Triatominae, Heteroptera)

The purpose of this work was to study the karyotype, spermatogenesis and nucleolar activity at meiosis, in the species Rhodnius domesticus (Heteroptera, Triatominae). The testicular tubules were cytologically prepared by the conventional method of cell crushing and subsequent application of cytogenetic staining techniques with lacto-acetic orcein and silver-ion impregnation. The species under study presented karyotype 2n= 20A+XY, the modal number of the subfamily Triatominae. The chromosomes presented no primary constriction and were therefore characterized as holocentric. It was observed that the sex chromosomes sometimes were located at the periphery, close to the ring formed by autosomes, at first meiotic division. At metaphases II, sex chromosomes were positioned in the center of the autosomal ring, thus evidencing a postreductional behavior. These same chromosomes showed late migration at anaphases and were clearly impregnated with silver-ions, suggesting they bore Nucleolar Organizer Regions. Dispersed nucleolar corpuscles in cytoplasm until telophase II and small dots in spermatids strongly impregnated with silver, could be seen. Thus, it may be inferred that, in triatomines, the nucleolus does not completely disappear but remains in the form of small corpuscles that have a role in cell differentiation.

BRST cohomology and nonlocal conserved charges

A relation is found between nonlocal conserved charges in string theory and certain ghost-number two states in the BRST cohomology. This provides a simple proof that the nonlocal conserved charges for the superstring in an AdS 5 × S5 background are BRST-invariant in the pure spinor formalism and are κ-symmetric in the Green-Schwarz formalism. © SISSA/ISAS 2005.

The karyotype of Scoloplax distolothrix (Teleostei: Siluriformes: Scoloplacidae)

The karyotype of a fish species belonging to the family Scoloplacidae, Scoloplax distolothrix, is described for the first time. Cytogenetic studies showed that this species has 2n=50 chromosomes, 18 metacentrics, 18 submetacentrics, 10 subtelocentrics and 4 acrocentrics. The Ag-NORs are restricted to a single large metacentric pair in the interstitial position on the long arm. © 2006 The Japan Mendel Society.

Invariant conserved currents in gravity theories with local Lorentz and diffeomorphism symmetry

We discuss conservation laws for gravity theories invariant under general coordinate and local Lorentz transformations. We demonstrate the possibility to formulate these conservation laws in many covariant and noncovariant(ly looking) ways. An interesting mathematical fact underlies such a diversity: there is a certain ambiguity in a definition of the (Lorentz-) covariant generalization of the usual Lie derivative. Using this freedom, we develop a general approach to the construction of invariant conserved currents generated by an arbitrary vector field on the spacetime. This is done in any dimension, for any Lagrangian of the gravitational field and of a (minimally or nonminimally) coupled matter field. A development of the regularization via relocalization scheme is used to obtain finite conserved quantities for asymptotically nonflat solutions. We illustrate how our formalism works by some explicit examples. © 2006 The American Physical Society.

Chromosomal characteristics and karyotype evolution of oxyopidae spiders (araneae, entelegynae)

We made a cytogenetic analysis of four species of Oxyopidae and compared it with the karyotype data of all species of this family. In Hamataliwa sp, the mitotic cells showed 2n♂ = 26+X 1X 2 and telocentric chromosomes. The 2n♂ = 28, which has been described for only one oxyopid spider, is the highest diploid number reported for this family. Peucetia species exhibited distinct karyotype characteristics, i.e., 2n♂ = 20+X 1X 2 in P. flava and 2n♂ = 20+X in P. rubrolineata, revealing interspecific chromosome variability within this genus. However, both Peucetia species exhibited telocentric chromosomes. The most unexpected karyotype was encountered in Oxyopes salticus, which presented 2n♂ = 10+X in most individuals and a predominance of biarmed chromosomes. Additionally, one male of the sample of O. salticus was heterozygous for a centric fusion that originated the first chromosomal pair and exhibited one supernumerary chromosome in some cells. Testicular nuclei of Hamataliwa sp and O. salticus revealed NORs on autosomal pairs, after silver impregnation. The majority of Oxyopidae spiders have their karyotype differentiated by both reduction in diploid number chromosome number and change of the sex chromosome system to X type; however, certain species retain the ancestral chromosome constitution 2n = 26+X1X2. The most remarkable karyotype differentiation occurred in O. salticus studied here, which showed the lowest diploid number ever observed in Oxyopidae and the second lowest registered for Entelegynae spiders. © FUNPEC-RP www.funpecrp.com.br.

Gene Content Analysis of Sugarcane Public ESTs Reveals Thousands of Missing Coding-Genes and an Unexpected Pool of Grasses Conserved ncRNAs

Sugarcane is the most important crop for sugar industry and raw material for bioethanol. Here we present a quantitative analysis of the gene content from publicly available sugarcane ESTs. The current sugarcane EST collection sampled orthologs for ~58 % of the closely-related sorghum proteome, suggesting that more than 10,000 sugarcane coding-genes remain undiscovered. Moreover the existence of more than 2,000 ncRNAs conserved between sugarcane and sorghum was revealed, among which over 500 are also detected in rice, supporting the existence of hundreds of conserved ncRNAs in grasses. New efforts towards sugarcane transcriptome sequencing were needed to sample the missing coding-genes as well as to expand the catalog of ncRNAs. © 2012 Springer Science+Business Media, LLC.

Karyotype analysis of seven species of the tribe lophiohylini (Hylinae, Hylidae, Anura), with conventional and molecular cytogenetic techniques

Few species of the tribe Lophiohylini have been karyotyped so far, and earlier analyses were performed mainly with standard staining. Based on the analysis of seven species with use of routine banding and molecular cytogenetic techniques, the karyotypes were compared and the cytogenetic data were evaluated in the light of the current phylogenies. A karyotype with 2n = 24 and NOR in the chromosome 10 detected by Ag-impregnation and FISH with an rDNA probe was shared by Aparasphenodon bokermanni Miranda-Ribeiro, 1920, Itapotihyla langsdorffii (Duméril and Bibron, 1841), Trachycephalus sp., T. mesophaeus (Hensel, 1867), and T. typhonius (Linnaeus, 1758). Phyllodytes edelmoi Peixoto, Caramaschi et Freire, 2003 and P. luteolus (Wied-Neuwied, 1824) had reduced the diploid number from 2n = 24 to 2n = 22 with one of the small-sized pairs clearly missing, and NOR in the large chromosome 2, but the karyotypes were distinct regarding the morphology of chromosome pairs 4 and 6. Based on the cytogenetic and phylogenetic data, it was presumed that the chromosome evolution occurred from an ancestral type with 2n = 24, in which a small chromosome had been translocated to one or more unidentified chromosomes. Whichever hypothesis is more probable, other rearrangements should have occurred later, to explain the karyotype differences between the two species of Phyllodytes Wagler, 1830. The majority of the species presented a small amount of centromeric C-banded heterochromatin and these regions were GC-rich. The FISH technique using a telomeric probe identified the chromosome ends and possibly (TTAGGG)n-like sequences in the repetitive DNA out of the telomeres in I. langsdorffii and P. edelmoi. The data herein obtained represent an important contribution for characterizing the karyotype variability within the tribe Lophiohylini scarcely analysed so far. © Simone Lilian Gruber et al.