Ogasawara winter Sr/Ca and U/Ca data of coral core OGA-02-1 and PDO reconstruction (coral-geoduck index)

The Pacific Decadal Oscillation (PDO), the leading mode of sea surface temperature (SST) anomalies in the extratropical North Pacific Ocean, has widespread impacts on precipitation in the Americas and marine fisheries in the North Pacific. However, marine proxy records with a temporal resolution that resolves interannual to interdecadal SST variability in the extratropical North Pacific are extremely rare. Here we demonstrate that the winter Sr/Ca and U/Ca records of an annually-banded reef coral from the Ogasawara Islands in the western subtropical North Pacific are significantly correlated with the instrumental winter PDO index over the last century. The reconstruction of the PDO is further improved by combining the coral data with an existing eastern mid-latitude North Pacific growth ring record of geoduck clams. The spatial correlations of this combined index with global climate fields suggest that SST proxy records from these locations provide potential for PDO reconstructions further back in time.

Giant clams and rising CO2: light may ameliorate effects of ocean acidification on a solar-powered animal

Global climate change and ocean acidification pose a serious threat to marine life. Marine invertebrates are particularly susceptible to ocean acidification, especially highly calcareous taxa such as molluscs, echinoderms and corals. The largest of all bivalve molluscs, giant clams, are already threatened by a variety of local pressures, including overharvesting, and are in decline worldwide. Several giant clam species are listed as 'Vulnerable' on the IUCN Red List of Threatened Species and now climate change and ocean acidification pose an additional threat to their conservation. Unlike most other molluscs, giant clams are 'solar-powered' animals containing photosynthetic algal symbionts suggesting that light could influence the effects of ocean acidification on these vulnerable animals. In this study, juvenile fluted giant clams Tridacna squamosa were exposed to three levels of carbon dioxide (CO2) (control ~400, mid ~650 and high ~950 µatm) and light (photosynthetically active radiation 35, 65 and 304 µmol photons/m**2/s). Elevated CO2 projected for the end of this century (~650 and ~950 µatm) reduced giant clam survival and growth at mid-light levels. However, effects of CO2 on survival were absent at high-light, with 100% survival across all CO2 levels. Effects of CO2 on growth of surviving clams were lessened, but not removed, at high-light levels. Shell growth and total animal mass gain were still reduced at high-CO2. This study demonstrates the potential for light to alleviate effects of ocean acidification on survival and growth in a threatened calcareous marine invertebrate. Managing water quality (e.g. turbidity and sedimentation) in coastal areas to maintain water clarity may help ameliorate some negative effects of ocean acidification on giant clams and potentially other solar-powered calcifiers, such as hard corals.

Does seawater acidification affect survival, growth and shell integrity in bivalve juveniles?

Anthropogenic emissions of carbon dioxide are leading to decreases in pH and changes in the carbonate chemistry of seawater. Ocean acidification may negatively affect the ability of marine organisms to produce calcareous structures while also influencing their physiological responses and growth. The aim of this study was to evaluate the effects of reduced pH on the survival, growth and shell integrity of juveniles of two marine bivalves from the Northern Adriatic sea: the Mediterranean mussel Mytilus galloprovincialis and the striped venus clam Chamelea gallina. An outdoor flow-through plant was set up and two pH levels (natural seawater pH as a control, pH 7.4 as the treatment) were tested in long-term experiments. Mortality was low throughout the first experiment for both mussels and clams, but a significant increase, which was sensibly higher in clams, was observed at the end of the experiment (6 months). Significant decreases in the live weight (-26%) and, surprisingly, in the shell length (-5%) were observed in treated clams, but not in mussels. In the controls of both species, no shell damage was ever recorded; in the treated mussels and clams, damage proceeded via different modes and to different extents. The severity of shell injuries was maximal in the mussels after just 3 months of exposure to a reduced pH, whereas it progressively increased in clams until the end of the experiment. In shells of both species, the damaged area increased throughout the experiment, peaking at 35% in mussels and 11% in clams. The shell thickness of the treated and control animals significantly decreased after 3 months in clams and after 6 months in mussels. In the second experiment (3 months), only juvenile mussels were exposed to a reduced pH. After 3 months, the mussels at a natural pH level or pH 7.4 did not differ in their survival, shell length or live weight. Conversely, shell damage was clearly visible in the treated mussels from the 1st month onward. Monitoring the chemistry of seawater carbonates always showed aragonite undersaturation at 7.4 pH, whereas calcite undersaturation occurred in only 37% of the measurements. The present study highlighted the contrasting effects of acidification in two bivalve species living in the same region, although not exactly in the same habitat.

Mineralogy of cold seep sediment inhabited by vesicomyid clams in the Japan Deep Sea Trench

Sediment sampling was performed at the center of the clam colony. Immediately after sample recovery onboard, the sediment core was sub-sampled and preserved for later analyses. Pyrite and carbonate content of the sediment was measured by X-ray refraction analysis as previously described (Ertefai et al., 2010).

E2-C, a cyclin-selective ubiquitin carrier protein required for the destruction of mitotic cyclins.

Ubiquitin-dependent proteolysis of the mitotic cyclins A and B is required for the completion of mitosis and entry into the next cell cycle. This process is catalyzed by the cyclosome, an approximately 22S particle that contains a cyclin-selective ubiquitin ligase activity, E3-C, that requires a cyclin-selective ubiquitin carrier protein (UBC) E2-C. Here we report the purification and cloning of E2-C from clam oocytes. The deduced amino acid sequence of E2-C indicates that it is a new UBC family member. Bacterially expressed recombinant E2-C is active in in vitro cyclin ubiquitination assays, where it exhibits the same substrate specificities seen with native E2-C. These results demonstrate that E2-C is not a homolog of UBC4 or UBC9, proteins previously suggested to be involved in cyclin ubiquitination, but is a new UBC family member with unique properties.

Reversible phosphorylation controls the activity of cyclosome-associated cyclin-ubiquitin ligase.

Cyclin B/cdc2 is responsible both for driving cells into mitosis and for activating the ubiquitin-dependent degradation of mitotic cyclins near the end of mitosis, an event required for the completion of mitosis and entry into interphase of the next cell cycle. Previous work with cell-free extracts of rapidly dividing clam embryos has identified two specific components required for the ubiquitination of mitotic cyclins: E2-C, a cyclin-selective ubiquitin carrier protein that is constitutively active during the cell cycle, and E3-C, a cyclin-selective ubiquitin ligase that purifies as part of a approximately 1500-kDa complex, termed the cyclosome, and which is active only near the end of mitosis. Here, we have separated the cyclosome from its ultimate upstream activator, cdc2. The mitotic, active form of the cyclosome can be inactivated by incubation with a partially purified, endogenous okadaic acid-sensitive phosphatase; addition of cdc2 restores activity to the cyclosome after a lag that reproduces that seen previously in intact cells and in crude extracts. These results demonstrate that activity of cyclin-ubiquitin ligase is controlled by reversible phosphorylation of the cyclosome complex.

Aplicación teórica del árbol de evaluación del Marine Stewardship Council, como herramienta de gestión de pesca sostenible, a la pesquería de la chirla, Chamelea gallina (Linnaeus, 1758), con draga hidráulica en el Golfo de Cádiz

La etiqueta azul del Marine Stewardship Council, pesca sostenible certificada, indica que un producto de pescado, fresco o transformado, procede de un recurso natural, salvaje, gestionado de manera respetuosa con el medio. Para obtenerla es necesario cumplir una serie de requisitos que son evaluados por una empresa certificadora (a la cual MSC ha dado el visto bueno y que es, a su vez, evaluada por otro organismo que asegura su completa imparcialidad). MSC presenta un modo de gestionar pesquerías que, según la propia organización, asegura la continuidad de la especie objetivo, de otras especies dependientes de ésta y del medio donde habitan. Sin embargo, obtener dicha eco-etiqueta azul es complejo y, sobre todo, económicamente difícil. El objetivo de este artículo es comprobar si el enfoque ecosistémico de este estándar ayudaría a paliar el impacto negativo de una pesquería que es fuente de riqueza, alimento y empleo perdurable en el Golfo de Cádiz. Es decir, aplicar los principios y criterios de MSC como herramienta de gestión de la pesquería de la chirla, Chamelea gallina (Linnaeus, 1758), con draga hidráulica.

Shell-based chronologies for the Irish Sea

We demonstrate here that the growth increment variability in the shell of the long-lived bivalve mollusc Arctica islandica can be interpreted as an indicator of marine environmental change in the climatically important North Atlantic shelf seas. Multi-centennial (up to 489-year) chronologies were constructed using five detrending techniques and their characteristics compared. The strength of the common environmental signal expressed in the chronologies was found to be fully comparable with equivalent statistics for tree-ring chronologies. The negative exponential function using truncated increment-width series from which the first thirty years have been removed was chosen as the optimal detrending technique. Chronology indices were compared with the Central England Temperature record and with seawater temperature records from stations close to the study site in the Irish Sea. Statistically significant correlations were found between the chronology indices and (a) mean air temperature for the 14-month period beginning in the January preceding the year of growth, (b) mean seawater temperatures for February-October in the year preceding the year of growth (c) late summer and autumn air temperatures and sea surface temperatures for the year of growth and (d) the timing of the autumn decline in SST. Changes through time in the correlations with air and seawater temperatures and changes towards a deeper water origin for the shells in the chronology were interpreted as an indication that shell growth may respond to stratification dynamics.

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Effects of engineering activities on the ecology of Pismo clams /

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