Calcareous nannofossil stratigraphy of ODP Holes 173-1065A and 173-1069A

Upper Jurassic calcareous nannofossil assemblages have been studied from strata cored over basement blocks now buried under the Iberia Abyssal Plain (Ocean Drilling Program Leg 173 Sites 1065 and 1069). The youngest Jurassic assemblages at each site are Tithonian in age, the same as those at nearby Leg 149 Site 901, an age that predates the breakup of the Iberia continental margin. The paucity of the assemblages, the prevalence of coccospheres, and the relatively high organic contents of the fine clastic sediments in which they occur are characteristic of a restricted interior basin that had little communication with the open ocean. During the major rifting episode (a Berriasian event), the Jurassic sequences were dispersed along with their underlying blocks of presumed continental crust across the ocean-continent transition of the Iberia Abyssal Plain, probably as a result of detachment faulting.

Shifts in the microbial community structure in different temperatures during sample storage from IODP Hole 325-M0058A

The objective of this study was to determine shifts in the microbial community structure and potential function based on standard Integrated Ocean Drilling Program (IODP) storage procedures for sediment cores. Standard long-term storage protocols maintain sediment temperature at 4°C for mineralogy, geochemical, and/or geotechnical analysis whereas standard microbiological sampling immediately preserves sediments at -80°C. Storage at 4°C does not take into account populations may remain active over geologic time scales at temperatures similar to storage conditions. Identification of active populations within the stored core would suggest geochemical and geophysical conditions within the core change over time. To test this potential, the metabolically active fraction of the total microbial community was characterized from IODP Expedition 325 Great Barrier Reef sediment cores prior to and following a 3-month storage period. Total RNA was extracted from complementary 2, 20, and 40 m below sea floor sediment samples, reverse transcribed to complementary DNA and then sequenced using 454 FLX sequencing technology, yielding over 14,800 sequences from the six samples. Interestingly, 97.3% of the sequences detected were associated with lineages that changed in detection frequency during the storage period including key biogeochemically relevant lineages associated with nitrogen, iron, and sulfur cycling. These lineages have the potential to permanently alter the physical and chemical characteristics of the sediment promoting misleading conclusions about the in situ biogeochemical environment. In addition, the detection of new lineages after storage increases the potential for a wider range of viable lineages within the subsurface that may be underestimated during standard community characterizations.

Niche differentiation among mat-forming, sulfide-oxidizing bacteria in chemosynthetic ecosystems of the Nile Deep Sea Fan (Eastern Mediterranean Sea)

Sulfidic muds of cold seeps on the Nile Deep Sea Fan are populated by different types of mat-forming sulfide-oxidizing bacteria. The predominant sulfide oxidizers of three different mats were identified by microscopic and phylogenetic analyses as (i) Arcobacter species producing cotton-ball-like sulfur precipitates, (ii) large filamentous sulfur bacteria including Beggiatoa species, or (iii) single, spherical cells resembling Thiomargarita species. High resolution in situ microprofiles revealed different geochemical settings selecting for different mat types. Arcobacter mats occurred where oxygen and sulfide overlapped at the bottom water interface. Filamentous sulfide oxidizers were associated with non-overlapping, steep gradients of oxygen and sulfide. A dense population of Thiomargarita was favored by temporarily changing supplies of oxygen and sulfide. These results indicate that the decisive factors in selecting for different mat-forming bacteria within one deep-sea province are spatial or temporal variations in energy supply. Furthermore, the occurrence of Arcobacter spp.-related 16S rRNA genes in the sediments below all three types of mats, as well as on top of brine lakes of the Nile Deep Sea Fan, indicates that this group of sulfide oxidizers can switch between different life modes depending on the geobiochemical habitat setting.

Gel particles in the sea-surface microlayer during an experimental study

Since the early 80's, the sea-surface microlayer (SML) has been hypothesized as being a gelatinous film. Recent studies have confirmed this characteristic, which confers properties that mediate mass and energy fluxes between ocean and atmosphere, including the emission of primary organic aerosols from marine systems. We investigated SML thickness and composition in five replicate indoor experiments between September and December 2010. During each experiment, the SML and underlying seawater were sampled from four seawater tanks: one served as control, and three were inoculated with Thalassiosira weissflogii grown in chemostats at 180, 380 and 780 ppm pCO2. We examined organic material enrichment factors in each tank, paying particular attention to gel particles accumulation such as polysaccharidic Transparent Exopolymer Particles (TEP) and the proteinaceous Coomassie Stainable Particles (CSP). While previous studies have observed carbohydrates and TEP enrichment in the microlayer, little is yet known about proteinaceous gel particles in the SML. Our experiments show that CSP dominate the gelatinous composition of the SML. We believe that the enrichment in CSP points to the importance of bacterial activity in the microlayer. Bacteria may play a pivotal role in mediating processes at the air-sea interface thanks to their exudates and protein content that can be released through cell disruption.

Cretaceous calcareous nannofossils from Exmouth and Wombat Plateau, Northwest Australia

Three sites drilled during Leg 122, Site 761 on the Wombat Plateau and Sites 762 and 763 on the Exmouth Plateau, provide a composite Cretaceous section ranging in age from Berriasian to Maestrichtian. Together, these sites contain an apparently complete, expanded Aptian-Maestrichtian record. Consistently occurring and moderately well-preserved nannofossil assemblages allow reasonably high biostratigraphic resolution. Our data indicate that traditional middle and Upper Cretaceous nannofossil biozonations are not entirely applicable in this region. In this investigation, we compare in detail the relative ranges of key Cretaceous nannofossil markers in the eastern Indian Ocean and in sections from Europe and North Africa. We have determined which previously used events are applicable, and which additional markers have biostratigraphic utility in this region. Significant differences in Campanian-Maestrichtian assemblages exist between the more northern Site 761 and Sites 762 and 763. Such differences are surprising, considering that these sites are only separated by 3° of latitude. We interpret them as marking a strong thermal gradient over the Exmouth Plateau region. Other results include the recovery of an expanded Albian-Cenomanian sequence containing a mixture of Austral and Tethyan floras, which will enable correlation of biozonations established for these two realms; the recovery of two condensed but apparently complete Cenomanian-Turonian boundary sections; correlation of Upper Cretaceous calcareous nannofossil biostratigraphy with magneto- and foraminifer stratigraphy; and correlation of portions of the Barrow Group equivalents to the Berriasian and Valanginian stages.

Calcareous nannofossil biostratigraphy of ODP Leg 108 sediments

Calcareous nannofossils were examined from the 400 cores recovered at 12 sites during Ocean Drilling Program Leg 108 in the eastern equatorial Atlantic Ocean and along the northwest African margin, representing a transect spanning 24° of latitude. Thirty calcareous nannofossil biohorizons were recognized in the Neogene and Quaternary sequences; only Site 661, located in water depths of 3500 m, contains a fossiliferous record older than the Oligocene. At Site 661, a 200-m-thick sequence of Upper Cretaceous sediments yielded Maestrichtian and uppermost Campanian nannofossils, yet a continuous Cretaceous/Tertiary boundary was not recovered. Widespread sediment slumps and turbidites deposited at many sites interrupted the pelagic sedimentation. A careful study of calcareous nannofossil and foraminifer assemblages correlated to paleomagnetic records suggests that "slumped" units at most sites were added as extra sediments to rapidly deposited pelagic sediments, with minor disturbance of the surrounding layers. Nannofossils are generally common to abundant and moderately preserved at all sites except for those located in two upwelling areas, where placoliths are etched and discoasters overgrown. Typical low-latitudinal zonal markers were used during this study, yet some of them were considered to be of little biostratigraphic value because of their inconsistent stratigraphic ranges and low abundances. This is especially apparent for the intervals representing the Miocene/Pliocene and Oligocene/Miocene boundaries. Characteristic nannofossils of cool-water conditions and low discoaster abundances occur at the coastal African upwelling and along the south equatorial divergence sites, signifying a stronger advection of cold waters toward the equator within the Canary and Benguela eastern boundary currents.

Abundance, Electron transport System (ETS) activity and respiration rates of pelagic decapods from the Benguela upwelling system during AFR258, D356 and MSM17/3

Decapods were sampled with a 1 m**2 MOCNESS (mainly upper 1000 m) in the northern Benguela Current during three cruises in December 2009, September/October 2010 and February 2011. Although pelagic decapods are abundant members of the micronekton community, information about their ecophysiology is very limited. Species-specific regional distribution limits were detected for various decapod species (e.g. Plesionika carinata, Sergestes arcticus, Pasiphaea semispinosa). Significant diel vertical migration patterns were determined for three caridean and three penaeiodean species. Biomass was variable and ranged from 23 to 2770 mg dry mass m**-2 with highest values for P. semispinosa. Fatty acid and stable isotope analyses revealed that the examined decapod species are omnivorous tocarnivorous except for the herbivorous to omnivorous species P. carinata. Calanid copepods such as Calanoides carinatus were identified as an important prey item especially for caridean species. Community consumption rates of pelagic decapods derived from respiration rates ranged from 7 mg C m**-2 d**-1 (231S) to 420 mg C m**-2 d**-1 (191S, 171S). A potential active respiratory carbon flux was calculated for migrating pelagic decapods with 4.4 mg C m**- d**-1 for the upper 200 m and with 2.6 mg C m**-2 d**-1 from the base of the euphotic zone to a depth of 600 m. Overall, pelagic decapods apparently play a more prominent role in the northern Benguela Current ecosystem than previously assumed and may exert a substantial predation impact on calanid copepods (up to 13% d**-1 of standing stock).

Biogeochemical investigation of cold seep sediments in the Eastern Mediterranean Sea

Cold seep ecosystems are highly productive, fragmented ecosystems of the deep-sea floor. They form worldwide where methane reaches the surface seafloor, and are characterized by rich chemosynthetic communities fueled by the microbial utilization of hydrocarbons. Here we investigated with in situ (benthic chamber, microprofiler) and ex situ (pore water constituents, turnover rates of sulfate and methane, prokaryote abundance) techniques reduced sites from three different seep ecosystems in the Eastern Mediterranean deep-sea. At all three cold seep systems, the Amon Mud Volcano, Amsterdam Mud Volcano and the Nile Deep Sea Fan Pockmark area, we observed and sampled patches of highly reduced, methane-seeping sulfidic sediments which were separated by tens to hundreds of (kilo)meters with non-reduced oxygenated seafloor areas. All investigated seep sites were characterized by gassy, sulfidic sediments of blackish color, of which some were overgrown with thiotrophic bacterial mats. Fluxes of methane and oxygen, as well as sulfate reduction rates varied between the different sites.

Biostratigraphy of selected taxa and radiolarian events in ODP Hole 183-1138A sediments

Well-preserved radiolarian assemblages of late middle Miocene to early Pliocene age are found in Ocean Drilling Program (ODP) Hole 1138A (Cores 183-1138A-12R to 20R), which was rotary drilled into the Central Kerguelen Plateau. The faunas are typical for Antarctic assemblages of this time interval, and the site appears to have been south of the Polar Front during the time period studied. Despite only moderate drilling recovery of the section, most late middle to early Pliocene radiolarian zones are present, although at the sample resolution used, subzones could not be identified. A significant discontinuity in the section is present at the boundary between lithologic Units I and II (between Cores 183-1138A-12R and 13R), corresponding to an interval from at least 4.6 to 6.1 Ma. Mixed late Miocene-early Pliocene assemblages are seen in the base of Core 183-1138A-12R (Sample 183-1138A-12R-3, 20 cm), and the overlying basal Pliocene Tau Zone appears to be absent. It cannot be determined if the discontinuity is due to incomplete recovery of the section and drilling disturbance or if it reflects a primary sedimentary structure - a hiatus or interval of condensed sedimentation.

Data on multidisciplinary research in the Tajura Rift (Gulf of Aden) during Cruise 7 of R/V Akademik Mstislav Keldysh in winter 1983-1984

In the collective monograph results of geological and geophysical studies in the Tadjura Rift carried out by conventional outboard instruments and from deep/sea manned submersibles "Pisces" in winter 1983-1984 are reported. Main features of rift tectonics, geology, petrology, and geochemistry of basalts from the rift are under consideration. An emphasis is made on lithology, stratigraphy, and geochemistry of bottom sediments. Roles of terrigenous, edafogenic, biogenic, and hydrothermal components in formation of bottom sediments from the rift zone are shown.

Oligocene plaktonic foraminifera of the Indian Ocean ODP Leg 115 sites

We drilled 13 holes on Ocean Drilling Program Leg 115 in the Indian Ocean and recovered Paleogene sediments that consisted primarily of pelagic components. Planktonic foraminifer assemblages displayed high diversity throughout the Paleogene from the late Paleocene to the Oligocene/Miocene boundary and consist of predominantly warm-water species. Faunas of middle Eocene age are remarkably well represented. Biostratigraphic assignment was, however, very difficult because of the turbiditic character of most of the Paleogene sediments. Reworking is a constant feature of the middle Eocene through early Oligocene planktonic faunas, with reworked faunas frequently overwhelming the younger ones. Preservation within turbidites ranges from excellent to very poor to total destruction of planktonic foraminifers. A major dissolution episode is recorded in the interval that spans most of the late Eocene through the early Oligocene, especially at the deeper sites where the source area was probably well below the lysocline. Redeposition decreases markedly by the mid-Oligocene, but it is only by late Oligocene Zone P22 that normal sedimentation resumes and/or redeposition decreases even at the most affected sites (such as Hole 709C). Comparison with other sites drilled previously in the Indian Ocean reveals that mixed assemblages were already known for sediments from the Mascarene Plateau-Seychelles Bank and surrounding basins during that time span. Because of the disturbances that characterize Paleogene deposits, hiatuses are difficult to detect; nevertheless, a hiatus of less local importance, spanning Subzone P21b, was detected in three holes at different water depths.

Calcareous nannofossil abundance and datum events of ODP Holes 181-1123C and 181-1124C, southwest Pacific

Seven sites were drilled off the eastern shore of New Zealand during Ocean Drilling Program Leg 181 to gain knowledge of southwest Pacific ocean history, in particular, the evolution of the Pacific Deep Western Boundary Current (DWBC). Holes 1123C and 1124C penetrated lower Oligocene to middle Eocene sediments containing moderately to poorly preserved calcareous nannofossils. Nannofossil assemblages show signs of dissolution and overgrowth, but key marker species can be identified. Nannofossil abundance ranges from abundant to barren. The lower Oligocene sediments are distinctly separated from the overlying Neogene sequences by the Marshall Paraconformity, a regional marker of environmental and sea level change. An age-depth model for Hole 1123C through this sequence was constructed using nine nannofossil age datums and three magnetostratigraphic datums. There is good agreement between the biostratigraphy and magnetostratigraphy, which indicates that the Marshall Paraconformity spans ~12 m.y. in Hole 1123C. The same sequence in Hole 1124C is disrupted by at least three hiatuses, complicating interpretation of the sedimentation history. The Marshall Paraconformity spans at least 3 m.y. in Hole 1124C. A 4- m.y. gap separates lower Oligocene and middle Eocene sediments, and a ~15 m.y. hiatus separates middle Eocene mudstones from middle Paleocene nannofossil-bearing mudstones. Nannofossil biostratigraphy from Holes 1123C and 1124C indicates that the Eocene-Oligocene transition was a time of fluctuating biota and intensification of the DWBC along the New Zealand margin.

Abundance estimates of diatoms in ODP Leg 207 sediments

Twenty-eight core catcher samples were provided to the author by the shipboard party for evaluation of fossil diatoms. Samples are from Ocean Drilling Program Leg 207 Holes 1257A, 1257B, 1257C, and 1258A. The samples range from 50 to 112 meters below the seafloor (mbsf) at Site 1257 and from ~22 to 60 mbsf at Site 1258. At Site 1257, samples range in age from middle Eocene (foraminifer Zone P14-13) to late Paleocene (mid-foraminifer Zone P4). At Site 1258, the samples range from middle Eocene (foraminifer Zone P11) to early Eocene (foraminifer Zone P5) according to the preliminary biostratigraphic reports (Erbacher, Mosher, Malone, et al., 2004, doi:10.2973/odp.proc.ir.207.2004). All samples were processed at Florida State University Antarctic Research Facility. Treatment included acidization and sieving through stacked 38- and 63-µm sieves. Strew slides were made from each fraction and the catcher pan. A Zeiss Photoscope II microscope was used for examination of the prepared slides. Samples from Holes 1257A, 1257B, and 1257C showed that most of the samples are barren of siliceous microfossils. Only a few radiolarians and fragments of radiolarians were observed.

Geochemistry, microbiology and phospholipid fatty acid content of ODP Site 169-1036 sediments

Phospholipid fatty acids were measured in samples of 60°-130°C sediment taken from three holes at Site 1036 (Ocean Drilling Program Leg 169) to determine microbial community structure and possible community replacement at high temperatures. Five of six samples had similar concentrations of phospholipid fatty acids (2-6 pmol/g dry weight of sediment), and biomass estimates from these measurements compare favorably with direct microscopic counts, lending support to previous microscopic measures of deep sedimentary biomass. Very long-chain phospholipid fatty acids (21 to 30 carbons) were detected in the sediment and were up to half the total phospholipid fatty acid measured; they appear to increase in abundance with temperature, but their significance is not known. Community composition from lipid analysis showed that samples contained standard eubacterial membrane lipids but no detectable archaeal lipids, though archaea would be expected to dominate the samples at high temperatures. Cluster analysis of Middle Valley phospholipid fatty acid compositions shows that lipids in Middle Valley sediment samples are similar to each other at all temperatures, with the exception of very long-chain fatty acids. The data neither support nor deny a shift to a high-temperature microbial community in hot cores, so at the present time we cannot draw conclusions about whether the microbes observed in these hot sediments are active.

Distribution of radiolarians from ODP Leg 128 holes

The analysis of radiolarians from Japan Sea subsurface sediments recovered during Leg 128 of the Ocean Drilling Program reveals that a warm-water assemblage similar to that of the North Pacific was replaced by unique post-middle Miocene faunas probably as a result of the restriction of Oceanographic circulation. The modern fauna was gradually established only in the Pleistocene. No attempt was made to establish the radiolarian zonation because of low species diversity and the absence of generally recognized index forms in the North Pacific. In the diagenetically altered quartz section, however, a radiolarian assemblage correlative to the middle Miocene Cyrtocapsella tetrapera Zone of western Honshu was identified from Hole 799B.