Global analysis of the sugarcane microtranscriptome reveals a unique composition of small RNAs associated with axillary bud outgrowth

Axillary bud outgrowth determines shoot architecture and is under the control of endogenous hormones and a fine-tuned gene-expression network, which probably includes small RNAs (sRNAs). Although it is well known that sRNAs act broadly in plant development, our understanding about their roles in vegetative bud outgrowth remains limited. Moreover, the expression profiles of microRNAs (miRNAs) and their targets within axillary buds are largely unknown. Here, we employed sRNA next-generation sequencing as well as computational and gene-expression analysis to identify and quantify sRNAs and their targets in vegetative axillary buds of the biofuel crop sugarcane (Saccharum spp.). Computational analysis allowed the identification of 26 conserved miRNA families and two putative novel miRNAs, as well as a number of trans-acting small interfering RNAs. sRNAs associated with transposable elements and protein-encoding genes were similarly represented in both inactive and developing bud libraries. Conversely, sequencing and quantitative reverse transcription-PCR results revealed that specific miRNAs were differentially expressed in developing buds, and some correlated negatively with the expression of their targets at specific stages of axillary bud development. For instance, the expression patterns of miR159 and its target GAMYB suggested that they may play roles in regulating abscisic acid-signalling pathways during sugarcane bud outgrowth. Our work reveals, for the first time, differences in the composition and expression profiles of diverse sRNAs and targets between inactive and developing vegetative buds that, together with the endogenous balance of specific hormones, may be important in regulating axillary bud outgrowth. © 2013 © The Author(2) [2013].

The tonoplast intrinsic aquaporin (TIP) subfamily of Eucalyptus grandis: Characterization of EgTIP2, a root-specific and osmotic stress-responsive gene

Aquaporins have important roles in various physiological processes in plants, including growth, development and adaptation to stress. In this study, a gene encoding a root-specific tonoplast intrinsic aquaporin (TIP) from Eucalyptus grandis (named EgTIP2) was investigated. The root-specific expression of EgTIP2 was validated over a panel of five eucalyptus organ/tissues. In eucalyptus roots, EgTIP2 expression was significantly induced by osmotic stress imposed by PEG treatment. Histochemical analysis of transgenic tobacco lines (Nicotiana tabacum SR1) harboring an EgTIP2 promoter:GUS reporter cassette revealed major GUS staining in the vasculature and in root tips. Consistent with its osmotic-stress inducible expression in eucalyptus, EgTIP2 promoter activity was up-regulated by mannitol treatment, but was down-regulated by abscisic acid. Taken together, these results suggest that EgTIP2 might be involved in eucalyptus response to drought. Additional searches in the eucalyptus genome revealed the presence of four additional putative TIP coding genes, which could be individually assigned to the classical TIP1-5 groups. © 2013 Elsevier B.V.

Expressão gênica no embrião e no endosperma micropilar de sementes de café (coffea arabica L.) durante a germinação

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Estudo do papel das proteínas mitocondriais desacopladas na tolerância aos estresses abióticos empregando diferentes abordagens

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Identificação de Single Nucleotilde Polymorphisms (SMPs) no gene Nove-cis-epoxicaroteníde dioxigenase (NCED) em Eucalyptus

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Obtenção de plantas transgênicas de soja com a forma constitutiva do fator de transcrição AREB1

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Taxa respiratória em sementes recalcitrantes de Inga vera ssp. affinis (DC.) T.D. Pennington

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Expressão gênica diferencial por cDNA-AFLP em raízes de cana-de-açúcar submetida ao déficit hídrico

Pós-graduação em Agronomia (Genética e Melhoramento de Plantas) - FCAV

Reguladores de crescimento na dormência e germinação de sementes de amendoim

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Reguladores vegetais na superação da dormência, balanço hormonal e degradação de reservas em sementes de Annona diversifolia SAFF. e A. purpurea Moc. & Sessé Ex Dunal (Annonaceae)

As sementes de anonáceas são conhecidas por apresentarem mecanismos de dormência, o que dificulta a perpetuação das espécies e a formação de áreas produtivas para a exploração comercial. Deste modo, os objetivos deste trabalho foram estudar curva de aquisição de água; a germinação de sementes tratadas com GA3 e GA4+7 + Benziladenina; o balanço hormonal e a degradação de reservas em sementes de Annona diversifolia Saff e Annona purpurea Moc & Sessé ex Dunal tratadas com reguladores vegetais para a superação da dormência. Para tanto foram realizados três experimentos. Para a construção da curva de aquisição de água foram utilizadas 4 repetições de 25 sementes que foram mantidas em embebição e pesadas durante 480 horas. O segundo experimento foi constituído pela germinação das sementes tratadas com os reguladores vegetais; o delineamento experimental empregado foi o inteiramente casualizado com 4 repetições de 25 sementes por parcela em esquema fatorial 2 x 7 (reguladores x concentrações). Os tratamentos foram constituídos pelas combinações entre concentrações de GA3 e de GA4+7 + Benziladenina (GA4+7 + BA) x 0, 200, 400, 500, 600, 800 e 1000 mg L-1 i.a.. No terceiro experimento foram quantificados ABA (Ácido abscísico) e GA (Giberelinas), proteínas, açúcares...

Fisiologia e produção da soja tratada com cinetina e cálcio sob deficit hídrico e sombreamento

The objective of this work was to evaluate the effects of kinetin and calcium applications on the physiologic and productive traits of soybean plants, subjected to drought and shade conditions, at flowering. A randomized complete block design was used, in a split-plot arrangement, with four replicates. Soybean plants cultivated in 38 dm³ pots were sprayed with calcium and kinetin, alone or mixed, and subjected to drought and shade during 12 days. After stress period, plants were cultivated under appropriate water and light availability. Calcium and kinetin application resulted in maintenance of the relative water content after four days of drought beginning. Membrane damage, measured at the end of stress period, was lower in plants sprayed with calcium and kinetin. CO2 assimilation diminished by stress condition, mainly under drought, and grain yield decreased at the same intensity in both environments.

Overexpression of the activated form of the AtAREB1 gene (AtAREB1 Delta QT) improves soybean responses to water deficit

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Fisiologia da germinação das cipselas heteromórficas em Bidens L

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Effects of hormonal priming on seed germination of pigeon pea under cadmium stress

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Expression studies in the embryo and in the micropylar endosperm of germinating coffee (Coffea arabica cv. Rubi) seeds

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)