Tandem quadruplication of HMA4 in the zinc (Zn) and cadmium (Cd) hyperaccumulator Noccaea caerulescens

Zinc (Zn) and cadmium (Cd) hyperaccumulation may have evolved twice in the Brassicaceae, in Arabidopsis halleri and in the Noccaea genus. Tandem gene duplication and deregulated expression of the Zn transporter, HMA4, has previously been linked to Zn/Cd hyperaccumulation in A. halleri. Here, we tested the hypothesis that tandem duplication and deregulation of HMA4 expression also occurs in Noccaea. A Noccaea caerulescens genomic library was generated, containing 36,864 fosmid pCC1FOS (TM) clones with insert sizes similar to 20-40 kbp, and screened with a PCR-generated HMA4 genomic probe. Gene copy number within the genome was estimated through DNA fingerprinting and pooled fosmid pyrosequencing. Gene copy numbers within individual clones was determined by PCR analyses with novel locus specific primers. Entire fosmids were then sequenced individually and reads equivalent to 20-fold coverage were assembled to generate complete whole contigs. Four tandem HMA4 repeats were identified in a contiguous sequence of 101,480 bp based on sequence overlap identities. These were flanked by regions syntenous with up and downstream regions of AtHMA4 in Arabidopsis thaliana. Promoter-reporter beta-glucuronidase (GUS) fusion analysis of a NcHMA4 in A. thaliana revealed deregulated expression in roots and shoots, analogous to AhHMA4 promoters, but distinct from AtHMA4 expression which localised to the root vascular tissue. This remarkable consistency in tandem duplication and deregulated expression of metal transport genes between N. caerulescens and A. halleri, which last shared a common ancestor > 40 mya, provides intriguing evidence that parallel evolutionary pathways may underlie Zn/Cd hyperaccumulation in Brassicaceae.

Causal relationship between obesity and vitamin D status: bi-directional mendelian randomization analysis of multiple cohorts

BACKGROUND: Obesity is associated with vitamin D deficiency, and both are areas of active public health concern. We explored the causality and direction of the relationship between body mass index (BMI) and 25-hydroxyvitamin D [25(OH)D] using genetic markers as instrumental variables (IVs) in bi-directional Mendelian randomization (MR) analysis. METHODS AND FINDINGS: We used information from 21 adult cohorts (up to 42,024 participants) with 12 BMI-related SNPs (combined in an allelic score) to produce an instrument for BMI and four SNPs associated with 25(OH)D (combined in two allelic scores, separately for genes encoding its synthesis or metabolism) as an instrument for vitamin D. Regression estimates for the IVs (allele scores) were generated within-study and pooled by meta-analysis to generate summary effects. Associations between vitamin D scores and BMI were confirmed in the Genetic Investigation of Anthropometric Traits (GIANT) consortium (n = 123,864). Each 1 kg/m(2) higher BMI was associated with 1.15% lower 25(OH)D (p = 6.52×10⁻²⁷). The BMI allele score was associated both with BMI (p = 6.30×10⁻⁶²) and 25(OH)D (-0.06% [95% CI -0.10 to -0.02], p = 0.004) in the cohorts that underwent meta-analysis. The two vitamin D allele scores were strongly associated with 25(OH)D (p≤8.07×10⁻⁵⁷ for both scores) but not with BMI (synthesis score, p = 0.88; metabolism score, p = 0.08) in the meta-analysis. A 10% higher genetically instrumented BMI was associated with 4.2% lower 25(OH)D concentrations (IV ratio: -4.2 [95% CI -7.1 to -1.3], p = 0.005). No association was seen for genetically instrumented 25(OH)D with BMI, a finding that was confirmed using data from the GIANT consortium (p≥0.57 for both vitamin D scores). CONCLUSIONS: On the basis of a bi-directional genetic approach that limits confounding, our study suggests that a higher BMI leads to lower 25(OH)D, while any effects of lower 25(OH)D increasing BMI are likely to be small. Population level interventions to reduce BMI are expected to decrease the prevalence of vitamin D deficiency.

The role of animal nutrition in designing optimal foods of animal origin as reviewed by the COST Action Feed for Health (FA0802)

This review provides an overview of the main scientific outputs of a network (Action) supported by the European Cooperation in Science and Technology (COST) in the field of animal science, namely the COST Action Feed for Health (FA0802). The main aims of the COST Action Feed for Health (FA0802) were: to develop an integrated and collaborative network of research groups that focuses on the roles of feed and animal nutrition in improving animal wellbeing and also the quality, safety and wholesomeness of human foods of animal origin; to examine the consumer concerns and perceptions as regards livestock production systems. The COST Action Feed for Health has addressed these scientific topics during the last four years. From a practical point of view three main scientific fields of achievement can be identified: feed and animal nutrition; food of animal origin quality and functionality and consumers’ perceptions. Finally, the present paper has the scope to provide new ideas and solutions to a range of issues associated with the modern livestock production system.

Fonsecaea pedrosoi infection induces differential modulation of costimulatory molecules and cytokines in monocytes from patients with severe and mild forms of chromoblastomycosis

The host defense mechanism in chromoblastomycosis has not been thoroughly investigated. It has been suggested that cell- mediated immunity in patients with long- standing chromoblastomycosis is somehow impaired. As a result, these individuals became unable to develop an efficient immune reaction. Many studies have shown that monocyte- derived macrophages exhibit critical activities in immunity to microorganisms. Moreover, the ability of cells from the monocytic lineage to process and present antigens, to produce cytokines, and to provide costimulatory signals confirms their pivotal role in the initiation of specific immune responses. In the present study, it was observed that monocytes from patients with a severe form of disease had a higher production of IL- 10 and a lower expression of HLA- DR and costimulatory molecules when stimulated with specific antigen or LPS. Immune modulation with recombinant IL- 12 or anti- IL- 10 can restore the antigen- specific Th1- type immune response in chromoblastomycosis patients by up- regulating HLA- DR and costimulatory molecules in monocytes. Therefore, our data show that monocytes from patients with different clinical forms of chromoblastomycosis present distinct phenotypic and functional profiles. This observation suggests possible mechanisms that control the T cell response and influence their role in the development of pathology.

Suppressing grazing chaos in impacting system by structural nonlinearity

In this note we investigate the influence of structural nonlinearity of a simple cantilever beam impacting system on its dynamic responses close to grazing incidence by a means of numerical simulation. To obtain a clear picture of this effect we considered two systems exhibiting impacting motion, where the primary stiffness is either linear (piecewise linear system) or nonlinear (piecewise nonlinear system). Two systems were studied by constructing bifurcation diagrams, basins of attractions, Lyapunov exponents and parameter plots. In our analysis we focused on the grazing transitions from no impact to impact motion. We observed that the dynamic responses of these two similar systems are qualitatively different around the grazing transitions. For the piecewise linear system, we identified on the parameter space a considerable region with chaotic behaviour, while for the piecewise nonlinear system we found just periodic attractors. We postulate that the structural nonlinearity of the cantilever impacting beam suppresses chaos near grazing. (C) 2007 Elsevier Ltd. All rights reserved.

PAIN IN FIBROMYALGIA AND DISCRIMINATIVE POWER OF THE INSTRUMENTS: VISUAL ANALOG SCALE, DOLORIMETRY AND THE MCGILL PAIN QUESTIONNAIRE

Objective: The aim of this study was to verify the discriminative power of the most widely used pain assessment instruments. Methods: The sample consisted of 279 subjects divided into Fibromyalgia Group (FM- 205 patients with fibromyalgia) and Control Group (CG-74 healthy subjects), mean age 49.29 +/- 10.76 years. Only 9 subjects were male, 6 in FM and 3 in CG. FM were outpatients from the Rheumatology Clinic of the University of Sao Paulo - Hospital das Clinicas (HCFMUSP); the CG included people accompanying patients and hospital staff with similar socio-demographic characteristics. Three instruments were used to assess pain: the McGill Pain Questionnaire (MPQ), the Visual Analog Scale (VAS), and the Dolorimetry, to measure pain threshold on tender points (generating the TP index). In order to assess the discriminative power of the instruments, the measurements obtained were submitted to descriptive analysis and inferential analysis using ROC Curve - sensibility (S), specificity (S I) and area under the curve (AUC) - and Contingence tables with Chi-square Test and odds ratio. Significance level was 0.05. Results: Higher sensibility, specificity and area under the curve was obtained by VAS (80%, 80% and 0.864, respectively), followed by Dolorimetry (S 77%, S177% and AUC 0.851), McGill Sensory (S 72%, S167% and AUC 0.765) and McGill Affective (S 69%, S1 67% and AUC 0.753). Conclusions: VAS presented the higher sensibility, specificity and AUC, showing the greatest discriminative power among the instruments. However, these values are considerably similar to those of Dolorimetry.

Clonagem e caracterização parcial de cDNA de glândula salivar de Boophilus microplus (Acari:Ixodidae) similar a glutationa s-transferase

O carrapato Boophilus microplus é um ectoparasita hematófago de bovino que causa sérias perdas econômicas. Estudos para o desenvolvimento de formas alternativas de controle do carrapato tem sido realizados para diminuir ou substituir a aplicação de agentes químicos, que contaminam o ambiente, os derivados da carne, além dos problemas de resistência das gerações de carrapatos aos acaricidas. As vacinas são uma forma alternativa de controle do carrapato. As enzimas glutationa S-transferase (GSTs) são alvo potencial para intervenção imunológica contra alguns parasitas. Este trabalho teve como objetivo isolar e caracterizar parcialmente um cDNA de B. microplus similar a GST da classe Mu. O clone SG2 foi isolado dentre aproximadamente 8 x 103 pfu de fagos recombinantes de uma biblioteca de cDNA de glândula salivar de partenógina, sondada com anti-soro de coelho contra glândula salivar. O clone SG2 contendo um inserto de 864 pb teve sua seqüência determinada e a fase de leitura aberta corresponde a 220 amino ácidos. A análise desta seqüência indicou que o gene clonado codifica uma GST de B. microplus (BmGST) com um motivo altamente conservado entre os resíduos 60 e 68 que compreende o sítio de ligação a glutationa (GSH) e outro motivo SLAILRYL, centrado no resíduo 78 da seqüência. No alinhamento múltiplo da AgSG2 com outras GSTs foi observada uma similaridade de até 41% com GSTs da classe Mu de outros organismos e inclusive com outra GST da classe Mu isolada de larva de B. microplus (HE et al., 1999). A proteína recombinante AgSG2 purificada apresentou atividade enzimática contra o substrato cromogênico CDNB. Ensaios de atividade enzimática com extratos de tecidos, secreções e excreções foram realizados para verificar a presença de GST. Ensaios de RT-PCR com tecidos de B. microplus indicaram que os sítios de síntese de BmGST são glândulas salivares e intestino de partenógina e teleógina.

Raça, etnia e as complicações crônicas do diabetes melito tipo 2

Fatores genéticos e ambientais são apontados como fatores causais para explicar as diferenças no desenvolvimento de problemas de saúde entre grupos étnicos. O conceito de raça/etnia é definido, assim como as indicações de seu uso. Diabetes melito (DM) como um estado de doença com uma marcada variabilidade étnico-racial é utilizado como exemplo de análise. Através de estudo transversal avaliou-se a prevalência das complicações vasculares em uma amostra de pacientes com DM tipo 2. Um total de 864 pacientes, incluindo 656 brancos, 104 mulatos e 104 pretos, classificados por auto-definição, foram avaliados através de protocolo padrão para doença arterial coronariana (DAC), doença vascular periférica (DVP), acidente vascular cerebral (AVC), retinopatia diabética (RD), nefropatia diabética (ND) e neuropatia diabética sensório-motora distal (NSMD). Pacientes brancos e mulatos eram mais velhos que os pacientes pretos (61,0 ± 9,3 vs. 60,1 ± 10,3 vs. 56,0 ± 10,3 anos; P <0,001), embora o tempo de duração do DM fosse semelhante entre os grupos (14,8 ± 8,2 vs. 14,2 ± 6,7 vs. 13,3 ± 7,0 anos; P = 0,169). Parâmetros antropométricos (índice de massa corporal e medida da cintura), prevalência de síndrome metabólica, hipertensão arterial sistêmica, níveis de hemoglobina glicada, também foram similares entre os grupos. Em relação às complicações crônicas do DM, brancos, mulatos e pretos apresentaram-se com uma prevalência similar de DVP, AVC e NSMD. Mulatos e pretos, quando comparados com brancos, apresentaram uma maior prevalência de DAC (45,4% vs. 60,4% vs. 39,2% ; P=0,004). As prevalências de microalbuminúria (22,4%, 21,2 e 22,1%; P= 0,906) e macroalbuminuria (16,2%, 19,2% and 13,5%; P= 0,915) foram similares entre os grupos. Doença renal avançada (diálise) (9% vs. 8,7% vs. 18,3%; P=0,012) e RDP (21,5% vs. 15,4% vs. 34,6%; P=0,005) foram mais freqüentes em pretos. Estas diferenças se mantiveram após ajustes para possíveis fatores de confusão. Concluindo, em pacientes com DM tipo 2 com o mesmo tipo de assistência médica, controle pressórico e metabólico, foi observada uma prevalência maior de DAC, RDP e doença renal avançada em pacientes pretos. Os mecanismos pelos quais estas diferenças ocorrem não são claros e componentes genéticos e/ou ambientais devem ser melhor explorados. Entretanto, até que este melhor entendimento seja disponível, uma abordagem mais agressiva na avaliação e manejo dos fatores de risco para as complicações do DM nos indivíduos pretos deve ser pensada.

Ansiedade infantil em contexto cirúrgico: estudo experimental

Na infância, a hospitalização, em especial por circunstâncias cirúrgicas, constitui uma experiência potencialmente ameaçadora e causadora de ansiedade, medo e stress, que não se circunscreve apenas à criança, mas também aos pais e à família. A presença de níveis elevados de ansiedade infantil pode ter consequências nefastas e comprometedoras do desenvolvimento psicológico. A preparação psicológica da criança é crucial para a redução da ansiedade e das alterações do comportamento pós-hospitalização, razão porque considerámos fundamental colmatar a inexistência de um programa similar destinado ao utente pediátrico do HDESPDL. Desta forma, concebemos o Programa Infantil de Preparação para a Cirurgia (PIPCirurgia), um instrumento de preparação psicológica destinado a crianças entre os 6-11 anos propostas para cirurgia eletiva com internamento programado. O PIPCirurgia pretende preparar criança e pais, trabalhar estratégias de coping e reduzir a ansiedade e as alterações comportamentais pós-hospitalização. Validámos a sua utilidade através de um plano metodológico experimental aplicado a uma amostra de 60 crianças, equitativamente subdividida em Grupo Experimental (submetido ao PIPCirurgia) e Grupo de Controlo (recebeu o procedimento atualmente disponibilizado pela instituição). A investigação efetivou-se através de dois estudos, Estudo I: Ansiedade infantil e Caraterísticas Sociodemográficas e Estudo II: Efeitos do PIPCirurgia na redução da Ansiedade Infantil e das Alterações do Comportamento Pós-Hospitalização. Utilizaram-se métodos de recolha de dados quantitativos. Aplicou-se um Questionário de Caraterização Sociodemográfica, a versão traduzida e validada para a população portuguesa do State-Trait Anxiety Inventory for Children, e uma versão por nós traduzida e testada do Post-Hospitalization Behavior Questionnaire. Concluímos que, para as amostras em estudo, existiu uma relação entre a Ansiedade Infantil e a presença de antecedentes familiares de doença, assim como entre a Ansiedade-Estado pré-operatória e a situação de emprego materno. Confirmou-se a utilidade do PIPCirurgia para reduzir a Ansiedade Infantil relacionada com a cirurgia e minimizar as alterações comportamentais pós-hospitalização.