Spatial distribution of the soil carbon pool in a Holm oak dehesa in Spain

Aims Dehesas are agroforestry systems characterized by scattered trees among pastures, crops and/or fallows. A study at a Spanish dehesa has been carried out to estimate the spatial distribution of the soil organic carbon stock and to assess the influence of the tree cover. Methods The soil organic carbon stock was estimated from the five uppermost cm of themineral soil with high spatial resolution at two plots with different grazing intensities. The Universal Kriging technique was used to assess the spatial distribution of the soil organic carbon stocks, using tree coverage within a buffering area as an auxiliary variable. Results A significant positive correlation between tree presence and soil organic carbon stocks up to distances of around 8 m from the trees was found. The tree crown cover within a buffer up to a distance similar to the crown radius around the point absorbed 30 % of the variance in the model for both grazing intensities, but residual variance showed stronger spatial autocorrelation under regular grazing conditions. Conclusions Tree cover increases soil organic carbon stocks, and can be satisfactorily estimated by means of crown parameters. However, other factors are involved in the spatial pattern of the soil organic carbon distribution. Livestock plays an interactive role together with tree presence in soil organic carbon distribution.

Assessment of CTF boiling transition and critical heat flux modeling capabilities using the OECD/NRC BFBT and PSBT benchmark databases

Over the last few years, the Pennsylvania State University (PSU) under the sponsorship of the US Nuclear Regulatory Commission (NRC) has prepared, organized, conducted, and summarized two international benchmarks based on the NUPEC data—the OECD/NRC Full-Size Fine-Mesh Bundle Test (BFBT) Benchmark and the OECD/NRC PWR Sub-Channel and Bundle Test (PSBT) Benchmark. The benchmarks’ activities have been conducted in cooperation with the Nuclear Energy Agency/Organization for Economic Co-operation and Development (NEA/OECD) and the Japan Nuclear Energy Safety (JNES) Organization. This paper presents an application of the joint Penn State University/Technical University of Madrid (UPM) version of the well-known sub-channel code COBRA-TF (Coolant Boiling in Rod Array-Two Fluid), namely, CTF, to the steady state critical power and departure from nucleate boiling (DNB) exercises of the OECD/NRC BFBT and PSBT benchmarks. The goal is two-fold: firstly, to assess these models and to examine their strengths and weaknesses; and secondly, to identify the areas for improvement.

The contribution of two common shrub species to aboveground and belowgraound carbon pool in Iberian Dehesas

Shrubs play an important role in water-limited agro-silvo-pastoral systems by providing shelter and forage for livestock, for erosion control, to maintain biodiversity, diversifying the landscape, and above all, facilitating the regeneration of trees. Furthermore, the carbon sink capacity of shrubs could also help to mitigate the effects of climate change since they constitute a high proportion of total plant biomass. The contribution of two common extensive native shrub species (Cistus ladanifer L. and Retama sphaerocarpa (L.) Boiss.) to the carbon pool of Iberian dehesas (Mediterranean agro-silvo-pastoral systems) is analyzed through biomass models developed at both individual (biovolume depending) and community level (height and cover depending). The total amount of carbon stored in these shrubs, including above- and belowground biomass, ranges from 1.8 to 11.2 Mg C ha_1 (mean 6.8 Mg C ha_1) for communities of C. ladanifer and from 2.6 to 8.6 Mg C ha_1 (mean 4.5 Mg C ha_1) for R. sphaerocarpa. These quantities account for over 20e30% of the total plant biomass in the system. The potential for carbon sequestration of these shrubs in the studied system ranges 0.10e1.32 Mg C ha_1 year_1 and 0.25e1.25 Mg C ha_1 year_1 for the C. ladanifer and R. sphaerocarpa communities’ respectively

Potential issues related to emergency core cooling system strainers performance at boiling water reactors: application to Cofrentes NPP (Spain)

From the 60s to the 90s, a great number of events related to the Emergency Core Cooling Systems Strainers have been happened in all kind of reactors all over the world. Thus, the Nuclear Regulatory Commission of the USA emitted some Bulletins to address the concerns about the adequacy of Emergency Core Cooling Systems (ECCS) strainer performance at boiling water reactors (BWR). In Spain the regulatory body (Consejo de Seguridad Nuclear, CSN) adopted the USA regulation and Cofrentes NPP installed new strainers with a considerable bigger size than the old strainers. The nuclear industry conducted significant and extensive research, guidance development, testing, reviews, and hardware and procedure changes during the 90s to resolve the issues related to debris blockage of BWR strainers. In 2001 the NRC and CSN closed the Bulletins. Thereafter, the strainers issues were moved to the PWR reactors. In 2004 the NRC issued a Generic Letter (GL). It requested the resolution of several effects which were not noted in the past. The GL regarded to be resolved by the PWR reactors but the NRC in USA and the CSN in Spain have requested that the BWR reactors investigate differences between the methodologies used by the BWRs and PWRs. The developments and improvements done for Cofrentes NPP are detailed. Studies for this plant show that the head loss due to the considered debris is at most half of the limited head loss for the ECCS strainer and the NPSH (Net Positive Suction Head) required for the ECCS pumps is at least three times lower than the NPSH available.

Metodología de simulación numérica de la transferencia de calor por ebullición en película en torno a superficies esféricas refrigeradas por líquido saturado en convección libre: aplicación a reactores nucleares de lecho de bolas (PBR)

En la presente Tesis se realizó un análisis numérico, usando el código comercial Ansys-Fluent, de la refrigeración de una bola de combustible de un reactor de lecho de bolas (PBR, por sus siglas en inglés), ante un escenario de emergencia en el cual el núcleo sea desensamblado y las bolas se dejen caer en una piscina de agua, donde el mecanismo de transferencia de calor inicialmente sería la ebullición en película, implicando la convección y la radiación al fluido. Previamente se realizaron pruebas de validación, comparando los resultados numéricos con datos experimentales disponibles en la literatura para tres geometrías diferentes, lo cual permitió seleccionar los esquemas y modelos numéricos con mejor precisión y menor costo computacional. Una vez identificada la metodología numérica, todas las pruebas de validación fueron ampliamente satisfactorias, encontrándose muy buena concordancia en el flujo de calor promedio con los datos experimentales. Durante estas pruebas de validación se lograron caracterizar numéricamente algunos parámetros importantes en la ebullición en película con los cuales existen ciertos niveles de incertidumbre, como son el factor de acoplamiento entre convección y radiación, y el factor de corrección del calor latente de vaporización. El análisis térmico de la refrigeración de la bola del reactor por ebullición en película mostró que la misma se enfría, a pesar del calor de decaimiento, con una temperatura superficial de la bola que desciende de forma oscilatoria, debido al comportamiento inestable de la película de vapor. Sin embargo, la temperatura de esta superficie tiene una buena uniformidad, notándose que las áreas mejor y peor refrigeradas están localizadas en la parte superior de la bola. Se observó la formación de múltiples domos de vapor en diferentes posiciones circunferenciales, lo cual causa que el área más caliente de la superficie se localice donde se forman los domos más grandes. La separación entre los domos de vapor fue consistente con la teoría hidrodinámica, con la adición de que la separación entre domos se reduce a medida que evolucionan y crecen, debido a la curvatura de la superficie. ABSTRACT A numerical cooling analysis of a PBR fuel pebble, after an emergency scenario in which the nucleus disassembly is made and the pebbles are dropped into a water pool, transmitting heat by film boiling, involving convection and radiation to the fluid, is carried out in this Thesis. First, were performed validation tests comparing the numerical results with experimental works available for three different geometries, which allowed the selection of numerical models and schemes with better precision and lower computational cost. Once identified the numerical methodology, all validation tests were widely satisfactory, finding very good agreement with experimental works in average heat flux. During these validation tests were achieved numerically characterize some important parameters in film boiling with which there are certain levels of uncertainty, such as the coupling factor between convection and radiation, and the correction factor of the latent heat of vaporization. The thermal analysis of pebble cooling by film boiling shows that despite its decay heat, cooling occurs, with pebble surface temperature descending from an oscillatory manner, due to the instability of the vapor film. However, the temperature of this surface has a good uniformity, noting that the best and worst refrigerated area is located at the top of the pebble. The formation of multiple vapor domes at different circumferential positions is observed, which cause that the hottest area of the surface was located where biggest vapor domes were formed. The separation between vapor domes was consistent with the hydrodynamic theory, with the addition that the separation is reduced as the vapor dome evolves and grows, due to the surface curvature.

Male fitness increases when females are eliminated from gene pool: Implications for the Y chromosome

Because the two sexes share a common gene pool while performing many different biological functions, mutations benefiting one sex may not accumulate due to counter selection in the other sex. In these experiments 99% of a haploid genome of Drosophila melanogaster was constrained to segregate like a male-limited Y chromosome for 41 generations, thereby eliminating potential counter selection in females. The synthetic Y chromosomes rapidly accumulated genetic variation that increased male fitness and decreased female fitness. The survival and fertility of females declined when they were mated to males expressing the synthetic Y chromosomes. These results suggests that opposing selection between the sexes may substantially interfere with sex-specific adaptation. They also demonstrate how intersexual evolutionary conflict can lead to perpetual degeneration of the Y via genetic hitchhiking of deleterious mutations.

Identification of Discrete Classes of Endosome-derived Small Vesicles as a Major Cellular Pool for Recycling Membrane Proteins

Vesicles carrying recycling plasma membrane proteins from early endosomes have not yet been characterized. Using Chinese hamster ovary cells transfected with the facilitative glucose transporter, GLUT4, we identified two classes of discrete, yet similarly sized, small vesicles that are derived from early endosomes. We refer to these postendosomal vesicles as endocytic small vesicles or ESVs. One class of ESVs contains a sizable fraction of the pool of the transferrin receptor, and the other contains 40% of the total cellular pool of GLUT4 and is enriched in the insulin-responsive aminopeptidase (IRAP). The ESVs contain cellubrevin and Rab4 but are lacking other early endosomal markers, such as EEA1 or syntaxin13. The ATP-, temperature-, and cytosol-dependent formation of ESVs has been reconstituted in vitro from endosomal membranes. Guanosine 5′-[γ-thio]triphosphate and neomycin, but not brefeldin A, inhibit budding of the ESVs in vitro. A monoclonal antibody recognizing the GLUT4 cytoplasmic tail perturbs the in vitro targeting of GLUT4 to the ESVs without interfering with the incorporation of IRAP or TfR. We suggest that cytosolic proteins mediate the incorporation of recycling membrane proteins into discrete populations of ESVs that serve as carrier vesicles to store and then transport the cargo from early endosomes, either directly or indirectly, to the cell surface.

The Role of the Alternative Oxidase in Stabilizing the in Vivo Reduction State of the Ubiquinone Pool and the Activation State of the Alternative Oxidase

A possible function for the alternative (nonphosphorylating) pathway is to stabilize the reduction state of the ubiquinone pool (Qr/Qt), thereby avoiding an increase in free radical production. If the Qr/Qt were stabilized by the alternative pathway, then Qr/Qt should be less stable when the alternative pathway is blocked. Qr/Qt increased when we exposed roots of Poa annua (L.) to increasing concentrations of KCN (an inhibitor of the cytochrome pathway). However, when salicylhydroxamic acid, an inhibitor of the alternative pathway, was added at the same time, Qr/Qt increased significantly more. Therefore, we conclude that the alternative pathway stabilizes Qr/Qt. Salicylhydroxamic acid increasingly inhibited respiration with increasing concentrations of KCN. In the experiments described here the alternative oxidase protein was invariably in its reduced (high-activity) state. Therefore, changes in the reduction state of the alternative oxidase cannot account for an increase in activity of the alternative pathway upon titration with KCN. The pyruvate concentration in intact roots increased only after the alternative pathway was blocked or the cytochrome pathway was severely inhibited. The significance of the pyruvate concentration and Qr/Qt on the activity of the alternative pathway in intact roots is discussed.

Nonphotochemical Reduction of the Plastoquinone Pool in Sunflower Leaves Originates from Chlororespiration1

We investigated the relationship between nonphotochemical plastoquinone reduction and chlororespiration in leaves of growth-chamber-grown sunflower (Helianthus annuus L.). Following a short induction period, leaves of previously illuminated sunflower showed a substantially increased level of minimal fluorescence following a light-to-dark transition. This increase in minimal fluorescence was reversed by far-red illumination, inhibited by rotenone or photooxidative methyl viologen treatment, and stimulated by fumigation with CO. Using flash-induced electrochromic absorption-change measurements, we observed that the capacity of sunflower to reduce plastoquinone in the dark influenced the activation state of the chloroplast ATP synthase, although chlororespiratory transmembrane electrochemical potential formation alone does not fully explain our observations. We have added several important new observations to the work of others, forming, to our knowledge, the first strong experimental evidence that chlororespiratory, nonphotochemical plastoquinone reduction and plastoquinol oxidation occur in the chloroplasts of higher plants. We have introduced procedures for monitoring and manipulating chlorores-piratory activity in leaves that will be important in subsequent work aimed at defining the pathway and function of this dark electron flux in higher plant chloroplasts.

Glutamate is required to maintain the steady-state potassium pool in Salmonella typhimurium.

In many bacteria, accumulation of K+ at high external osmolalities is accompanied by accumulation of glutamate. To determine whether there is an obligatory relationship between glutamate and K+ pools, we studied mutant strains of Salmonella typhimurium with defects in glutamate synthesis. Enteric bacteria synthesize glutamate by the combined action of glutamine synthetase and glutamate synthase (GS/GOGAT cycle) or the action of biosynthetic glutamate dehydrogenase (GDH). Activity of the GS/GOGAT cycle is required under nitrogen-limiting conditions and is decreased at high external ammonium/ammonia ((NH4)+) concentrations by lowered synthesis of GS and a decrease in its catalytic activity due to covalent modification (adenylylation by GS adenylyltransferase). By contrast, GDH functions efficiently only at high external (NH4)+ concentrations, because it has a low affinity for (NH4)+. When grown at low concentrations of (NH4)+ (< or = 2 mM), mutant strains of S. typhimurium that lack GOGAT and therefore are dependent on GDH have a low glutamate pool and grow slowly; we now demonstrate that they have a low K+ pool. When subjected to a sudden (NH4)+ upshift, strains lacking GS adenylyltransferase drain their glutamate pool into glutamine and grow very slowly; we now find that they also drain their K+ pool. Restoration of the glutamate pool in these strains at late times after shift was accompanied by restoration of the K+ pool and a normal growth rate. Taken together, the results indicate that glutamate is required to maintain the steady-state K+ pool -- apparently no other anion can substitute as a counter-ion for free K+ -- and that K+ glutamate is required for optimal growth.

Isolation of virus-neutralizing RNAs from a large pool of random sequences.

RNA and ribonuclease-resistant RNA analogs that bound and neutralized Rous sarcoma virus (RSV) were isolated from a large pool of random sequences by multiple cycles of in vitro selection using infectious viral particles. The selected RNA pool of RSV-binding sequences at a concentration of 0.16 microM completely neutralized the virus. Of 19 sequences cloned from the selected pool, 5 inhibited RSV infection. The selected RNA and RNA analogs were shown to neutralize RSV by interacting with the virus, rather than by adversely affecting the host cells. The selection of the anti-RSV RNA and RNA analogs by intact virions immediately suggests the potential application of this approach to develop RNA and RNA analogs as inhibitors of other viruses such as human immunodeficiency virus.

Light intensity regulation of cab gene transcription is signaled by the redox state of the plastoquinone pool.

The eukaryotic green alga Dunaliella tertiolecta acclimates to decreased growth irradiance by increasing cellular levels of light-harvesting chlorophyll protein complex apoproteins associated with photosystem II (LHCIIs), whereas increased growth irradiance elicits the opposite response. Nuclear run-on transcription assays and measurements of cab mRNA stability established that light intensity-dependent changes in LHCII are controlled at the level of transcription. cab gene transcription in high-intensity light was partially enhanced by reducing plastoquinone with 3-(3,4-dichlorophenyl)-1,1-dimethyl urea (DCMU), whereas it was repressed in low-intensity light by partially inhibiting the oxidation of plastoquinol with 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone (DBMIB). Uncouplers of photosynthetic electron transport and inhibition of water splitting had no effect on LHCII levels. These results strongly implicate the redox state of the plastoquinone pool in the chloroplast as a photon-sensing system that is coupled to the light-intensity regulation of nuclear-encoded cab gene transcription. The accumulation of cellular chlorophyll at low-intensity light can be blocked with cytoplasmically directed phosphatase inhibitors, such as okadaic acid, microcystin L-R, and tautomycin. Gel mobility-shift assays revealed that cells grown in high-intensity light contained proteins that bind to the promoter region of a cab gene carrying sequences homologous to higher plant light-responsive elements. On the basis of these experimental results, we propose a model for a light intensity signaling system where cab gene expression is reversibly repressed by a phosphorylated factor coupled to the redox status of plastoquinone through a chloroplast protein kinase.