Relações filogenéticas das espécies de Crenicichla Heckel, 1840 e Teleocichla Kullander, 1988 (Teleostei: Cichlidae)

São reconhecidos 90 nomes específicos válidos de Crenicichla e oito de Teleocichla. Juntos, os dois gêneros-alvo do presente estudo compreendem quase 1/5 da diversidade total de Cichlinae, subfamília neotropical de Cichlidae. Apesar das espécies de Crenicichla e Teleocichla formarem um clado bem corroborado através de filogenias baseadas tanto em dados morfológicos quanto em dados moleculares, as relações entre as suas espécies foram ainda pouco estudadas. Os dois estudos filogenéticos de Crenicichla conhecidos são parcialmente discordantes entre si e incorporaram apenas uma parcela da diversidade do grupo. Baseados apenas em dados moleculares, não foram acompanhados por um estudo de caracteres morfológicos que indicariam as sinapomorfias ou características diagnósticas para identificação dos grupos monofiléticos delimitados. No presente estudo, os principais objetivos consistem em testar o monofiletismo do grupo formado pelas espécies de Crenicichla e Teleocichla e identificar e definir unidades monofiléticas dentro desse grupo, com base na análise cladística de caracteres morfológicos. Como objetivo secundário, são testadas as recentes hipóteses de relações filogenéticas dessas espécies com as demais espécies de ciclídeos neotropicais. Foram incluídas todas as espécies válidas de Teleocichla e 54 espécies válidas de Crenicichla (60% das espécies válidas), além de uma espécie nova de Teleocichla e cinco prováveis espécies novas de Crenicichla. 20 representantes de diferentes linhagens de Cichlinae foram incluídos, totalizando 88 táxons terminais. As análises cladísticas foram realizadas a partir de uma matriz com 211 caracteres provenientes do estudo comparado de morfologia externa, incluindo padrões de colorido e osteologia. Além da análise com pesagens igualitárias, foram explorados também os resultados das análises com pesagem implícita utilizando diferentes valores da variável k e com pesagem sucessiva. A partir da comparação e discussão dos resultados obtidos a partir das diferentes análises, a topologia obtida através da análise com pesagem implícita utilizando o valor de k=3 foi escolhida para obtenção das inferências filogenéticas. Duas classificações alternativas foram discutidas e, a fim de minimizar mudanças nomenclaturais, aquela baseada no reconhecimento de subgêneros de Crenicichla correspondendo aos grupos monofiléticos encontrados foi preferida em detrimento da proposta baseada no reconhecimento de vários gêneros. Isso porque o posicionamento de Crenicichla macrophthalma (espécie-tipo de Crenicichla) continua sendo considerado instável. O gênero Crenicichla é corroborado como um grande clado formado por todas as espécies de Crenicichla e Teleocichla incluídas e é sustentado por 40 sinapomorfias não-ambíguas. Um complexo cenário foi encontrado quanto às relações entre as espécies de Crenicichla, com várias linhagens dentro desse grande grupo, assim como era previsto de acordo com estudos filogenéticos prévios. As relações entre essas linhagens, por outro lado, são ainda instáveis, podendo variar de acordo com os diferentes tipos de pesagem aplicados e apresentam algumas divergências em relação aos estudos prévios, que também divergem entre si. Teleocichla é um grupo monofilético dentro de Crenicichla e foi considerado como um de seus oito subgêneros. O subgênero Crenicichla é constituído apenas por Crenicichla macrophthalma. Os seis subgêneros restantes (Wallaciia, Batrachops, Hemeraia, Saxatilia, Lugubria e Lacustria) correspondem totalmente ou parcialmente a grupos de espécies de Crenicichla previamente existentes na literatura. Em Lacustria, quatro complexos de espécies foram delimitados: C. missioneira, C. scotti, C. jaguarensis e C. lacustris sensu stricto. Foram listadas as espécies nominais de cada subgênero e uma diagnose para auxiliar a identificação dos mesmos foi elaborada. Uma nova hipótese de relações de Crenicichla em Cichlinae é inferida a partir da análise realizada, na qual Crenicichla é grupo-irmão de um clado formado por Chaetobranchus flavescens e todos os representantes de Cichlasomatini e Geophagini incluídos

(Table 1) Major and trace elements analyses from FAMOUS-Project and DSDP Site 54-424

Hydrothermal deposits "sensu stricto" have been recovered during the FAMOUS cruise and Leg 54 of the Deep Sea Drilling Project near the Galapagos Spreading Centre. The studied sediments, mainly composed of clay material, have very poor REE concentrations, below about ten ppm. The shale-normalized patterns are characterized by a significant enrichment in heavy rare earths and show a negative Ce anomaly. The magnitude of this anomaly fluctuates but is generally lower than the seawater Ce anomaly. The geochemical characteristics of these hydrothermal deposits are in contrast with those of metalliferous sediments which are more enriched in trace elements, especially in REE.

Sea surface temperature and stable isotopes from 9 cores of the Northeastern Atlantic

Temporal and spatial patterns in eastern North Atlantic sea-surface temperatures (SST) were reconstructed for marine isotope stage (MIS) 11c using a submeridional transect of five sediment cores. The SST reconstructions are based on planktic foraminiferal abundances and alkenone indices, and are supported by benthic and planktic stable isotope measurements, as well as by ice-rafted debris content in polar and middle latitudes. Additionally, the larger-scale dynamics of the precipitation regime over northern Africa and the western Mediterranean region was evaluated from iron concentrations in marine sediments off NW Africa and planktic d13C in combination with analysis of planktic foraminiferal abundances down to the species level in the Mediterranean Sea. Compared to the modern situation, it is revealed that during entire MIS 11c sensu stricto (ss), i.e., between 420 and 398 ka according to our age models, a cold SST anomaly in the Nordic seas co-existed with a warm SST anomaly in the middle latitudes and the subtropics, resulting in steeper meridional SST gradients than during the Holocene. Such a SST pattern correlates well with a prevalence of a negative mode of the modern North Atlantic Oscillation. We suggest that our scenario might partly explain the longer duration of wet conditions in the northern Africa during MIS 11c compared to the Holocene.

Stable isotope and Mg/Ca ratio of sediment core GeoB12610-2

To reconstruct the still poorly understood thermocline fluctuations in the western tropical Indian Ocean, a sediment core located off Tanzania (GeoB12610-2; 04°49.00'S, 39°25.42'E, 399?m water depth) covering the last 35 ka was analysed. Mg/Ca-derived temperatures from the planktonic foraminifera Globigerinoides ruber (white) and Neogloboquadrina dutertrei indicate that the last glacial was ~2.5 °C colder in the surface waters and ~3.5 °C colder in the thermocline compared with the present day. The depth of the thermocline and thus the stratification of the water column were shallower during glacial periods and deepened during the deglaciation and Holocene. The increased inflow of Southern Ocean Intermediate Waters via 'ocean tunnels' appears to cool the thermocline from below, leading to a similarity between the thermocline record of GeoB12610-2 with the Antarctic EDML temperature curve during the glacial. With rising sea level and the corresponding greater inflow of Red Sea Waters and Indonesian Intermediate Waters, the proportion of Southern Ocean Intermediate Water within the South Equatorial Current is reduced and, by Holocene time, the correlation to Antarctica is barely traceable. Comparison with the eastern Indian Ocean reveals that the thermocline depth reverses from the last glacial to present.

Mesostigmatid mites (Acari : Mesostigmata) on rainforest tree trunks: Arboreal specialists, but substrate generalists?

Predatory mites (Acari: Mesostigmata) on tree trunks without significant epiphytic growth in a subtropical rainforest in Eastern Australia were assessed for habitat specificity (i.e. whether they are tree trunk specialists or occupying other habitats) and the influence of host tree and bark structure on their abundance, species richness and species composition. The trunks of nine tree species from eight plant families representing smooth, intermediate and rough bark textures were sampled using a knockdown insecticide spray. In total, 12 species or morphospecies of Mesostigmata (excluding Uropodina sensu stricto) were collected, most of which are undescribed. Comparison with collections from other habitats indicates that epicorticolous Mesostigmata are mainly represented by suspended soil dwellers (six species), secondarily by generalists (four species) and a bark specialist (one species). A typical ground-dwelling species was also found but was represented only by a single individual. In terms of abundance, 50.5% of individuals were suspended soil dwellers, 40.7% bark specialists, and 8.3% generalists. Host species and bark roughness had no significant effect on abundance or species richness. Furthermore, there was no clear effect on species composition. The distribution of the most frequently encountered species suggests that most mesostigmatid mites living on bark use many or most rainforest tree species, independent of bark roughness. These findings support the hypothesis that some epicorticolous Mesostigmata use tree trunks as 'highways' for dispersing between habitat patches, while others use it as a permanent habitat.

A review of placoderm scales, and their significance in placoderm phylogeny

An historical review of the literature relating to placoderm scales preserved in association with articulated dermal plates, or as isolated units in microvertebrate assemblages, is followed by a discussion of their relevance in phylogenetic analyses of the Placodermi. The dentinous tissue forming the tubercles of Early Devonian acanthothoracid scales and dermal bone is similar to that of the dermal bone ornament of some osteostracans, and denticles of the vertebrate Skiichthys from the Ordovician Harding Sandstone. This similarity supports the proposition that the gnathostomes are the sister-group of the Osteostraci, with the Placodermi branching earliest within the gnathostomes, and the Acanthothoraci branching earliest within the Placodermi. The meso-semidentine in acanthothoracid tubercles, rather than semidentine (sensu stricto), is most likely to be synapomorphic for the Placodermi.

(Table 1) Planktonic foraminifera counts and stable oxygen isotope ratios of Pacific Ocean surface sediments

Core-top samples from the eastern tropical Pacific (10°N to 20°S) were used to test whether the ratio between Globorotalia menardii cultrata and Neogloboquadrina dutertrei abundance (Rc/d) and the oxygen isotope composition (?18O) of planktonic foraminifera can be used as proxies for the latitudinal position of the Equatorial Front. Specifically, this study compares the ?18O values of eight species of planktonic foraminifera (Globigerinoides ruber sensu stricto (ss) and sensu lato (sl), Globigerinoides sacculifer, Globigerinoides triloba, Pulleniatina obliquiloculata, Neogloboquadrina dutertrei, Globorotalia menardii menardii, Globorotalia menardii cultrata and Globorotalia tumida) with the seasonal hydrography of the region, and evaluates the application of each species or combination of species for paleoceanographic reconstructions. The results are consistent with sea surface temperature and water column stratification patterns. We found that in samples north of 1°N, the Rc/d values tend to be higher and d18O values of G. ruber, G. sacculifer, G. triloba, P. obliquiloculata, N. dutertrei, and G. menardii cultrata tend to be lower than those from samples located south of 1°N. We suggest that the combined use of Rc/d and the d18O difference between G. ruber and G. tumida or between P. obliquiloculata and G. tumida are the most suitable tools for reconstructing changes in the latitudinal position of the Equatorial Front and changes in the thermal stratification of the upper water column in the eastern tropical Pacific.

(Table 1) Pore-water composition of ODP Leg 126 sites

The Ocean Drilling Program Leg 126 sites may be classified into two categories depending on the presence (Group I: Sites 787, 792, and 793) or absence (Group II: Sites 788, 790, and 791) of steep concentration gradients. Shipboard X-ray diffraction analyses of bulk sediments from Group I sites revealed the presence of a number of diagenetic minerals (some of which are incompatible), but no systematic diagenetic zonation. The results of the chemical analyses of the pore waters from Group I have been used to estimate the activities of dissolved species. Thermodynamic analyses of the composition of the pore waters and the stability of authigenic minerals (gypsum, zeolites, feldspars, smectites, chlorites, and micas) show that the pore waters are close to equilibrium with most of the observed phases. Thus, only a small perturbation of the system (substitution in minerals and fluctuations in pore-water composition, in particular, in pH and SiO2 activity) will cause any of these phases to precipitate. Therefore, one would not expect mineralogical observations to show systematic vertical zonations at these sites. It is suggested that chlorites and high-temperature zeolites are not diagenetic sensu stricto, but were eroded from volcaniclastic highs. The absence of concentration gradients at the Group II sites has been analyzed in terms of reaction kinetics, hydrothermal advection, and temperature distribution. The absence of diagenetic imprints on the pore-water concentration profiles at these sites is probably caused by the slow nucleation of silica phases.

Radiocarbon age, Mg/Ca and d18O measurements on planktonic foraminifera of sediment core GeoB12605-3

The sea surface temperature (SST) of the tropical Indian Ocean is a major component of global climate teleconnections. While the Holocene SST history is documented for regions affected by the Indian and Arabian monsoons, data from the near-equatorial western Indian Ocean are sparse. Reconstructing past zonal and meridional SST gradients requires additional information on past temperatures from the western boundary current region. We present a unique record of Holocene SST and thermocline depth variations in the tropical western Indian Ocean as documented in foraminiferal Mg/Ca ratios and d18O from a sediment core off northern Tanzania. For Mg/Ca and thermocline d18O, most variance is concentrated in the centennial to bicentennial periodicity band. On the millennial time scale, an early to mid-Holocene (~7.8-5.6 ka) warm phase is followed by a temperature drop by up to 2°C, leading to a mid-Holocene cool interval (5.6-4.2 ka). The shift is accompanied by an initial reduction in the difference between surface and thermocline foraminiferal d18O, consistent with the thickening of the mixed layer and suggestions of a strengthened Walker circulation. However, we cannot confirm the expected enhanced zonal SST gradient, as the cooling of similar magnitude had previously been found in SSTs from the upwelling region off Sumatra and in Flores air temperatures. The SST pattern probably reflects the tropical Indian Ocean expression of a large-scale climate anomaly rather than a positive Indian Ocean Dipole-like mean state.

Age model and palaeoclimate records over the past 22,000 years of sediment core GeoB10053-7

The Australian-Indonesian monsoon is an important component of the climate system in the tropical Indo-Pacific region. However, its past variability, relation with northern and southern high-latitude climate and connection to the other Asian monsoon systems are poorly understood. Here we present high-resolution records of monsoon-controlled austral winter upwelling during the past 22,000 years, based on planktic foraminiferal oxygen isotopes and faunal composition in a sedimentary archive collected offshore southern Java. We show that glacial-interglacial variations in the Australian-Indonesian winter monsoon were in phase with the Indian summer monsoon system, consistent with their modern linkage through cross-equatorial surface winds. Likewise, millennial-scale variability of upwelling shares similar sign and timing with upwelling variability in the Arabian Sea. On the basis of element composition and grain-size distribution as precipitation-sensitive proxies in the same archive, we infer that (austral) summer monsoon rainfall was highest during the Bølling-Allerød period and the past 2,500 years. Our results indicate drier conditions during Heinrich Stadial 1 due to a southward shift of summer rainfall and a relatively weak Hadley cell south of the Equator. We suggest that the Australian-Indonesian summer and winter monsoon variability were closely linked to summer insolation and abrupt climate changes in the northern hemisphere.

Planktonic foraminiferal flux and shell geochemistry data in the sediment trap time series JAM 1-3 off south Java

Results from sediment trap experiments conducted in the seasonal upwelling area off south Java from November 2000 until July 2003 revealed significant monsoon-, El Niño-Southern Oscillation-, and Indian Ocean Dipole-induced seasonal and interannual variations in flux and shell geochemistry of planktonic foraminifera. Surface net primary production rates together with total and species-specific planktonic foraminiferal flux rates were highest during the SE monsoon-induced coastal upwelling period from July to October, with three species Globigerina bulloides, Neogloboquadrina pachyderma dex., and Globigerinita glutinata contributing to 40% of the total foraminiferal flux. Shell stable oxygen isotopes (d18O) and Mg/Ca data of Globigerinoides ruber sensu stricto (s.s.), G. ruber sensu lato (s.l.), Neogloboquadrina dutertrei, Pulleniatina obliquiloculata, and Globorotalia menardii in the sediment trap time series recorded surface and subsurface conditions. We infer habitats of 0-30 m for G. ruber at the mixed layer depth, 60-80 m (60-90 m) for P. obliquiloculata (N. dutertrei) at the upper thermocline depth, and 90-110 m (100-150 m) for G. menardii in the 355-500 mm (>500 µm) size fraction corresponding to the (lower) thermocline depth in the study area. Shell Mg/Ca ratio of G. ruber (s.l. and s.s.) reveals an exponential relationship with temperature that agrees with published relationships particularly with the Anand et al. (2003) equations. Flux-weighted foraminiferal data in sediment trap are consistent with average values in surface sediment samples off SW Indonesia. This consistency confirms the excellent potential of these proxies for reconstructing past environmental conditions in this part of the ocean realm.

Cape Lookout cold-water coral area, coral ages and environmental parameters for the last glacial cycle

Climatic and oceanographic changes, as occurring at a glacial-interglacial scale, may alter the environmental conditions needed for the development of prolific cold-water coral reefs and mounds. Studies constraining the temporal distribution of cold-water corals in the NE Atlantic suggested the cyclic changes of the Atlantic Meridional Overturning Circulation as the main driver for the development and dispersal of cold-water coral ecosystems. However, conclusions were hindered by lack of data from the NW Atlantic. Aiming to overcome this lack of data, the temporal occurrence of cold-water corals in the Cape Lookout area along the southeastern US margin was explored by U-series dating. Furthermore, the local influence of the regional water masses, namely the Gulf Stream, on cold-water coral proliferation and occurrence since the Last Glacial Maximum was examined. Results suggest that the occurrence of cold-water corals in the Cape Lookout area is restricted to interglacial periods, with corals being present during the last ~7 kyr and also during the Eemian (~125 ka). The reconstructed local environmental conditions suggest an offshore displacement of the Gulf Stream and increased influence from the Mid-Atlantic Bight shelf waters during the last glacial period. During the deglacial sea level rise, the Gulf Stream moved coastward providing present-day-like conditions to the surface waters. Nevertheless, present-day conditions at the ocean sea floor were not established before 7.5 cal ka BP once the ultimate demise of the Laurentide ice-sheet caused the final sea level rise and the displacement of the Gulf Stream to its present location. Occasional presence of the Gulf Stream over the site during the Mid- to Late Holocene coincides with enhanced bottom current strength and a slightly higher bottom water temperature, which are environmental conditions that are favorable for cold-water coral growth.

Measurement results of d18O, Mg/Ca, and Ti/Ca of sediment cores GeoB10042-1 and GeoB10043-3

The advection of relatively fresh Java Sea water through the Sunda Strait is presently responsible for the low-salinity "tongue" in the eastern tropical Indian Ocean with salinities as low as 32 per mil. The evolution of the hydrologic conditions in the eastern tropical Indian Ocean since the last glacial period, when the Sunda shelf was exposed and any advection via the Sunda Strait was cutoff, and the degree to which these conditions were affected by the Sunda Strait opening are not known. Here we have analyzed two sediment cores (GeoB 10042-1 and GeoB 10043-3) collected from the eastern tropical Indian Ocean off the Sunda Strait that cover the past ~40,000?years. We investigate the magnitude of terrigenous supply, sea surface temperature (SST), and seawater d18O (d18Osw) changes related to the sea level-driven opening of the Sunda Strait. Our new spliced records off the Sunda Strait show that during the last glacial, average SST was cooler and d18Osw was higher than elsewhere in the eastern tropical Indian Ocean. Seawater d18O decreased ~0.5 per mil after the opening of the Sunda Strait at ~10 kyr B.P. accompanied by an SST increase of 1.7°C. We suggest that fresher sea surface conditions have persisted ever since due to a continuous transport of low-salinity Java Sea water into the eastern tropical Indian Ocean via the Sunda Strait that additionally increased marine productivity through the concomitant increase in terrigenous supply.

The identification and differentiation of the Candida parapsilosis complex species by polymerase chain reaction-restriction fragment length polymorphism of the internal transcribed spacer region of the rDNA

Currently, it is accepted that there are three species that were formerly grouped under Candida parapsilosis : C. parapsilosis sensu stricto, Candida orthopsilosis , and Candida metapsilosis . In fact, the antifungal susceptibility profiles and distinct virulence attributes demonstrate the differences in these nosocomial pathogens. An accurate, fast, and economical identification of fungal species has been the main goal in mycology. In the present study, we searched sequences that were available in the GenBank database in order to identify the complete sequence for the internal transcribed spacer (ITS)1-5.8S-ITS2 region, which is comprised of the forward and reverse primers ITS1 and ITS4. Subsequently, an in silico polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) was performed to differentiate the C. parapsilosis complex species. Ninety-eight clinical isolates from patients with fungaemia were submitted for analysis, where 59 isolates were identified as C. parapsilosis sensu stricto, 37 were identified as C. orthopsilosis, and two were identified as C. metapsilosis. PCR-RFLP quickly and accurately identified C. parapsilosis complex species, making this method an alternative and routine identification system for use in clinical mycology laboratories.

Description of a new species of the miniopterus aelleni group (chiroptera: miniopteridae) from upland areas of central and northern Madagascar

Recent molecular genetic work, combined with morphological comparisons, on Malagasy members of the bat genus Miniopterus (Family Miniopteridae), has uncovered a number of cryptic species. Based on recently collected specimens and associated tissues, we examine patterns of variation in M. aelleni, the holotype of which comes from Ankarana in northern Madagascar. Using molecular genetic (mitochondrial cytochrome b) and morphological characters we describe a new species, M. ambohitrensis sp. nov. In northern Madagascar, M. ambohitrensis and M. aelleni are allopatric, but occur in relatively close geographical contact (approximately 40 km direct line distance) with M. ambohitrensis found at Montagne d'Ambre in montane humid forest and M. aelleni sensu stricto at Ankarana in dry deciduous forest. Morphologically, this new taxon is differentiated from M. aelleni based on pelage coloration, external measurements, craniodental differences, and tragus shape. Comparisons using 725 bp of cytochrome b found a divergence of 1.1% within M. aelleni sensu stricto, 0.8% within M. ambohitrensis, and 3.3% between these two clades. The two sister species do not demonstrate acoustical differences based on recordings made in a flight cage. Miniopterus ambohitrensis is known from four localities in the northern and central portions of Madagascar, all from montane regions and across an elevational range from about 800 to 1600 m; its calculated "Extent of occurrence" is 15,143 km². It is possible that this species is at least partially migratory.